December 2015 - galaxy-commits - lists.galaxyproject.org

[galaxyproject/galaxy] 952f3f: Open select2 dropdown on click
by GitHub 11 Dec '15

11 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 952f3f9b7a04a6e7d3185da76d84dea0fa9bca8d https://github.com/galaxyproject/galaxy/commit/952f3f9b7a04a6e7d3185da76d84… Author: guerler <aysam.guerler(a)gmail.com> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M client/galaxy/scripts/mvc/ui/ui-select-default.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-select-default.js M static/style/blue/base.css Log Message: ----------- Open select2 dropdown on click Commit: bca004eff8607e347d440ce5fc5d086d7acb45f9 https://github.com/galaxyproject/galaxy/commit/bca004eff8607e347d440ce5fc5d… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M client/galaxy/scripts/mvc/ui/ui-select-default.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-select-default.js M static/style/blue/base.css Log Message: ----------- Merge pull request #1298 from guerler/fix_select2_open_000 Open select2 drop down on caret click Compare: https://github.com/galaxyproject/galaxy/compare/f8d95abf0616...bca004eff860

1 0

[galaxyproject/galaxy] 833459: Fixes for dataset 'cleanup'/association linking wh...
by GitHub 11 Dec '15

11 Dec '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/galaxy Commit: 8334593de11e915389b1da58c3b5db26121c7bef https://github.com/galaxyproject/galaxy/commit/8334593de11e915389b1da58c3b5… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M lib/galaxy/workflow/extract.py Log Message: ----------- Fixes for dataset 'cleanup'/association linking when extracting workflows from a history. Commit: 7923360dcec48b2e98d7c2a5bcae5f47187d6bf6 https://github.com/galaxyproject/galaxy/commit/7923360dcec48b2e98d7c2a5bcae… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: M lib/galaxy/tools/actions/__init__.py M test/api/test_tools.py Log Message: ----------- "Fix" collection outputs to hide the HDAs in the history. Long term this is just not a solution, but it is the strategy we use for mapped over output HDAs also. Rebased and fixed based on comments from @nsoranzo indicating the previous attempt did absolutely nothing to fix the problem. xref https://github.com/galaxyproject/tools-iuc/pull/412/files Commit: 41a56ead749bd25c6bc46107201b0e62bb65af9a https://github.com/galaxyproject/galaxy/commit/41a56ead749bd25c6bc46107201b… Author: carlfeberhard <carlfeberhard(a)gmail.com> Date: 2015-12-07 (Mon, 07 Dec 2015) Changed paths: M client/galaxy/scripts/mvc/collection/list-collection-creator.js M static/maps/mvc/collection/list-collection-creator.js.map M static/scripts/mvc/collection/list-collection-creator.js Log Message: ----------- Fix list collection creator being cutoff by restoring height: 100% Commit: 94b049926d844a8aa54017b6d7a9983b94203316 https://github.com/galaxyproject/galaxy/commit/94b049926d844a8aa54017b6d7a9… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-08 (Tue, 08 Dec 2015) Changed paths: M client/galaxy/scripts/mvc/collection/list-collection-creator.js M static/maps/mvc/collection/list-collection-creator.js.map M static/scripts/mvc/collection/list-collection-creator.js Log Message: ----------- Merge pull request #1258 from carlfeberhard/release_15.10 [15.10] Fix list collection creator being cutoff by restoring height: 100% Commit: 2be17071f35bb5db2298883aff107134a53701d1 https://github.com/galaxyproject/galaxy/commit/2be17071f35bb5db2298883aff10… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-08 (Tue, 08 Dec 2015) Changed paths: M lib/galaxy/workflow/extract.py Log Message: ----------- Merge pull request #1228 from blankenberg/wf_extrac_15.10 [15.10] Fixes for dataset 'cleanup'/association linking when extracting workflows from a history. Commit: 0d98cf8ab76a374362302547b5699fa024d5ce21 https://github.com/galaxyproject/galaxy/commit/0d98cf8ab76a374362302547b569… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2015-12-09 (Wed, 09 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Log a warning for missing tool whitelist file only if explicitly defined. Also fix the log message. Commit: a9034b5df3f3c80144727ebc161caa38b64ba7a1 https://github.com/galaxyproject/galaxy/commit/a9034b5df3f3c80144727ebc161c… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-12-09 (Wed, 09 Dec 2015) Changed paths: M eggs.ini Log Message: ----------- Update Kombu and AMQP eggs to fix problems with El Capitan's System Integrity Protection. Commit: b6e7b9a33b5dec7fdad2ad2f863bbf88980626ec https://github.com/galaxyproject/galaxy/commit/b6e7b9a33b5dec7fdad2ad2f863b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Adjustments to sanitize_whitelist reloading. Commit: 2835aead8f949e3ac8b5c2ece0dc00c872950bde https://github.com/galaxyproject/galaxy/commit/2835aead8f949e3ac8b5c2ece0dc… Author: Nicola Soranzo <nsoranzo(a)tiscali.it> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Merge pull request #2 from dannon/release_15.10_config Adjustments to sanitize_whitelist reloading. Commit: f13e9298de2eba4bee36ecb8336477a63345294b https://github.com/galaxyproject/galaxy/commit/f13e9298de2eba4bee36ecb83364… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Merge pull request #1278 from nsoranzo/release_15.10_config [15.10] Log a warning for missing tool whitelist file only if explicitly defined. Commit: fba354cb87754450ac41e58252dd405ac073557d https://github.com/galaxyproject/galaxy/commit/fba354cb87754450ac41e58252dd… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M eggs.ini Log Message: ----------- Merge pull request #1282 from natefoo/kombu-el-cap [15.10] Update Kombu and AMQP eggs to fix problems with El Capitan's System Integrity Protection Commit: 6a47d2d3a7f27b659e5de5fb1b37c7c1f9d04302 https://github.com/galaxyproject/galaxy/commit/6a47d2d3a7f27b659e5de5fb1b37… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/tools/actions/__init__.py M test/api/test_tools.py Log Message: ----------- Merge pull request #1239 from jmchilton/collection_outputs_hidden [15.10] "Fix" collection outputs to hide the HDAs in the history. Compare: https://github.com/galaxyproject/galaxy/compare/7d4eac1535fc...6a47d2d3a7f2

