November 2015 - galaxy-commits - lists.galaxyproject.org

[galaxyproject/infrastructure-playbook] c77875: Update common roles
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/infrastructure-playbook Commit: c77875df48b1416c2e4d6b930365ae5224b6a865 https://github.com/galaxyproject/infrastructure-playbook/commit/c77875df48b… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-05 (Thu, 05 Nov 2015) Changed paths: M common_roles Log Message: ----------- Update common roles Commit: 4f4646c9b1494a1bc62f80773d88cda51201b609 https://github.com/galaxyproject/infrastructure-playbook/commit/4f4646c9b14… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-05 (Thu, 05 Nov 2015) Changed paths: A galaxyenv/group_vars/starforgebuilders.yml R galaxyenv/host_vars/mjolnir0.galaxyproject.org.yml M galaxyenv/inventory Log Message: ----------- Install docker on starforge builder Compare: https://github.com/galaxyproject/infrastructure-playbook/compare/bde9fa7aea…

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[galaxyproject/infrastructure-playbook] bde9fa: Use pam_mkhomedir if using ldap and an alternate h...
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/infrastructure-playbook Commit: bde9fa7aea45f6f30726ccdab12f314f9f63e809 https://github.com/galaxyproject/infrastructure-playbook/commit/bde9fa7aea4… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-05 (Thu, 05 Nov 2015) Changed paths: M galaxyenv/host_vars/mjolnir0.galaxyproject.org.yml A roles/ldap/files/pam-config-mkhomedir M roles/ldap/handlers/main.yml M roles/ldap/tasks/nss.yml Log Message: ----------- Use pam_mkhomedir if using ldap and an alternate home directory is specified

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[galaxyproject/infrastructure-playbook] 2115d6: Update common roles and adjust for changed apt_rep...
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/infrastructure-playbook Commit: 2115d6f4e69a392e0fb3bb82b96396ede4d02bc1 https://github.com/galaxyproject/infrastructure-playbook/commit/2115d6f4e69… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M common_roles M galaxyenv/host_vars/n2.galaxyproject.org.yml Log Message: ----------- Update common roles and adjust for changed apt_repository format Commit: 2d8dbb4bc0513bd2fa0b8b97ec533eeadb7c60f9 https://github.com/galaxyproject/infrastructure-playbook/commit/2d8dbb4bc05… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M common_roles Log Message: ----------- Update common roles again Compare: https://github.com/galaxyproject/infrastructure-playbook/compare/d6751dc6b5…

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[galaxyproject/infrastructure-playbook] d6751d: Bring the kerberos, ldap, and nfs roles over from ...
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/infrastructure-playbook Commit: d6751dc6b5e6eb1fea81689ca7a66a709d562ffc https://github.com/galaxyproject/infrastructure-playbook/commit/d6751dc6b5e… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M galaxyenv/group_vars/baseenv.yml A galaxyenv/group_vars/liteenv.yml M galaxyenv/host_vars/mjolnir0.galaxyproject.org.yml M galaxyenv/inventory M playbook.yml A roles/kerberos/defaults/main.yml A roles/kerberos/tasks/auth.yml A roles/kerberos/tasks/k5login.yml A roles/kerberos/tasks/main.yml A roles/kerberos/templates/krb5.conf.j2 A roles/ldap/files/debian-nsswitch.conf A roles/ldap/handlers/main.yml A roles/ldap/tasks/main.yml A roles/ldap/tasks/nss.yml A roles/ldap/templates/ldap.conf.j2 A roles/ldap/vars/debian_family.yml A roles/ldap/vars/default.yml A roles/ldap/vars/ubuntu.yml A roles/nfs/defaults/main.yml A roles/nfs/files/default-nfs-common A roles/nfs/handlers/main.yml A roles/nfs/tasks/ldap.yml A roles/nfs/tasks/main.yml A roles/nfs/templates/default-autofs.j2 A roles/nfs/templates/idmapd.conf.j2 Log Message: ----------- Bring the kerberos, ldap, and nfs roles over from the private playbook and combine them into a "lite" env for galaxy hosts that does the auth and ldap stuff but without afs. Make mjolnir0 use the lite env.

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[galaxyproject/usegalaxy-playbook] 5e9e49: Readme formatting
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 5e9e49fcd98c1aa2b5bfd2071fe015bc64084846 https://github.com/galaxyproject/usegalaxy-playbook/commit/5e9e49fcd98c1aa2… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M README.md Log Message: ----------- Readme formatting

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[galaxyproject/usegalaxy-playbook] eec6b5: Add instructions on how to restart Galaxy Test aft...
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: eec6b5ce1909efc3ae2fa1aa1287035603134307 https://github.com/galaxyproject/usegalaxy-playbook/commit/eec6b5ce1909efc3… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M README.md Log Message: ----------- Add instructions on how to restart Galaxy Test after an update.

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[galaxyproject/usegalaxy-playbook] f36a35: Add sanitize_whitelist for both servers in mutable...
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: f36a35849b6213d134156dfc7f2741a207fa9c54 https://github.com/galaxyproject/usegalaxy-playbook/commit/f36a35849b6213d1… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M stage/group_vars/galaxyservers.yml Log Message: ----------- Add sanitize_whitelist for both servers in mutable configs.

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[galaxyproject/usegalaxy-playbook] 24d737: Mutable configs.
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 24d737b54cfdad8038760704dac68fb7509833b4 https://github.com/galaxyproject/usegalaxy-playbook/commit/24d737b54cfdad80… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_conf.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_data_table_conf.xml Log Message: ----------- Mutable configs.

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[galaxyproject/usegalaxy-playbook] dcb302: Fix copypasta.
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: dcb3023ba8390105c1eca869c3be4958fd40036d https://github.com/galaxyproject/usegalaxy-playbook/commit/dcb3023ba8390105… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M production/group_vars/galaxyservers.yml Log Message: ----------- Fix copypasta.

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[galaxyproject/usegalaxy-playbook] 818b92: Add sanitize_whitelist files to mutable configs.
by GitHub 04 Nov '15

04 Nov '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 818b9203aced5ea74568b6c00c39f79abda2c7cb https://github.com/galaxyproject/usegalaxy-playbook/commit/818b9203aced5ea7… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-11-04 (Wed, 04 Nov 2015) Changed paths: M production/group_vars/galaxyservers.yml Log Message: ----------- Add sanitize_whitelist files to mutable configs.

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