Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 249d185d88bfdca668ca08775ef8c93bef34557c
https://github.com/galaxyproject/galaxy/commit/249d185d88bfdca668ca08775ef8…
Author: Dave B <dave(a)bx.psu.edu>
Date: 2015-08-11 (Tue, 11 Aug 2015)
Changed paths:
M lib/tool_shed/capsule/capsule_manager.py
M lib/tool_shed/dependencies/tool/tag_attribute_handler.py
M lib/tool_shed/galaxy_install/install_manager.py
M lib/tool_shed/grids/repository_grids.py
Log Message:
-----------
Minor cleanup of some iterators.
Commit: 5885ce870e4b42b94be9115180880b7e2a1c96db
https://github.com/galaxyproject/galaxy/commit/5885ce870e4b42b94be911518088…
Author: Dave B <dave(a)bx.psu.edu>
Date: 2015-08-11 (Tue, 11 Aug 2015)
Changed paths:
M lib/tool_shed/grids/repository_grids.py
Log Message:
-----------
Address Nicola's concerns.
Commit: db4461177162fae94b2100363d3e617c213d09df
https://github.com/galaxyproject/galaxy/commit/db4461177162fae94b2100363d3e…
Author: Martin Cech <cech.marten(a)gmail.com>
Date: 2015-08-11 (Tue, 11 Aug 2015)
Changed paths:
M lib/tool_shed/capsule/capsule_manager.py
M lib/tool_shed/dependencies/tool/tag_attribute_handler.py
M lib/tool_shed/galaxy_install/install_manager.py
M lib/tool_shed/grids/repository_grids.py
Log Message:
-----------
Merge pull request #589 from davebx/cleanup_ts
Minor cleanup of some iterators.
Compare: https://github.com/galaxyproject/galaxy/compare/a04147dc56cc...db4461177162
Branch: refs/heads/master
Home: https://github.com/galaxyproject/infrastructure-playbook
Commit: 229feae52598cc3a09fbe9ac6830c05063823b6e
https://github.com/galaxyproject/infrastructure-playbook/commit/229feae5259…
Author: Nate Coraor <nate(a)bx.psu.edu>
Date: 2015-08-11 (Tue, 11 Aug 2015)
Changed paths:
A roles/mailman/files/default-spamassassin
A roles/mailman/files/mm_discard_report.py
A roles/mailman/handlers/main.yml
A roles/mailman/meta/main.yml
A roles/mailman/tasks/main.yml
A roles/mailman/templates/mailman.ini.j2
A roles/mailman/templates/mm_cfg.py.j2
A roles/mailman/templates/mm_genaliases_ldap.j2
A roles/postfix/defaults/main.yml
A roles/postfix/handlers/main.yml
A roles/postfix/tasks/main.yml
A roles/postfix/tasks/mx.yml
A roles/postfix/tasks/relay.yml
A roles/postfix/templates/15-content_filter_mode.j2
A roles/postfix/templates/50-user.j2
A roles/postfix/templates/ldap-aliases.cf.j2
A roles/postfix/templates/ldap-lists.cf.j2
A roles/postfix/templates/ldap-local.cf.j2
A roles/postfix/templates/local.cf.j2
A roles/postfix/templates/mailer.conf.j2
A roles/postfix/templates/main.cf.j2
A roles/postfix/templates/master.cf.j2
A roles/postfix/vars/default.yml
A roles/postfix/vars/smartos.yml
Log Message:
-----------
Fix mail on SmartOS (non-GZ, anyway). As a result, bring the postfix and
mailman roles over from the private playbook.
So far, putting almost everything in a single play seems to be working
out well. The only downside here is that as more stuff is added, there
will be a *lot* of skipped tasks.
Commit: 5f2cd8c675fa3659788f83dcd8d20689b1806b9a
https://github.com/galaxyproject/infrastructure-playbook/commit/5f2cd8c675f…
Author: Nate Coraor <nate(a)bx.psu.edu>
Date: 2015-08-11 (Tue, 11 Aug 2015)
Changed paths:
M galaxyenv/group_vars/all.yml
A galaxyenv/group_vars/listservers.yml
A galaxyenv/group_vars/mailservers.yml
A galaxyenv/host_vars/chouffe.galaxyproject.org.yml
A galaxyenv/host_vars/delirium.galaxyproject.org.yml
M galaxyenv/inventory
M playbook.yml
Log Message:
-----------
Data for the previously added postfix and mailman roles.