1 0

[galaxyproject/galaxy] a22c09: Fix typos.
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: a22c09b11f5a16b4c429cf88ebd74faa433da97c https://github.com/galaxyproject/galaxy/commit/a22c09b11f5a16b4c429cf88ebd7… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2015-12-08 (Tue, 08 Dec 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/tag_handler.py M test/docker/base/Dockerfile M test/tool_shed/functional/test_1460_data_managers.py Log Message: ----------- Fix typos. Commit: f974b0f740d4ed8c44ebafde74908cdea1748a1a https://github.com/galaxyproject/galaxy/commit/f974b0f740d4ed8c44ebafde7490… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2015-12-08 (Tue, 08 Dec 2015) Changed paths: M lib/tool_shed/galaxy_install/install_manager.py M lib/tool_shed/galaxy_install/repair_repository_manager.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/install_environment.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/tag_handler.py M lib/tool_shed/util/tool_dependency_util.py Log Message: ----------- Extend the logging of tool dependency status changes. Also merge handle_tool_dependency_installation_error() in set_tool_dependency_attributes() and consolidate its use. Commit: f8d95abf061608e2dc544e56fc5b83ad3d54d1bd https://github.com/galaxyproject/galaxy/commit/f8d95abf061608e2dc544e56fc5b… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py M lib/tool_shed/galaxy_install/install_manager.py M lib/tool_shed/galaxy_install/repair_repository_manager.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/install_environment.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py M lib/tool_shed/galaxy_install/tool_dependencies/recipe/tag_handler.py M lib/tool_shed/util/tool_dependency_util.py M test/docker/base/Dockerfile M test/tool_shed/functional/test_1460_data_managers.py Log Message: ----------- Merge pull request #1263 from nsoranzo/dev_tool_shed_fixes Extend the logging of tool dependency status changes. Compare: https://github.com/galaxyproject/galaxy/compare/b455157bd6f3...f8d95abf0616

