- galaxy-commits - lists.galaxyproject.org

[galaxyproject/galaxy] 0f984d: Unicodify pretty datetimes which can contain non-A...
by GitHub 09 May '16

09 May '16

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: 0f984d3bfda9efaa6869286b13ff6842a6df67fb https://github.com/galaxyproject/galaxy/commit/0f984d3bfda9efaa6869286b13ff… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M templates/show_params.mako M templates/webapps/galaxy/data_manager/view_job.mako Log Message: ----------- Unicodify pretty datetimes which can contain non-ASCII chars Commit: 79dd8c82f034de51531fb843796249e2b21d9d62 https://github.com/galaxyproject/galaxy/commit/79dd8c82f034de51531fb8437962… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-07 (Sat, 07 May 2016) Changed paths: M templates/show_params.mako M templates/webapps/galaxy/data_manager/view_job.mako Log Message: ----------- Merge pull request #2312 from nsoranzo/release_16.01_fix_makos [16.01] Unicodify pretty datetimes which can contain non-ASCII chars Commit: 5710506229e16a64a6fe35279fb49df5c73bc0ce https://github.com/galaxyproject/galaxy/commit/5710506229e16a64a6fe35279fb4… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-09 (Mon, 09 May 2016) Changed paths: M templates/show_params.mako M templates/webapps/galaxy/data_manager/view_job.mako Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Conflicts: templates/show_params.mako Compare: https://github.com/galaxyproject/galaxy/compare/5bb7c1d44815...5710506229e1

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[galaxyproject/galaxy] 0f984d: Unicodify pretty datetimes which can contain non-A...
by GitHub 08 May '16

08 May '16

Branch: refs/heads/release_16.01 Home: https://github.com/galaxyproject/galaxy Commit: 0f984d3bfda9efaa6869286b13ff6842a6df67fb https://github.com/galaxyproject/galaxy/commit/0f984d3bfda9efaa6869286b13ff… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M templates/show_params.mako M templates/webapps/galaxy/data_manager/view_job.mako Log Message: ----------- Unicodify pretty datetimes which can contain non-ASCII chars Commit: 79dd8c82f034de51531fb843796249e2b21d9d62 https://github.com/galaxyproject/galaxy/commit/79dd8c82f034de51531fb8437962… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-07 (Sat, 07 May 2016) Changed paths: M templates/show_params.mako M templates/webapps/galaxy/data_manager/view_job.mako Log Message: ----------- Merge pull request #2312 from nsoranzo/release_16.01_fix_makos [16.01] Unicodify pretty datetimes which can contain non-ASCII chars Compare: https://github.com/galaxyproject/galaxy/compare/41e6f22f338a...79dd8c82f034

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[galaxyproject/galaxy] 427804: Do not sniff one-line files as CSV/TSV
by GitHub 07 May '16

07 May '16

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: 427804ff823e4b4277e768e1822bd1642c549a1f https://github.com/galaxyproject/galaxy/commit/427804ff823e4b4277e768e1822b… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/datatypes/sniff.py M lib/galaxy/datatypes/tabular.py Log Message: ----------- Do not sniff one-line files as CSV/TSV Commit: 5bb7c1d448156c1d20f52eaac3fcab4b1a79e0e5 https://github.com/galaxyproject/galaxy/commit/5bb7c1d448156c1d20f52eaac3fc… Author: Björn Grüning <bjoern(a)gruenings.eu> Date: 2016-05-07 (Sat, 07 May 2016) Changed paths: M lib/galaxy/datatypes/sniff.py M lib/galaxy/datatypes/tabular.py Log Message: ----------- Merge pull request #2317 from nsoranzo/release_16.04_tsv_fix [16.04] Do not sniff one-line files as CSV/TSV Compare: https://github.com/galaxyproject/galaxy/compare/ff903ac684d7...5bb7c1d44815

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[galaxyproject/galaxy] bd2245: Revise selectors, add test cases
by GitHub 06 May '16

