November 2017 - galaxy-commits - lists.galaxyproject.org

[galaxyproject/galaxy] 493c3e: Fix initialization of named ajax queue
by GitHub 12 Nov '17

12 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 493c3e6475094628b2b35f752b065b469ee5130b https://github.com/galaxyproject/galaxy/commit/493c3e6475094628b2b35f752b06… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-11 (Sat, 11 Nov 2017) Changed paths: M client/galaxy/scripts/utils/ajax-queue.js M static/maps/utils/ajax-queue.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/utils/ajax-queue.js Log Message: ----------- Fix initialization of named ajax queue Commit: c7ef71dfc9dff5f6650b3ddeeb88ab9734c76076 https://github.com/galaxyproject/galaxy/commit/c7ef71dfc9dff5f6650b3ddeeb88… Author: Marius van den Beek <m.vandenbeek(a)gmail.com> Date: 2017-11-12 (Sun, 12 Nov 2017) Changed paths: M client/galaxy/scripts/utils/ajax-queue.js M static/maps/utils/ajax-queue.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/utils/ajax-queue.js Log Message: ----------- Merge pull request #4985 from dannon/fix-named-ajax-queue Fix initialization of named ajax queue Compare: https://github.com/galaxyproject/galaxy/compare/7857b152cd10...c7ef71dfc9df

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[galaxyproject/usegalaxy-playbook] 31fa1e: Upgrade du novo to 2.0.9
by GitHub 10 Nov '17

10 Nov '17

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 31fa1e38d70bb7f77c64a2b2c6bb841189ac7ea1 https://github.com/galaxyproject/usegalaxy-playbook/commit/31fa1e38d70bb7f7… Author: Dave B <dave(a)bx.psu.edu> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M env/main/files/galaxy/var/integrated_tool_panel.xml M env/main/files/galaxy/var/shed_tool_conf.xml Log Message: ----------- Upgrade du novo to 2.0.9

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[galaxyproject/galaxy] 875fb3: Add @flakey test annotation and "skip" them if the...
by GitHub 10 Nov '17

10 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 875fb3641fbc70bc406be2744174e4945f61b99d https://github.com/galaxyproject/galaxy/commit/875fb3641fbc70bc406be2744174… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M .ci/jenkins/selenium/run_tests.sh M run_tests.sh M test/base/populators.py M test/selenium_tests/test_jupyter.py Log Message: ----------- Add @flakey test annotation and "skip" them if the fail on Jenkins. Use it to skip the Juypter test that keeps randomly failing builds if there are problems. Commit: 7857b152cd10d9490ac2433ff2905ca1a47ee32c https://github.com/galaxyproject/galaxy/commit/7857b152cd10d9490ac2433ff290… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M .ci/jenkins/selenium/run_tests.sh M run_tests.sh M test/base/populators.py M test/selenium_tests/test_jupyter.py Log Message: ----------- Merge pull request #4972 from jmchilton/flakey Add @flakey test annotation and "skip" them if the fail on Jenkins. Compare: https://github.com/galaxyproject/galaxy/compare/438177d6ed77...7857b152cd10

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[galaxyproject/galaxy] 2f63d8: Capture a bunch of labelled screenshots of Galaxy ...
by GitHub 10 Nov '17

10 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 2f63d8bd70241e0db725e60734762a785a84da56 https://github.com/galaxyproject/galaxy/commit/2f63d8bd70241e0db725e6073476… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M .ci/jenkins/selenium/run_tests.sh M test/selenium_tests/framework.py M test/selenium_tests/test_collection_builders.py M test/selenium_tests/test_history_dataset_state.py M test/selenium_tests/test_history_sharing.py M test/selenium_tests/test_library_contents.py M test/selenium_tests/test_library_landing.py M test/selenium_tests/test_published_histories_grid.py M test/selenium_tests/test_saved_histories.py M test/selenium_tests/test_tool_form.py M test/selenium_tests/test_workflow_editor.py M test/selenium_tests/test_workflow_management.py M test/selenium_tests/test_workflow_run.py Log Message: ----------- Capture a bunch of labelled screenshots of Galaxy durings tests. During pull requests reviews this allows easy visual inspection of various components to augment the automated testing. Commit: 438177d6ed7754ecd7c82a67a56bc851c6b48165 https://github.com/galaxyproject/galaxy/commit/438177d6ed7754ecd7c82a67a56b… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M .ci/jenkins/selenium/run_tests.sh M test/selenium_tests/framework.py M test/selenium_tests/test_collection_builders.py M test/selenium_tests/test_history_dataset_state.py M test/selenium_tests/test_history_sharing.py M test/selenium_tests/test_library_contents.py M test/selenium_tests/test_library_landing.py M test/selenium_tests/test_published_histories_grid.py M test/selenium_tests/test_saved_histories.py M test/selenium_tests/test_tool_form.py M test/selenium_tests/test_workflow_editor.py M test/selenium_tests/test_workflow_management.py M test/selenium_tests/test_workflow_run.py Log Message: ----------- Merge pull request #4971 from jmchilton/selenium_screenshot_suite Capture labelled screenshots of Galaxy during PR CI testing. Compare: https://github.com/galaxyproject/galaxy/compare/84c40e94d0b1...438177d6ed77