1 0

[galaxyproject/galaxy] 792336: "Fix" collection outputs to hide the HDAs in the h...
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/release_15.10 Home: https://github.com/galaxyproject/galaxy Commit: 7923360dcec48b2e98d7c2a5bcae5f47187d6bf6 https://github.com/galaxyproject/galaxy/commit/7923360dcec48b2e98d7c2a5bcae… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: M lib/galaxy/tools/actions/__init__.py M test/api/test_tools.py Log Message: ----------- "Fix" collection outputs to hide the HDAs in the history. Long term this is just not a solution, but it is the strategy we use for mapped over output HDAs also. Rebased and fixed based on comments from @nsoranzo indicating the previous attempt did absolutely nothing to fix the problem. xref https://github.com/galaxyproject/tools-iuc/pull/412/files Commit: 6a47d2d3a7f27b659e5de5fb1b37c7c1f9d04302 https://github.com/galaxyproject/galaxy/commit/6a47d2d3a7f27b659e5de5fb1b37… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/tools/actions/__init__.py M test/api/test_tools.py Log Message: ----------- Merge pull request #1239 from jmchilton/collection_outputs_hidden [15.10] "Fix" collection outputs to hide the HDAs in the history. Compare: https://github.com/galaxyproject/galaxy/compare/fba354cb8775...6a47d2d3a7f2

1 0

[galaxyproject/galaxy] bb2370: White space in BIOM1 datatype.
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: bb23701fa80c74a6621b1826b050d9e42c12455f https://github.com/galaxyproject/galaxy/commit/bb23701fa80c74a6621b1826b050… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-01 (Tue, 01 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- White space in BIOM1 datatype. Commit: 64506bbd43e21b299a8b42ee3cfd2ef8e40c06d2 https://github.com/galaxyproject/galaxy/commit/64506bbd43e21b299a8b42ee3cfd… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-01 (Tue, 01 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Prevent unneccessary extra read in BIOM1 sniffer. Commit: b5c77a8e8c0255f61ca62a7ff2311d443e224bec https://github.com/galaxyproject/galaxy/commit/b5c77a8e8c0255f61ca62a7ff231… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-01 (Tue, 01 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Add metadata for BIOM1 datatype. I am not yet sure that we should store table_rows and table_columns, as these could grow quite large, but could be useful in tools. Commit: f41540f6137a2f63a6dcb27327e33bf73752f954 https://github.com/galaxyproject/galaxy/commit/f41540f6137a2f63a6dcb27327e3… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-01 (Tue, 01 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Most of these should probably not be user visible. Commit: b20fb71e33c1779e42dd67bb68aa9b31b69ffca2 https://github.com/galaxyproject/galaxy/commit/b20fb71e33c1779e42dd67bb68aa… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-01 (Tue, 01 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Fix extraneous white space. Commit: 2c6c5236323dbea196cfd2e8fe3915f0c7e4c6df https://github.com/galaxyproject/galaxy/commit/2c6c5236323dbea196cfd2e8fe39… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-02 (Wed, 02 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Only store ids for row and column in BIOM1 datatype. Commit: 3acfa9c786e1fa5567cf313b294b68ab4c508c1b https://github.com/galaxyproject/galaxy/commit/3acfa9c786e1fa5567cf313b294b… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-12-02 (Wed, 02 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Add blank lines around internal function. Commit: b455157bd6f3f23ce2de81d5145b6268e4da77f3 https://github.com/galaxyproject/galaxy/commit/b455157bd6f3f23ce2de81d5145b… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/datatypes/text.py Log Message: ----------- Merge pull request #1198 from blankenberg/dt-biom BIOM1 Datatype enhancements Compare: https://github.com/galaxyproject/galaxy/compare/7a3aa044fbf9...b455157bd6f3