06 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: bd22456c417427c3e39e2dcb9a81ecaf7f173d82 https://github.com/galaxyproject/galaxy/commit/bd22456c417427c3e39e2dcb9a81… Author: guerler <aysam.guerler(a)gmail.com> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/form/form-section.js M client/galaxy/scripts/mvc/ui/ui-options.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/form/form-section.js.map M static/maps/mvc/ui/ui-options.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/form/form-section.js M static/scripts/mvc/ui/ui-options.js M static/scripts/mvc/ui/ui-select-default.js M test/qunit/tests/ui_tests.js Log Message: ----------- Revise selectors, add test cases Commit: cfb0ddb2ddd170875d2ea19cea941a266894095c https://github.com/galaxyproject/galaxy/commit/cfb0ddb2ddd170875d2ea19cea94… Author: guerler <aysam.guerler(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/ui/ui-drilldown.js M client/galaxy/scripts/mvc/ui/ui-options.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M client/galaxy/style/less/ui.less M config/plugins/visualizations/charts/static/views/group.js M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/ui/ui-drilldown.js.map M static/maps/mvc/ui/ui-options.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/ui/ui-drilldown.js M static/scripts/mvc/ui/ui-options.js M static/scripts/mvc/ui/ui-select-default.js M static/style/blue/base.css M test/qunit/tests/ui_tests.html M test/qunit/tests/ui_tests.js Log Message: ----------- Revise options, add test cases Commit: 995509776ef002c6c7be30caabcfd3dfcab3811c https://github.com/galaxyproject/galaxy/commit/995509776ef002c6c7be30caabcf… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-06 (Fri, 06 May 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/form/form-section.js M client/galaxy/scripts/mvc/ui/ui-drilldown.js M client/galaxy/scripts/mvc/ui/ui-options.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M client/galaxy/style/less/ui.less M config/plugins/visualizations/charts/static/views/group.js M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/form/form-section.js.map M static/maps/mvc/ui/ui-drilldown.js.map M static/maps/mvc/ui/ui-options.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/form/form-section.js M static/scripts/mvc/ui/ui-drilldown.js M static/scripts/mvc/ui/ui-options.js M static/scripts/mvc/ui/ui-select-default.js M static/style/blue/base.css M test/qunit/tests/ui_tests.html M test/qunit/tests/ui_tests.js Log Message: ----------- Merge pull request #2305 from guerler/revise_select_000 Revise selection, options and drilldown wrappers, add tests Compare: https://github.com/galaxyproject/galaxy/compare/1809a22e9fe3...995509776ef0

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[galaxyproject/galaxy] 75735a: A pass adding new contributors from 15.10->16.04(i...
by GitHub 06 May '16

06 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 75735a498a183b86fa704fdff830b82cb33c2479 https://github.com/galaxyproject/galaxy/commit/75735a498a183b86fa704fdff830… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- A pass adding new contributors from 15.10->16.04(ish). Needs a few blanks filled in. Commit: 7a7e3b46d19033e082a38297464d2e205a292759 https://github.com/galaxyproject/galaxy/commit/7a7e3b46d19033e082a38297464d… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- Add Sourav's email, add Jay Commit: a2e8d5db6569b8f7f171b930c127b08c22162230 https://github.com/galaxyproject/galaxy/commit/a2e8d5db6569b8f7f171b930c127… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- Merge w/ dave's sortnig. Commit: 9bb80950e3951d0676ef9bf0d3f5d82667588dbe https://github.com/galaxyproject/galaxy/commit/9bb80950e3951d0676ef9bf0d3f5… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- Add Ryan's last name. Commit: e3c09ac1dece3a1dd8ff7b11c8e516545e543597 https://github.com/galaxyproject/galaxy/commit/e3c09ac1dece3a1dd8ff7b11c8e5… Author: Dave Bouvier <dave(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- Update spelling. Commit: 1809a22e9fe3a105f592a7c3fb38b4cda7e2c42f https://github.com/galaxyproject/galaxy/commit/1809a22e9fe3a105f592a7c3fb38… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M CONTRIBUTORS.md Log Message: ----------- Merge pull request #2257 from dannon/contrib_update_000 A pass adding new contributors from 15.10->16.04(ish). Compare: https://github.com/galaxyproject/galaxy/compare/d7465a47fbea...1809a22e9fe3