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[galaxyproject/galaxy] 50de50: Add CRAM to BAM converter
by GitHub 10 Nov '17

10 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 50de5081d6f284c61bd36ae11e467af1b829c9eb https://github.com/galaxyproject/galaxy/commit/50de5081d6f284c61bd36ae11e46… Author: mvdbeek <m.vandenbeek(a)gmail.com> Date: 2017-11-06 (Mon, 06 Nov 2017) Changed paths: M config/datatypes_conf.xml.sample A lib/galaxy/datatypes/converters/cram_to_bam.py A lib/galaxy/datatypes/converters/cram_to_bam_converter.xml Log Message: ----------- Add CRAM to BAM converter Commit: 84c40e94d0b19747bd2ac0bb151437456ca5ab8f https://github.com/galaxyproject/galaxy/commit/84c40e94d0b19747bd2ac0bb1514… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M config/datatypes_conf.xml.sample A lib/galaxy/datatypes/converters/cram_to_bam.py A lib/galaxy/datatypes/converters/cram_to_bam_converter.xml Log Message: ----------- Merge pull request #4939 from mvdbeek/cram_to_bam Add CRAM to BAM converter Compare: https://github.com/galaxyproject/galaxy/compare/0982dc0f0439...84c40e94d0b1

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[galaxyproject/galaxy] 5df61d: fi xlink to deps
by GitHub 09 Nov '17

09 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 5df61d91f3ead709692f36d2dc2ba5f635b6e548 https://github.com/galaxyproject/galaxy/commit/5df61d91f3ead709692f36d2dc2b… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M README.rst Log Message: ----------- fi xlink to deps Commit: b0c7d8da23a6fbf7cef58ba9a0ae5a8c5c9731a2 https://github.com/galaxyproject/galaxy/commit/b0c7d8da23a6fbf7cef58ba9a0ae… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M README.rst Log Message: ----------- bring readme on par with features Commit: c1421fda32e7c74905a3920681b2abf397f759c1 https://github.com/galaxyproject/galaxy/commit/c1421fda32e7c74905a3920681b2… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M README.rst Log Message: ----------- add dot Commit: 0982dc0f043999aa0e12446a475edd4974828347 https://github.com/galaxyproject/galaxy/commit/0982dc0f043999aa0e12446a475e… Author: Nicola Soranzo <nsoranzo(a)tiscali.it> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M README.rst Log Message: ----------- Merge pull request #4968 from martenson/readme readme - bring on par with manage dependencies feature Compare: https://github.com/galaxyproject/galaxy/compare/0a3b5255434a...0982dc0f0439

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[galaxyproject/galaxy] 92519e: Fix up admin panel's run_stats.
by GitHub 09 Nov '17