1 0

[galaxyproject/galaxy] a0c7d8: Ease the grunt uglify process
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: a0c7d87db35133c2a81d54766f0e718d7fe5f766 https://github.com/galaxyproject/galaxy/commit/a0c7d87db35133c2a81d54766f0e… Author: Eric Rasche <rasche.eric(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: A Makefile A client/.docker-build.sh A client/Dockerfile M doc/source/dev/faq.rst Log Message: ----------- Ease the grunt uglify process Commit: 7cf98d32d811fbf9c8b64f72334c4f4c1e502882 https://github.com/galaxyproject/galaxy/commit/7cf98d32d811fbf9c8b64f72334c… Author: Eric Rasche <rasche.eric(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: M doc/source/dev/faq.rst Log Message: ----------- Align opinions with @jmchilton Commit: 1295f985106a9440135e139368a708ef8dcc0538 https://github.com/galaxyproject/galaxy/commit/1295f985106a9440135e139368a7… Author: Eric Rasche <rasche.eric(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: M Makefile Log Message: ----------- Rename docker image Commit: 0fec39d3bd323b203d6221f087ccac8014c3fefc https://github.com/galaxyproject/galaxy/commit/0fec39d3bd323b203d6221f087cc… Author: Eric Rasche <rasche.eric(a)gmail.com> Date: 2015-12-04 (Fri, 04 Dec 2015) Changed paths: M client/Dockerfile Log Message: ----------- Less insane build recipe if it's included in the repo Commit: 7a3aa044fbf968c120832402091cb3b1d70afd7b https://github.com/galaxyproject/galaxy/commit/7a3aa044fbf968c120832402091c… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: A Makefile A client/.docker-build.sh A client/Dockerfile M doc/source/dev/faq.rst Log Message: ----------- Merge pull request #1238 from erasche/client-builder Ease the grunt uglify process Compare: https://github.com/galaxyproject/galaxy/compare/25f420fc8f47...7a3aa044fbf9

1 0

[galaxyproject/galaxy] 1ebc0e: UI, Quotameter: correctly update the quotameter fo...
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 1ebc0ea9e719bf7557f0e190a7dd4883629257f5 https://github.com/galaxyproject/galaxy/commit/1ebc0ea9e719bf7557f0e190a7dd… Author: carlfeberhard <carlfeberhard(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M client/galaxy/scripts/apps/analysis.js M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map Log Message: ----------- UI, Quotameter: correctly update the quotameter for anon users Commit: 25f420fc8f47865e2cee2da15dc283e2cf130b91 https://github.com/galaxyproject/galaxy/commit/25f420fc8f47865e2cee2da15dc2… Author: Aysam Guerler <aysam.guerler(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M client/galaxy/scripts/apps/analysis.js M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map Log Message: ----------- Merge pull request #1289 from carlfeberhard/fix.anon-user-quotameter UI, Quotameter: correctly update the quotameter for anon users Compare: https://github.com/galaxyproject/galaxy/compare/bce8140bd9f9...25f420fc8f47