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[galaxyproject/galaxy] 3005bb: Remove SLURM memory limit warning from stderr if t...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 3005bba5e389c86fccabe129326a1f3a675c6911 https://github.com/galaxyproject/galaxy/commit/3005bba5e389c86fccabe129326a… Author: Lance Parsons <lparsons(a)genomics.princeton.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Remove SLURM memory limit warning from stderr if the job was successful Commit: d40c237102115c1a4e664b8463ef1949a3741387 https://github.com/galaxyproject/galaxy/commit/d40c237102115c1a4e664b8463ef… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- If a Slurm post-mortem determines that a job is in a non-terminal state, return the job to the monitor queue. Commit: 338d25403109244f0b228f9a0df23e02e1de7578 https://github.com/galaxyproject/galaxy/commit/338d25403109244f0b228f9a0df2… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Use partial messages to match SLURM memory warnings Commit: ad0647d677cb1979b9841cf0c56ba26d7ec5ca34 https://github.com/galaxyproject/galaxy/commit/ad0647d677cb1979b9841cf0c56b… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Change elif to if because drmaa_state can be changed inside the if Commit: ce8fa33d547855c2f9dee914936db73fe5d47705 https://github.com/galaxyproject/galaxy/commit/ce8fa33d547855c2f9dee914936d… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2311 from natefoo/drmaa-failed [16.04] If a Slurm post-mortem determines that a job is in a non-terminal state, return the job to the monitor queue Commit: 41e6f22f338a6323cb48a23454ca95e798385045 https://github.com/galaxyproject/galaxy/commit/41e6f22f338a6323cb48a23454ca… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2309 from nsoranzo/release_16.01_slurm_mem_limit [16.01] Remove SLURM memory limit warning from stderr if the job was successful Commit: ff903ac684d7c59a6bfbde108fe439096505877d https://github.com/galaxyproject/galaxy/commit/ff903ac684d7c59a6bfbde108fe4… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: d7465a47fbea34e69ad8fce46a8a6702cf52d97d https://github.com/galaxyproject/galaxy/commit/d7465a47fbea34e69ad8fce46a8a… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge branch 'release_16.04' into dev Compare: https://github.com/galaxyproject/galaxy/compare/432ec84f9206...d7465a47fbea

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[galaxyproject/galaxy] 3005bb: Remove SLURM memory limit warning from stderr if t...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: 3005bba5e389c86fccabe129326a1f3a675c6911 https://github.com/galaxyproject/galaxy/commit/3005bba5e389c86fccabe129326a… Author: Lance Parsons <lparsons(a)genomics.princeton.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Remove SLURM memory limit warning from stderr if the job was successful Commit: 338d25403109244f0b228f9a0df23e02e1de7578 https://github.com/galaxyproject/galaxy/commit/338d25403109244f0b228f9a0df2… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Use partial messages to match SLURM memory warnings Commit: ad0647d677cb1979b9841cf0c56ba26d7ec5ca34 https://github.com/galaxyproject/galaxy/commit/ad0647d677cb1979b9841cf0c56b… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Change elif to if because drmaa_state can be changed inside the if Commit: 41e6f22f338a6323cb48a23454ca95e798385045 https://github.com/galaxyproject/galaxy/commit/41e6f22f338a6323cb48a23454ca… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2309 from nsoranzo/release_16.01_slurm_mem_limit [16.01] Remove SLURM memory limit warning from stderr if the job was successful Commit: ff903ac684d7c59a6bfbde108fe439096505877d https://github.com/galaxyproject/galaxy/commit/ff903ac684d7c59a6bfbde108fe4… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Compare: https://github.com/galaxyproject/galaxy/compare/ce8fa33d5478...ff903ac684d7

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[galaxyproject/galaxy] 3005bb: Remove SLURM memory limit warning from stderr if t...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/release_16.01 Home: https://github.com/galaxyproject/galaxy Commit: 3005bba5e389c86fccabe129326a1f3a675c6911 https://github.com/galaxyproject/galaxy/commit/3005bba5e389c86fccabe129326a… Author: Lance Parsons <lparsons(a)genomics.princeton.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Remove SLURM memory limit warning from stderr if the job was successful Commit: 338d25403109244f0b228f9a0df23e02e1de7578 https://github.com/galaxyproject/galaxy/commit/338d25403109244f0b228f9a0df2… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Use partial messages to match SLURM memory warnings Commit: ad0647d677cb1979b9841cf0c56ba26d7ec5ca34 https://github.com/galaxyproject/galaxy/commit/ad0647d677cb1979b9841cf0c56b… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Change elif to if because drmaa_state can be changed inside the if Commit: 41e6f22f338a6323cb48a23454ca95e798385045 https://github.com/galaxyproject/galaxy/commit/41e6f22f338a6323cb48a23454ca… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2309 from nsoranzo/release_16.01_slurm_mem_limit [16.01] Remove SLURM memory limit warning from stderr if the job was successful Compare: https://github.com/galaxyproject/galaxy/compare/063b25f660b6...41e6f22f338a