09 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 92519e5a56ace738b63332c055db8f1dc1cbcf3c https://github.com/galaxyproject/galaxy/commit/92519e5a56ace738b63332c055db… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/reports_webapp/run_stats.js M static/maps/reports_webapp/run_stats.js.map M static/scripts/reports_webapp/run_stats.js M templates/webapps/reports/run_stats.mako Log Message: ----------- Fix up admin panel's run_stats. Commit: dd1f69ad5cf4e424b40af14a670ec171a28e7681 https://github.com/galaxyproject/galaxy/commit/dd1f69ad5cf4e424b40af14a670e… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/reports_webapp/run_stats.js M static/maps/reports_webapp/run_stats.js.map M static/scripts/reports_webapp/run_stats.js M templates/webapps/reports/run_stats.mako Log Message: ----------- D3 imports (note the currentEvent hack needed; babel known issue with binding) Commit: 03a033e3c732a7b23c3a987643d0778ac1c3606e https://github.com/galaxyproject/galaxy/commit/03a033e3c732a7b23c3a987643d0… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/reports_webapp/run_stats.js M static/maps/reports_webapp/run_stats.js.map M static/scripts/reports_webapp/run_stats.js Log Message: ----------- More cleanup for reports/run_stats Commit: eac8573a3caf327b6d766e1f14dfff76afba1bab https://github.com/galaxyproject/galaxy/commit/eac8573a3caf327b6d766e1f14df… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/reports_webapp/run_stats.js M static/maps/reports_webapp/run_stats.js.map M static/scripts/reports_webapp/run_stats.js Log Message: ----------- Swap from event.path to event.target.parentElement for compatibility Commit: 0a3b5255434a48fcdb845c4f6bb9350d6a70bcd5 https://github.com/galaxyproject/galaxy/commit/0a3b5255434a48fcdb845c4f6bb9… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/reports_webapp/run_stats.js M static/maps/reports_webapp/run_stats.js.map M static/scripts/reports_webapp/run_stats.js M templates/webapps/reports/run_stats.mako Log Message: ----------- Merge pull request #4967 from dannon/fix-admin-panel Fix up reports javascript Compare: https://github.com/galaxyproject/galaxy/compare/76d4afe3a600...0a3b5255434a

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[galaxyproject/infrastructure-playbook] ffeeed: Add missing people from common sshkeys
by GitHub 09 Nov '17

09 Nov '17

Branch: refs/heads/galaxyenv Home: https://github.com/galaxyproject/infrastructure-playbook Commit: ffeeed5b2e00db66f8b84a9b6034fbd237870498 https://github.com/galaxyproject/infrastructure-playbook/commit/ffeeed5b2e0… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M env/common/group_vars/sshservers/vault.yml Log Message: ----------- Add missing people from common sshkeys Commit: 93480aed148c9dd839adeaaf7b7fd9c9d8aa820d https://github.com/galaxyproject/infrastructure-playbook/commit/93480aed148… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M env/galaxy/group_vars/starforgebuilders.yml Log Message: ----------- Stop using removed local_users syntax and note an annoyance with the new inheritance merging. Compare: https://github.com/galaxyproject/infrastructure-playbook/compare/c6fd1ff76b…

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[galaxyproject/galaxy] 4d2a3c: Test both endpoints for collection creation in his...
by GitHub 09 Nov '17

09 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 4d2a3c6074252a8268141ccfe6575405658fc3cc https://github.com/galaxyproject/galaxy/commit/4d2a3c6074252a8268141ccfe657… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M lib/galaxy/webapps/galaxy/api/history_contents.py M test/api/test_history_contents.py Log Message: ----------- Test both endpoints for collection creation in history contents API. Commit: 76d4afe3a6009e23de6e54d16c23d0579f9b0ad1 https://github.com/galaxyproject/galaxy/commit/76d4afe3a6009e23de6e54d16c23… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M lib/galaxy/webapps/galaxy/api/history_contents.py M test/api/test_history_contents.py Log Message: ----------- Merge pull request #4965 from jmchilton/hdca_creation_api_clarification Test both endpoints for collection creation in history contents API. Compare: https://github.com/galaxyproject/galaxy/compare/8ce7d294901f...76d4afe3a600

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[galaxyproject/galaxy] 372d65: Upgrade prettier, fixes comment formatting and han...
by GitHub 09 Nov '17