1 0

[galaxyproject/galaxy] a9034b: Update Kombu and AMQP eggs to fix problems with El...
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/release_15.10 Home: https://github.com/galaxyproject/galaxy Commit: a9034b5df3f3c80144727ebc161caa38b64ba7a1 https://github.com/galaxyproject/galaxy/commit/a9034b5df3f3c80144727ebc161c… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-12-09 (Wed, 09 Dec 2015) Changed paths: M eggs.ini Log Message: ----------- Update Kombu and AMQP eggs to fix problems with El Capitan's System Integrity Protection. Commit: fba354cb87754450ac41e58252dd405ac073557d https://github.com/galaxyproject/galaxy/commit/fba354cb87754450ac41e58252dd… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M eggs.ini Log Message: ----------- Merge pull request #1282 from natefoo/kombu-el-cap [15.10] Update Kombu and AMQP eggs to fix problems with El Capitan's System Integrity Protection Compare: https://github.com/galaxyproject/galaxy/compare/f13e9298de2e...fba354cb8775

1 0

[galaxyproject/galaxy] 0d98cf: Log a warning for missing tool whitelist file only...
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/release_15.10 Home: https://github.com/galaxyproject/galaxy Commit: 0d98cf8ab76a374362302547b5699fa024d5ce21 https://github.com/galaxyproject/galaxy/commit/0d98cf8ab76a374362302547b569… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2015-12-09 (Wed, 09 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Log a warning for missing tool whitelist file only if explicitly defined. Also fix the log message. Commit: b6e7b9a33b5dec7fdad2ad2f863bbf88980626ec https://github.com/galaxyproject/galaxy/commit/b6e7b9a33b5dec7fdad2ad2f863b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Adjustments to sanitize_whitelist reloading. Commit: 2835aead8f949e3ac8b5c2ece0dc00c872950bde https://github.com/galaxyproject/galaxy/commit/2835aead8f949e3ac8b5c2ece0dc… Author: Nicola Soranzo <nsoranzo(a)tiscali.it> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Merge pull request #2 from dannon/release_15.10_config Adjustments to sanitize_whitelist reloading. Commit: f13e9298de2eba4bee36ecb8336477a63345294b https://github.com/galaxyproject/galaxy/commit/f13e9298de2eba4bee36ecb83364… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M lib/galaxy/config.py Log Message: ----------- Merge pull request #1278 from nsoranzo/release_15.10_config [15.10] Log a warning for missing tool whitelist file only if explicitly defined. Compare: https://github.com/galaxyproject/galaxy/compare/2be17071f35b...f13e9298de2e

1 0

[galaxyproject/galaxy] 133e5f: Various small API testing fixes/improvements.
by GitHub 10 Dec '15

10 Dec '15

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 133e5f2e24eed9650a0862ced42092d35f8a6566 https://github.com/galaxyproject/galaxy/commit/133e5f2e24eed9650a0862ced420… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M test/api/test_tools.py M test/api/test_workflows.py M test/base/interactor.py Log Message: ----------- Various small API testing fixes/improvements. Commit: 09a68adb1e2a837f4ae01ca9ec25b4d6d0fab446 https://github.com/galaxyproject/galaxy/commit/09a68adb1e2a837f4ae01ca9ec25… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M test/api/test_workflows.py Log Message: ----------- Add another API test verifying validation of workflow substitions. A little different because it targets a different tool, validation, and is inside a repeat. Commit: 928ff581efa3ace63a57e97db80e7a9c21c09841 https://github.com/galaxyproject/galaxy/commit/928ff581efa3ace63a57e97db80e… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M test/base/interactor.py Log Message: ----------- Fix typo spotted by @nsoranzo. Commit: bce8140bd9f9c3e069c83f765ae892d0fd1656b7 https://github.com/galaxyproject/galaxy/commit/bce8140bd9f9c3e069c83f765ae8… Author: Nicola Soranzo <nsoranzo(a)tiscali.it> Date: 2015-12-10 (Thu, 10 Dec 2015) Changed paths: M test/api/test_tools.py M test/api/test_workflows.py M test/base/interactor.py Log Message: ----------- Merge pull request #1285 from jmchilton/test_improvemnts_1 Small API Test Improvements Compare: https://github.com/galaxyproject/galaxy/compare/183c3c11b60a...bce8140bd9f9

1 0