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[galaxyproject/galaxy] d40c23: If a Slurm post-mortem determines that a job is in...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: d40c237102115c1a4e664b8463ef1949a3741387 https://github.com/galaxyproject/galaxy/commit/d40c237102115c1a4e664b8463ef… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- If a Slurm post-mortem determines that a job is in a non-terminal state, return the job to the monitor queue. Commit: ce8fa33d547855c2f9dee914936db73fe5d47705 https://github.com/galaxyproject/galaxy/commit/ce8fa33d547855c2f9dee914936d… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2311 from natefoo/drmaa-failed [16.04] If a Slurm post-mortem determines that a job is in a non-terminal state, return the job to the monitor queue Compare: https://github.com/galaxyproject/galaxy/compare/a54a61897084...ce8fa33d5478

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[galaxyproject/galaxy] eda978: Monkeypatch Whoosh to use mkdtemp rather than a fi...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: eda9789ba7af56510af09a1d2f15e2afd44b4b12 https://github.com/galaxyproject/galaxy/commit/eda9789ba7af56510af09a1d2f15… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/tools/search/__init__.py Log Message: ----------- Monkeypatch Whoosh to use mkdtemp rather than a fixed temporary directory. Commit: 432ec84f920686ca624031b5246d71bab7d7b9a0 https://github.com/galaxyproject/galaxy/commit/432ec84f920686ca624031b5246d… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-05 (Thu, 05 May 2016) Changed paths: M lib/galaxy/tools/search/__init__.py Log Message: ----------- Merge pull request #2310 from natefoo/monkeypatch-whoosh Monkeypatch Whoosh to use mkdtemp rather than a fixed temporary directory Compare: https://github.com/galaxyproject/galaxy/compare/7a7de38b4ac5...432ec84f9206

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[galaxyproject/galaxy] fa577f: For published workflow display, Provide a better e...
by GitHub 05 May '16

05 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: fa577f75fb77da73b56c2f2c5422aca8e0cc1ea0 https://github.com/galaxyproject/galaxy/commit/fa577f75fb77da73b56c2f2c5422… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/webapps/galaxy/controllers/workflow.py Log Message: ----------- For published workflow display, Provide a better error when the workflow or user cannot be found. Commit: 7a7de38b4ac5df2e2e5cf76ee37497aecc2cbf5e https://github.com/galaxyproject/galaxy/commit/7a7de38b4ac5df2e2e5cf76ee374… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/webapps/galaxy/controllers/workflow.py Log Message: ----------- Merge pull request #2302 from dannon/published_workflow_display_404 For published workflow display, Provide a better error when the workf… Compare: https://github.com/galaxyproject/galaxy/compare/2b4fd0f12a41...7a7de38b4ac5

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[galaxyproject/usegalaxy-playbook] a57361: Test was updated
by GitHub 05 May '16

05 May '16

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: a573617ae3353ccff54489bf3da07c41dcc48f46 https://github.com/galaxyproject/usegalaxy-playbook/commit/a573617ae3353ccf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M stage/group_vars/all.yml Log Message: ----------- Test was updated

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[galaxyproject/galaxy] f984b0: Bump sqlite3 version
by GitHub 05 May '16

05 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: f984b0d092ac7ff237295d154b66bbfc550b63ee https://github.com/galaxyproject/galaxy/commit/f984b0d092ac7ff237295d154b66… Author: matthdsm <matthias.desmet(a)ugent.be> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/web/proxy/js/package.json Log Message: ----------- Bump sqlite3 version Update sqlite to version 3.1.3 Commit: 2b4fd0f12a412c92ff02bfd56e63d464d6246896 https://github.com/galaxyproject/galaxy/commit/2b4fd0f12a412c92ff02bfd56e63… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/galaxy/web/proxy/js/package.json Log Message: ----------- Merge pull request #2307 from matthdsm/patch-5 Bump sqlite3 version Compare: https://github.com/galaxyproject/galaxy/compare/8d46c5cb2b6b...2b4fd0f12a41

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[galaxyproject/usegalaxy-playbook] bc5a8b: Enable collectl on Test maybe?
by GitHub 04 May '16