09 Nov '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 372d65d23936c84b7f28fc03465611a2ca12cf58 https://github.com/galaxyproject/galaxy/commit/372d65d23936c84b7f28fc034656… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2017-11-08 (Wed, 08 Nov 2017) Changed paths: M client/galaxy/scripts/admin.toolshed.js M client/galaxy/scripts/galaxy.interactive_environments.js M client/galaxy/scripts/galaxy.library.js M client/galaxy/scripts/galaxy.pages.js M client/galaxy/scripts/i18n.js M client/galaxy/scripts/layout/modal.js M client/galaxy/scripts/mvc/annotation.js M client/galaxy/scripts/mvc/collection/collection-li-edit.js M client/galaxy/scripts/mvc/collection/collection-li.js M client/galaxy/scripts/mvc/collection/collection-model.js M client/galaxy/scripts/mvc/collection/collection-view-edit.js M client/galaxy/scripts/mvc/collection/collection-view.js M client/galaxy/scripts/mvc/collection/list-collection-creator.js M client/galaxy/scripts/mvc/collection/list-of-pairs-collection-creator.js M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js M client/galaxy/scripts/mvc/dataset/dataset-li.js M client/galaxy/scripts/mvc/dataset/dataset-list.js M client/galaxy/scripts/mvc/dataset/dataset-model.js M client/galaxy/scripts/mvc/form/form-data.js M client/galaxy/scripts/mvc/form/form-input.js M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/grid/grid-shared.js M client/galaxy/scripts/mvc/grid/grid-template.js M client/galaxy/scripts/mvc/history/hda-li-edit.js M client/galaxy/scripts/mvc/history/history-model.js M client/galaxy/scripts/mvc/history/history-view-edit-current.js M client/galaxy/scripts/mvc/history/history-view-edit.js M client/galaxy/scripts/mvc/history/history-view.js M client/galaxy/scripts/mvc/job/job-model.js M client/galaxy/scripts/mvc/library/library-dataset-view.js M client/galaxy/scripts/mvc/library/library-folder-view.js M client/galaxy/scripts/mvc/library/library-folderrow-view.js M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M client/galaxy/scripts/mvc/library/library-library-view.js M client/galaxy/scripts/mvc/library/library-libraryrow-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M client/galaxy/scripts/mvc/library/library-model.js M client/galaxy/scripts/mvc/library/library-util.js M client/galaxy/scripts/mvc/list/list-view.js M client/galaxy/scripts/mvc/tag.js M client/galaxy/scripts/mvc/tool/tool-form-composite.js M client/galaxy/scripts/mvc/tool/tool-form.js M client/galaxy/scripts/mvc/toolshed/util.js M client/galaxy/scripts/mvc/toolshed/workflows-view.js M client/galaxy/scripts/mvc/ui/ui-list.js M client/galaxy/scripts/mvc/ui/ui-modal.js M client/galaxy/scripts/mvc/ui/ui-popover.js M client/galaxy/scripts/mvc/ui/ui-select.js M client/galaxy/scripts/mvc/ui/ui-table.js M client/galaxy/scripts/mvc/ui/ui-thumbnails.js M client/galaxy/scripts/mvc/upload/collection/collection-row.js M client/galaxy/scripts/mvc/upload/collection/collection-view.js M client/galaxy/scripts/mvc/upload/default/default-row.js M client/galaxy/scripts/mvc/upload/default/default-view.js M client/galaxy/scripts/mvc/upload/upload-ftp.js M client/galaxy/scripts/mvc/upload/upload-view.js M client/galaxy/scripts/mvc/user/user-model.js M client/galaxy/scripts/mvc/user/user-preferences.js M client/galaxy/scripts/mvc/user/user-quotameter.js M client/galaxy/scripts/mvc/visualization/visualization-model.js M client/galaxy/scripts/mvc/workflow/workflow-manager.js M client/galaxy/scripts/mvc/workflow/workflow-view.js M client/galaxy/scripts/mvc/workflow/workflow.js M client/galaxy/scripts/nls/ja/locale.js M client/galaxy/scripts/ui/autocom_tagging.js M client/galaxy/scripts/ui/fa-icon-button.js M client/galaxy/scripts/ui/filter-control.js M client/galaxy/scripts/ui/mode-button.js M client/galaxy/scripts/ui/pagination.js M client/galaxy/scripts/ui/peek-column-selector.js M client/galaxy/scripts/ui/search-input.js M client/galaxy/scripts/utils/config.js M client/galaxy/scripts/utils/deferred.js M client/galaxy/scripts/utils/localization.js M client/galaxy/scripts/utils/utils.js