Compare: https://github.com/galaxyproject/infrastructure-playbook/compare/b04320d9c6…
Branch: refs/heads/master
Home: https://github.com/galaxyproject/usegalaxy-playbook
Commit: e22a25d404ed6dd749c30adc4ff3da775130e7ed
https://github.com/galaxyproject/usegalaxy-playbook/commit/e22a25d404ed6dd7…
Author: Nate Coraor <nate(a)bx.psu.edu>
Date: 2015-08-10 (Mon, 10 Aug 2015)
Changed paths:
M roles/galaxyprojectdotorg.postgresql/meta/.galaxy_install_info
M roles/galaxyprojectdotorg.postgresql/templates/archive_wal.sh.j2
M roles/galaxyprojectdotorg.postgresql/templates/backup_working_wal.sh.j2
M roles/galaxyprojectdotorg.postgresql/templates/scheduled_backup.sh.j2
Log Message:
-----------
Update to postgresql role version 0.9.2
Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: ee4f077c526dbda7752baef59d97b671b9effac6
https://github.com/galaxyproject/galaxy/commit/ee4f077c526dbda7752baef59d97…
Author: Dannon Baker <dannon.baker(a)gmail.com>
Date: 2015-08-10 (Mon, 10 Aug 2015)
Changed paths:
M tool-data/all_fasta.loc.sample
M tool-data/faseq.loc.sample
M tool-data/liftOver.loc.sample
M tool-data/mosaik_index.loc.sample
M tool-data/ngs_sim_fasta.loc.sample
M tool-data/perm_base_index.loc.sample
M tool-data/perm_color_index.loc.sample
M tool-data/picard_index.loc.sample
M tool-data/regions.loc.sample
M tool-data/srma_index.loc.sample
Log Message:
-----------
Per @yhoogstrate's suggestion https://github.com/galaxyproject/galaxy/commit/c0c286a9c69dcb23a50a0b9b249c…, retab .loc.samples
Commit: a04147dc56cc747c67aeacc1773b5bb747347957
https://github.com/galaxyproject/galaxy/commit/a04147dc56cc747c67aeacc1773b…
Author: Nitesh Turaga <nitesh.turaga(a)gmail.com>
Date: 2015-08-10 (Mon, 10 Aug 2015)
Changed paths:
M tool-data/all_fasta.loc.sample
M tool-data/faseq.loc.sample
M tool-data/liftOver.loc.sample
M tool-data/mosaik_index.loc.sample
M tool-data/ngs_sim_fasta.loc.sample
M tool-data/perm_base_index.loc.sample
M tool-data/perm_color_index.loc.sample
M tool-data/picard_index.loc.sample
M tool-data/regions.loc.sample
M tool-data/srma_index.loc.sample
Log Message:
-----------
Merge pull request #587 from dannon/retab_loc_samples
Retab .loc.samples
Compare: https://github.com/galaxyproject/galaxy/compare/7baab04081cb...a04147dc56cc
Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 524fd95ca6764dfde58b1d047474b2d3afad1e9b
https://github.com/galaxyproject/galaxy/commit/524fd95ca6764dfde58b1d047474…
Author: Martin Cech <cech.marten(a)gmail.com>
Date: 2015-08-10 (Mon, 10 Aug 2015)
Changed paths:
R static/help.css
R static/help.html
R static/help.rst
R static/images/SetAttr.png
R static/images/SetGenome.png
R static/images/brochure.pdf
R static/images/galaxy.png
R static/images/galaxyLogo_small.png
R static/images/lock.jpg
R static/images/qk/quickie1_small.png
R static/images/qk/quickie2_small.png
R static/images/qk/quickie3_small.png
R static/images/qk/quickie4_small.png
R static/images/qk/quickie5_small.png
R static/images/qk/quickie6_small.png
R static/images/qk/quickie7_small.png
R static/images/screencast.png
R static/images/sequencer.png
R static/images/tools.gif
R static/images/toolsExpandingMenu.gif
R static/images/welcomePhoto.jpg
R static/welcome.rst
Log Message:
-----------
remove undused files
Commit: 7baab04081cbc6a280443ff967a1f69e8ec721d8
https://github.com/galaxyproject/galaxy/commit/7baab04081cbc6a280443ff967a1…
Author: Dannon Baker <dannon.baker(a)gmail.com>
Date: 2015-08-10 (Mon, 10 Aug 2015)
Changed paths:
R static/help.css
R static/help.html
R static/help.rst
R static/images/SetAttr.png
R static/images/SetGenome.png
R static/images/brochure.pdf
R static/images/galaxy.png
R static/images/galaxyLogo_small.png
R static/images/lock.jpg
R static/images/qk/quickie1_small.png
R static/images/qk/quickie2_small.png
R static/images/qk/quickie3_small.png
R static/images/qk/quickie4_small.png
R static/images/qk/quickie5_small.png
R static/images/qk/quickie6_small.png
R static/images/qk/quickie7_small.png
R static/images/screencast.png
R static/images/sequencer.png
R static/images/tools.gif
R static/images/toolsExpandingMenu.gif
R static/images/welcomePhoto.jpg
R static/welcome.rst
Log Message:
-----------
Merge pull request #583 from martenson/cleanup-static
remove unused files in /static
Compare: https://github.com/galaxyproject/galaxy/compare/fc6b965bba06...7baab04081cb