04 May '16

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: bc5a8b7298e390cc4cff32484dff71c56c6c7396 https://github.com/galaxyproject/usegalaxy-playbook/commit/bc5a8b7298e390cc… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M files/galaxy/test.galaxyproject.org/config/job_metrics_conf.xml Log Message: ----------- Enable collectl on Test maybe? Commit: 5eae7eba6f4fc84be90b20104d3f9e19d7a738be https://github.com/galaxyproject/usegalaxy-playbook/commit/5eae7eba6f4fc84b… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M production/group_vars/galaxyservers.yml Log Message: ----------- Update Main masthead message to mention Jetstream Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/f7f51aeaf9a3...…

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[galaxyproject/infrastructure-playbook] de4bcf: Update common roles
by GitHub 04 May '16

04 May '16

Branch: refs/heads/master Home: https://github.com/galaxyproject/infrastructure-playbook Commit: de4bcf5d617f394b86af4a16c298344b00d1a09e https://github.com/galaxyproject/infrastructure-playbook/commit/de4bcf5d617… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M common_roles Log Message: ----------- Update common roles

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[galaxyproject/galaxy] ad4c7b: Fix extra blank line for flake8
by GitHub 04 May '16

04 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: ad4c7bcb99689d3a73e289801ae6dfe83fc56b6a https://github.com/galaxyproject/galaxy/commit/ad4c7bcb99689d3a73e289801ae6… Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Fix extra blank line for flake8 Commit: 8d46c5cb2b6b8e6306153f061d6b793432996665 https://github.com/galaxyproject/galaxy/commit/8d46c5cb2b6b8e6306153f061d6b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-04 (Wed, 04 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Merge pull request #2308 from nsoranzo/dev Fix extra blank line for flake8 Compare: https://github.com/galaxyproject/galaxy/compare/d82b5f1ff3c7...8d46c5cb2b6b

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[galaxyproject/galaxy] 55ca1f: Always remove the working directory after creating...
by GitHub 04 May '16

04 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 55ca1f5e4e4aa4eff50a1996c76aacd9f80452d8 https://github.com/galaxyproject/galaxy/commit/55ca1f5e4e4aa4eff50a1996c76a… Author: Dave Bouvier <dave(a)bx.psu.edu> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Always remove the working directory after creating the capsule archive. Commit: 0def95f2c846c7115794965fae21d9c49c55e827 https://github.com/galaxyproject/galaxy/commit/0def95f2c846c7115794965fae21… Author: Dave Bouvier <dave(a)bx.psu.edu> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Use a context manager instead of putting the rmtree in the finally. Commit: a26a931edd066aa8760a8eaa6ad5d4ac2a5e323c https://github.com/galaxyproject/galaxy/commit/a26a931edd066aa8760a8eaa6ad5… Author: Dave Bouvier <dave(a)bx.psu.edu> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Specify the keyword for keyword argument. Commit: 5900c54dbaad159e2777dccf5262962414fb9e6f https://github.com/galaxyproject/galaxy/commit/5900c54dbaad159e2777dccf5262… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Shift context manager Commit: 975a8a4b3b257559b9656e80fcd2a59cbf851b99 https://github.com/galaxyproject/galaxy/commit/975a8a4b3b257559b9656e80fcd2… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Remove slightly disruptive space. Commit: a8a1dd278319ed61a8136d18ecfe14ed8319e347 https://github.com/galaxyproject/galaxy/commit/a8a1dd278319ed61a8136d18ecfe… Author: Dave B <dave(a)bx.psu.edu> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Merge pull request #4 from dannon/toolshed_capsules Shift context manager Commit: d82b5f1ff3c760ad3380cf1db194c2e020850f93 https://github.com/galaxyproject/galaxy/commit/d82b5f1ff3c760ad3380cf1db194… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Merge pull request #2294 from davebx/toolshed_capsules Always remove the working directory after creating the capsule archive. Compare: https://github.com/galaxyproject/galaxy/compare/4c00358a1b1d...d82b5f1ff3c7

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[galaxyproject/galaxy] eb15c1: Prepass on remote user header based on maildomain ...
by GitHub 04 May '16