M client/galaxy/scripts/viz/bbi-data-manager.js M client/galaxy/scripts/viz/phyloviz.js M client/galaxy/scripts/viz/sweepster.js M client/galaxy/scripts/viz/trackster.js M client/galaxy/scripts/viz/trackster/filters.js M client/galaxy/scripts/viz/visualization.js M client/yarn.lock M static/maps/admin.toolshed.js.map M static/maps/galaxy.interactive_environments.js.map M static/maps/galaxy.library.js.map M static/maps/galaxy.pages.js.map M static/maps/i18n.js.map M static/maps/layout/modal.js.map M static/maps/mvc/annotation.js.map M static/maps/mvc/collection/collection-li-edit.js.map M static/maps/mvc/collection/collection-li.js.map M static/maps/mvc/collection/collection-model.js.map M static/maps/mvc/collection/collection-view-edit.js.map M static/maps/mvc/collection/collection-view.js.map M static/maps/mvc/collection/list-collection-creator.js.map M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map M static/maps/mvc/dataset/dataset-li-edit.js.map M static/maps/mvc/dataset/dataset-li.js.map M static/maps/mvc/dataset/dataset-list.js.map M static/maps/mvc/dataset/dataset-model.js.map M static/maps/mvc/form/form-data.js.map M static/maps/mvc/form/form-input.js.map M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/grid/grid-shared.js.map M static/maps/mvc/grid/grid-template.js.map M static/maps/mvc/history/hda-li-edit.js.map M static/maps/mvc/history/history-model.js.map M static/maps/mvc/history/history-view-edit-current.js.map M static/maps/mvc/history/history-view-edit.js.map M static/maps/mvc/history/history-view.js.map M static/maps/mvc/job/job-model.js.map M static/maps/mvc/library/library-dataset-view.js.map M static/maps/mvc/library/library-folder-view.js.map M static/maps/mvc/library/library-folderrow-view.js.map M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/maps/mvc/library/library-library-view.js.map M static/maps/mvc/library/library-libraryrow-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/maps/mvc/library/library-model.js.map M static/maps/mvc/library/library-util.js.map M static/maps/mvc/list/list-view.js.map M static/maps/mvc/tag.js.map M static/maps/mvc/tool/tool-form-composite.js.map M static/maps/mvc/tool/tool-form.js.map M static/maps/mvc/toolshed/util.js.map M static/maps/mvc/toolshed/workflows-view.js.map M static/maps/mvc/ui/ui-list.js.map M static/maps/mvc/ui/ui-modal.js.map M static/maps/mvc/ui/ui-popover.js.map M static/maps/mvc/ui/ui-select.js.map M static/maps/mvc/ui/ui-table.js.map M static/maps/mvc/ui/ui-thumbnails.js.map M static/maps/mvc/upload/collection/collection-row.js.map M static/maps/mvc/upload/collection/collection-view.js.map M static/maps/mvc/upload/default/default-row.js.map M static/maps/mvc/upload/default/default-view.js.map M static/maps/mvc/upload/upload-ftp.js.map M static/maps/mvc/upload/upload-view.js.map M static/maps/mvc/user/user-model.js.map M static/maps/mvc/user/user-preferences.js.map M static/maps/mvc/user/user-quotameter.js.map M static/maps/mvc/visualization/visualization-model.js.map M static/maps/mvc/workflow/workflow-manager.js.map M static/maps/mvc/workflow/workflow-view.js.map M static/maps/mvc/workflow/workflow.js.map M static/maps/nls/ja/locale.js.map M static/maps/ui/autocom_tagging.js.map M static/maps/ui/fa-icon-button.js.map M static/maps/ui/filter-control.js.map M static/maps/ui/mode-button.js.map M static/maps/ui/pagination.js.map M static/maps/ui/peek-column-selector.js.map M static/maps/ui/search-input.js.map M static/maps/utils/config.js.map M static/maps/utils/deferred.js.map M static/maps/utils/localization.js.map M static/maps/utils/utils.js.map M static/maps/viz/bbi-data-manager.js.map M static/maps/viz/phyloviz.js.map M static/maps/viz/sweepster.js.map M static/maps/viz/trackster.js.map M static/maps/viz/trackster/filters.js.map M static/maps/viz/visualization.js.map M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map Log Message: ----------- Upgrade prettier, fixes comment formatting and handles string literals a little better. Commit: 8ce7d294901f8f8b22f0bf180e25b10e35195d39 