04 May '16

Branch: refs/heads/master Home: https://github.com/galaxyproject/galaxy Commit: eb15c147504ca4e871afed5f0ff005552b54e85f https://github.com/galaxyproject/galaxy/commit/eb15c147504ca4e871afed5f0ff0… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-19 (Tue, 19 Apr 2016) Changed paths: M lib/galaxy/web/framework/middleware/remoteuser.py M lib/galaxy/web/framework/webapp.py M lib/galaxy/webapps/galaxy/buildapp.py Log Message: ----------- Prepass on remote user header based on maildomain and normalize config. This resolves an error reported on -dev with maildomain and user being set incorrectly. Commit: ef12ae303577b2cc1967a08b341962f0ef1ffc5a https://github.com/galaxyproject/galaxy/commit/ef12ae303577b2cc1967a08b3419… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-21 (Thu, 21 Apr 2016) Changed paths: M templates/webapps/galaxy/library/common/browse_library.mako Log Message: ----------- Test fix for christ-h's french language date abbreviations breaking the old library display Commit: 7e93d462392952d27d414ba87d2dd406c9a60be1 https://github.com/galaxyproject/galaxy/commit/7e93d462392952d27d414ba87d2d… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-21 (Thu, 21 Apr 2016) Changed paths: M templates/webapps/galaxy/library/common/ldda_info.mako Log Message: ----------- Another location where the non-ascii month was breaking display. Commit: 3907d83abe98a77dc6ecfb4abe818ea1bf31e9eb https://github.com/galaxyproject/galaxy/commit/3907d83abe98a77dc6ecfb4abe81… Author: Aysam Guerler <aysam.guerler(a)gmail.com> Date: 2016-04-21 (Thu, 21 Apr 2016) Changed paths: M templates/webapps/galaxy/library/common/browse_library.mako M templates/webapps/galaxy/library/common/ldda_info.mako Log Message: ----------- Merge pull request #2214 from dannon/old_library_fixes [16.01] Browse library date handling for non-ascii month abbreviations Commit: 912e6ea30ffc8c67033c7815d7adee0cc9db5f90 https://github.com/galaxyproject/galaxy/commit/912e6ea30ffc8c67033c7815d7ad… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-04-21 (Thu, 21 Apr 2016) Changed paths: M test/tool_shed/base/twilltestcase.py Log Message: ----------- port TS test fix so we can rely on jenkins Commit: 9e980862c8b763cf3dd0209be49f0d2d75a90614 https://github.com/galaxyproject/galaxy/commit/9e980862c8b763cf3dd0209be49f… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-04-21 (Thu, 21 Apr 2016) Changed paths: M test/tool_shed/base/twilltestcase.py Log Message: ----------- Merge pull request #2220 from martenson/port-tstestfix [16.01] port TS test fix so we can rely on jenkins Commit: 615b0b444edf6648e174ff950f212c77bb4ed3f5 https://github.com/galaxyproject/galaxy/commit/615b0b444edf6648e174ff950f21… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Fix running workflows in the background when tool bursting is enabled. Commit: cdea922890683f8db0cd9dae3b6eed5695cfd094 https://github.com/galaxyproject/galaxy/commit/cdea922890683f8db0cd9dae3b6e… Author: Nitesh Turaga <nitesh.turaga(a)gmail.com> Date: 2016-05-02 (Mon, 02 May 2016) Changed paths: M lib/galaxy/web/framework/middleware/remoteuser.py M lib/galaxy/web/framework/webapp.py M lib/galaxy/webapps/galaxy/buildapp.py Log Message: ----------- Merge pull request #2195 from dannon/remoteuser_work [16.01] Prepass on remote user header based on maildomain and normalize confi… Commit: 063b25f660b6d842c4193469e5c360034562b877 https://github.com/galaxyproject/galaxy/commit/063b25f660b6d842c4193469e5c3… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge pull request #2260 from jmchilton/fix_burst_background_workflows [16.01] Fix running workflows in the background when tool bursting is enabled. Commit: e77d3f009a8e2fb51e97f41b4c47e397c90cbcea https://github.com/galaxyproject/galaxy/commit/e77d3f009a8e2fb51e97f41b4c47… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/web/framework/middleware/remoteuser.py M lib/galaxy/web/framework/webapp.py M lib/galaxy/webapps/galaxy/buildapp.py M lib/galaxy/workflow/run.py M templates/webapps/galaxy/library/common/browse_library.mako M templates/webapps/galaxy/library/common/ldda_info.mako M test/tool_shed/base/twilltestcase.py Log Message: ----------- Merge branch 'release_16.01' Compare: https://github.com/galaxyproject/galaxy/compare/b79474083b08...e77d3f009a8e

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[galaxyproject/galaxy] 615b0b: Fix running workflows in the background when tool ...
by GitHub 04 May '16