https://github.com/galaxyproject/galaxy/commit/8ce7d294901f8f8b22f0bf180e25… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-11-09 (Thu, 09 Nov 2017) Changed paths: M client/galaxy/scripts/admin.toolshed.js M client/galaxy/scripts/galaxy.interactive_environments.js M client/galaxy/scripts/galaxy.library.js M client/galaxy/scripts/galaxy.pages.js M client/galaxy/scripts/i18n.js M client/galaxy/scripts/layout/modal.js M client/galaxy/scripts/mvc/annotation.js M client/galaxy/scripts/mvc/collection/collection-li-edit.js M client/galaxy/scripts/mvc/collection/collection-li.js M client/galaxy/scripts/mvc/collection/collection-model.js M client/galaxy/scripts/mvc/collection/collection-view-edit.js M client/galaxy/scripts/mvc/collection/collection-view.js M client/galaxy/scripts/mvc/collection/list-collection-creator.js M client/galaxy/scripts/mvc/collection/list-of-pairs-collection-creator.js M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js M client/galaxy/scripts/mvc/dataset/dataset-li.js M client/galaxy/scripts/mvc/dataset/dataset-list.js M client/galaxy/scripts/mvc/dataset/dataset-model.js M client/galaxy/scripts/mvc/form/form-data.js M client/galaxy/scripts/mvc/form/form-input.js M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/grid/grid-shared.js M client/galaxy/scripts/mvc/grid/grid-template.js M client/galaxy/scripts/mvc/history/hda-li-edit.js M client/galaxy/scripts/mvc/history/history-model.js M client/galaxy/scripts/mvc/history/history-view-edit-current.js M client/galaxy/scripts/mvc/history/history-view-edit.js M client/galaxy/scripts/mvc/history/history-view.js M client/galaxy/scripts/mvc/job/job-model.js M client/galaxy/scripts/mvc/library/library-dataset-view.js M client/galaxy/scripts/mvc/library/library-folder-view.js M client/galaxy/scripts/mvc/library/library-folderrow-view.js M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M client/galaxy/scripts/mvc/library/library-library-view.js M client/galaxy/scripts/mvc/library/library-libraryrow-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M client/galaxy/scripts/mvc/library/library-model.js M client/galaxy/scripts/mvc/library/library-util.js M client/galaxy/scripts/mvc/list/list-view.js M client/galaxy/scripts/mvc/tag.js M client/galaxy/scripts/mvc/tool/tool-form-composite.js M client/galaxy/scripts/mvc/tool/tool-form.js M client/galaxy/scripts/mvc/toolshed/util.js M client/galaxy/scripts/mvc/toolshed/workflows-view.js M client/galaxy/scripts/mvc/ui/ui-list.js M client/galaxy/scripts/mvc/ui/ui-modal.js M client/galaxy/scripts/mvc/ui/ui-popover.js M client/galaxy/scripts/mvc/ui/ui-select.js M client/galaxy/scripts/mvc/ui/ui-table.js M client/galaxy/scripts/mvc/ui/ui-thumbnails.js M client/galaxy/scripts/mvc/upload/collection/collection-row.js M client/galaxy/scripts/mvc/upload/collection/collection-view.js M client/galaxy/scripts/mvc/upload/default/default-row.js M client/galaxy/scripts/mvc/upload/default/default-view.js M client/galaxy/scripts/mvc/upload/upload-ftp.js M client/galaxy/scripts/mvc/upload/upload-view.js M client/galaxy/scripts/mvc/user/user-model.js M client/galaxy/scripts/mvc/user/user-preferences.js M client/galaxy/scripts/mvc/user/user-quotameter.js M client/galaxy/scripts/mvc/visualization/visualization-model.js M client/galaxy/scripts/mvc/workflow/workflow-manager.js M client/galaxy/scripts/mvc/workflow/workflow-view.js M client/galaxy/scripts/mvc/workflow/workflow.js M client/galaxy/scripts/nls/ja/locale.js M client/galaxy/scripts/ui/autocom_tagging.js M client/galaxy/scripts/ui/fa-icon-button.js M client/galaxy/scripts/ui/filter-control.js M client/galaxy/scripts/ui/mode-button.js M client/galaxy/scripts/ui/pagination.js M client/galaxy/scripts/ui/peek-column-selector.js M client/galaxy/scripts/ui/search-input.js M client/galaxy/scripts/utils/config.js M client/galaxy/scripts/utils/deferred.js M client/galaxy/scripts/utils/localization.js M client/galaxy/scripts/utils/utils.js M client/galaxy/scripts/viz/bbi-data-manager.js M client/galaxy/scripts/viz/phyloviz.js