04 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 615b0b444edf6648e174ff950f212c77bb4ed3f5 https://github.com/galaxyproject/galaxy/commit/615b0b444edf6648e174ff950f21… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Fix running workflows in the background when tool bursting is enabled. Commit: 063b25f660b6d842c4193469e5c360034562b877 https://github.com/galaxyproject/galaxy/commit/063b25f660b6d842c4193469e5c3… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge pull request #2260 from jmchilton/fix_burst_background_workflows [16.01] Fix running workflows in the background when tool bursting is enabled. Commit: a54a61897084aa8a74dc5b813e59aaae084157d1 https://github.com/galaxyproject/galaxy/commit/a54a61897084aa8a74dc5b813e59… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: 4c00358a1b1d74c71312aa38f58eaff2be3c1e72 https://github.com/galaxyproject/galaxy/commit/4c00358a1b1d74c71312aa38f58e… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge branch 'release_16.04' into dev Compare: https://github.com/galaxyproject/galaxy/compare/9fcd759e8dd2...4c00358a1b1d

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[galaxyproject/galaxy] 615b0b: Fix running workflows in the background when tool ...
by GitHub 04 May '16

04 May '16

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: 615b0b444edf6648e174ff950f212c77bb4ed3f5 https://github.com/galaxyproject/galaxy/commit/615b0b444edf6648e174ff950f21… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Fix running workflows in the background when tool bursting is enabled. Commit: 063b25f660b6d842c4193469e5c360034562b877 https://github.com/galaxyproject/galaxy/commit/063b25f660b6d842c4193469e5c3… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge pull request #2260 from jmchilton/fix_burst_background_workflows [16.01] Fix running workflows in the background when tool bursting is enabled. Commit: a54a61897084aa8a74dc5b813e59aaae084157d1 https://github.com/galaxyproject/galaxy/commit/a54a61897084aa8a74dc5b813e59… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Compare: https://github.com/galaxyproject/galaxy/compare/56bd4ada048a...a54a61897084

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[galaxyproject/galaxy] 615b0b: Fix running workflows in the background when tool ...
by GitHub 04 May '16

04 May '16

Branch: refs/heads/release_16.01 Home: https://github.com/galaxyproject/galaxy Commit: 615b0b444edf6648e174ff950f212c77bb4ed3f5 https://github.com/galaxyproject/galaxy/commit/615b0b444edf6648e174ff950f21… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-04-27 (Wed, 27 Apr 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Fix running workflows in the background when tool bursting is enabled. Commit: 063b25f660b6d842c4193469e5c360034562b877 https://github.com/galaxyproject/galaxy/commit/063b25f660b6d842c4193469e5c3… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/workflow/run.py Log Message: ----------- Merge pull request #2260 from jmchilton/fix_burst_background_workflows [16.01] Fix running workflows in the background when tool bursting is enabled. Compare: https://github.com/galaxyproject/galaxy/compare/cdea92289068...063b25f660b6

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[galaxyproject/galaxy] 14bd39: Truncate job name in DRMAA runner by default for P...
by GitHub 03 May '16

03 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 14bd39867c419ebf32f19f915b02dadd2697b57a https://github.com/galaxyproject/galaxy/commit/14bd39867c419ebf32f19f915b02… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-04-28 (Thu, 28 Apr 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Truncate job name in DRMAA runner by default for PBSPro. We don't really have a clean way to tell if the DRMAA runner is serving to PBSPro so we make this truncation the default for the DRMAA runner but in the case of the SLURM runner we continue to not truncate. - http://dev.list.galaxyproject.org/Problem-with-DRMAA-and-Pbs-Pro-td4669338.… - http://dev.list.galaxyproject.org/If-you-need-to-use-PBS-Pro-with-Galaxy-16… Commit: 56bd4ada048ad411ca388f18e0aa2e81162a8b40 https://github.com/galaxyproject/galaxy/commit/56bd4ada048ad411ca388f18e0aa… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge pull request #2265 from jmchilton/pbs_pro_name_fix [16.04] Truncate job name in DRMAA runner by default for PBSPro. Commit: 9fcd759e8dd244a67191d5661f71767995f67bd9 https://github.com/galaxyproject/galaxy/commit/9fcd759e8dd244a67191d5661f71… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/jobs/runners/drmaa.py M lib/galaxy/jobs/runners/slurm.py Log Message: ----------- Merge branch 'release_16.04' into dev Compare: https://github.com/galaxyproject/galaxy/compare/5063384a6cbc...9fcd759e8dd2

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[galaxyproject/galaxy] af7d7d: More fixes from downstream projects.
by GitHub 03 May '16

03 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: af7d7de596f89a3784c97d99e22a4386d0c46d41 https://github.com/galaxyproject/galaxy/commit/af7d7de596f89a3784c97d99e22a… Author: John Chilton <jmchilton(a)gmail.com> Date: 2016-05-02 (Mon, 02 May 2016) Changed paths: M lib/galaxy/tools/linters/general.py M test/api/workflows_format_2/converter.py M test/api/workflows_format_2/interface.py M test/api/workflows_format_2/main.py Log Message: ----------- More fixes from downstream projects. - Fixes a bug in lib/galaxy/tools/linters/general.py found through galaxy-lib. - Brings in docstring and import order linting fixes from the gxformat2 project (https://github.com/jmchilton/gxformat2) Commit: 5063384a6cbc9a7db9a0f252e561c522a133853c https://github.com/galaxyproject/galaxy/commit/5063384a6cbc9a7db9a0f252e561… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M lib/galaxy/tools/linters/general.py M test/api/workflows_format_2/converter.py M test/api/workflows_format_2/interface.py M test/api/workflows_format_2/main.py Log Message: ----------- Merge pull request #2292 from jmchilton/more_downstream_fixes More small fixes from downstream projects. Compare: https://github.com/galaxyproject/galaxy/compare/cbf569c417e6...5063384a6cbc

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[galaxyproject/galaxy] 85a0a0: Make grunt watch (for scripts) work again, setting...
by GitHub 03 May '16

03 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 85a0a0b7bbc14c57f7759ae7b1d893da341fece5 https://github.com/galaxyproject/galaxy/commit/85a0a0b7bbc14c57f7759ae7b1d8… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M client/grunt-tasks/scripts.js M client/grunt-tasks/style.js Log Message: ----------- Make grunt watch (for scripts) work again, settings were being overwritten by the new watch-style command Commit: cbf569c417e6920d573a63c929c3aa0f594946c2 https://github.com/galaxyproject/galaxy/commit/cbf569c417e6920d573a63c929c3… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M client/grunt-tasks/scripts.js M client/grunt-tasks/style.js Log Message: ----------- Merge pull request #2296 from dannon/watch_fix Make grunt watch (for scripts) work again, settings were being overwr… Compare: https://github.com/galaxyproject/galaxy/compare/13c7143119bd...cbf569c417e6

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[galaxyproject/galaxy] b7cec9: Restore workflow slug editing javascript.
by GitHub 03 May '16

03 May '16

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: b7cec91bca0c36bb9fd49fa775c574c952d4cc65 https://github.com/galaxyproject/galaxy/commit/b7cec91bca0c36bb9fd49fa775c5… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M templates/webapps/galaxy/workflow/sharing.mako Log Message: ----------- Restore workflow slug editing javascript. Commit: 9921fdc2b834ab28da176e9a014b0d970a944cba https://github.com/galaxyproject/galaxy/commit/9921fdc2b834ab28da176e9a014b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M templates/webapps/galaxy/workflow/sharing.mako Log Message: ----------- Remove print from workflow sharing mako. Commit: 2b6359215c8bc1a53281324ebe011c007d2c70b8 https://github.com/galaxyproject/galaxy/commit/2b6359215c8bc1a53281324ebe01… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M templates/sharing_base.mako A templates/slug_editing_js.mako M templates/webapps/galaxy/workflow/sharing.mako Log Message: ----------- Slight refactor to eliminate duplication. Commit: 14944d810d1a8c21db245e35a3571c5b405497f7 https://github.com/galaxyproject/galaxy/commit/14944d810d1a8c21db245e35a357… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M templates/sharing_base.mako M templates/slug_editing_js.mako M templates/webapps/galaxy/workflow/sharing.mako Log Message: ----------- Fix inclusion of javascripts. Commit: 13c7143119bdefa700935b7e30fdd1e1c0f01298 https://github.com/galaxyproject/galaxy/commit/13c7143119bdefa700935b7e30fd… Author: Nitesh Turaga <nitesh.turaga(a)gmail.com> Date: 2016-05-03 (Tue, 03 May 2016) Changed paths: M templates/sharing_base.mako A templates/slug_editing_js.mako M templates/webapps/galaxy/workflow/sharing.mako Log Message: ----------- Merge pull request #2293 from dannon/workflow_sharing_tweaks Workflow sharing slug edit fix. Compare: https://github.com/galaxyproject/galaxy/compare/786a26c473f3...13c7143119bd

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