M client/galaxy/scripts/viz/sweepster.js M client/galaxy/scripts/viz/trackster.js M client/galaxy/scripts/viz/trackster/filters.js M client/galaxy/scripts/viz/visualization.js M client/yarn.lock M static/maps/admin.toolshed.js.map M static/maps/galaxy.interactive_environments.js.map M static/maps/galaxy.library.js.map M static/maps/galaxy.pages.js.map M static/maps/i18n.js.map M static/maps/layout/modal.js.map M static/maps/mvc/annotation.js.map M static/maps/mvc/collection/collection-li-edit.js.map M static/maps/mvc/collection/collection-li.js.map M static/maps/mvc/collection/collection-model.js.map M static/maps/mvc/collection/collection-view-edit.js.map M static/maps/mvc/collection/collection-view.js.map M static/maps/mvc/collection/list-collection-creator.js.map M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map M static/maps/mvc/dataset/dataset-li-edit.js.map M static/maps/mvc/dataset/dataset-li.js.map M static/maps/mvc/dataset/dataset-list.js.map M static/maps/mvc/dataset/dataset-model.js.map M static/maps/mvc/form/form-data.js.map M static/maps/mvc/form/form-input.js.map M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/grid/grid-shared.js.map M static/maps/mvc/grid/grid-template.js.map M static/maps/mvc/history/hda-li-edit.js.map M static/maps/mvc/history/history-model.js.map M static/maps/mvc/history/history-view-edit-current.js.map M static/maps/mvc/history/history-view-edit.js.map M static/maps/mvc/history/history-view.js.map M static/maps/mvc/job/job-model.js.map M static/maps/mvc/library/library-dataset-view.js.map M static/maps/mvc/library/library-folder-view.js.map M static/maps/mvc/library/library-folderrow-view.js.map M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/maps/mvc/library/library-library-view.js.map M static/maps/mvc/library/library-libraryrow-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/maps/mvc/library/library-model.js.map M static/maps/mvc/library/library-util.js.map M static/maps/mvc/list/list-view.js.map M static/maps/mvc/tag.js.map M static/maps/mvc/tool/tool-form-composite.js.map M static/maps/mvc/tool/tool-form.js.map M static/maps/mvc/toolshed/util.js.map M static/maps/mvc/toolshed/workflows-view.js.map M static/maps/mvc/ui/ui-list.js.map M static/maps/mvc/ui/ui-modal.js.map M static/maps/mvc/ui/ui-popover.js.map M static/maps/mvc/ui/ui-select.js.map M static/maps/mvc/ui/ui-table.js.map M static/maps/mvc/ui/ui-thumbnails.js.map M static/maps/mvc/upload/collection/collection-row.js.map M static/maps/mvc/upload/collection/collection-view.js.map M static/maps/mvc/upload/default/default-row.js.map M static/maps/mvc/upload/default/default-view.js.map M static/maps/mvc/upload/upload-ftp.js.map M static/maps/mvc/upload/upload-view.js.map M static/maps/mvc/user/user-model.js.map M static/maps/mvc/user/user-preferences.js.map M static/maps/mvc/user/user-quotameter.js.map M static/maps/mvc/visualization/visualization-model.js.map M static/maps/mvc/workflow/workflow-manager.js.map M static/maps/mvc/workflow/workflow-view.js.map M static/maps/mvc/workflow/workflow.js.map M static/maps/nls/ja/locale.js.map M static/maps/ui/autocom_tagging.js.map M static/maps/ui/fa-icon-button.js.map M static/maps/ui/filter-control.js.map M static/maps/ui/mode-button.js.map M static/maps/ui/pagination.js.map M static/maps/ui/peek-column-selector.js.map M static/maps/ui/search-input.js.map M static/maps/utils/config.js.map M static/maps/utils/deferred.js.map M static/maps/utils/localization.js.map M static/maps/utils/utils.js.map M static/maps/viz/bbi-data-manager.js.map M static/maps/viz/phyloviz.js.map M static/maps/viz/sweepster.js.map M static/maps/viz/trackster.js.map M static/maps/viz/trackster/filters.js.map M static/maps/viz/visualization.js.map M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map Log Message: ----------- Merge pull request #4964 from dannon/prettier_upgrade_18 Prettier upgrade Compare: https://github.com/galaxyproject/galaxy/compare/963cfd1a3faa...8ce7d294901f

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