- galaxy-commits - lists.galaxyproject.org

[galaxyproject/usegalaxy-playbook] 33423b: Increase Blacklight limits
by GitHub 11 May '15

11 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 33423b2892b85ad26a47dc2c8a111de81ec7073c https://github.com/galaxyproject/usegalaxy-playbook/commit/33423b2892b85ad2… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-11 (Mon, 11 May 2015) Changed paths: M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Increase Blacklight limits

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[galaxyproject/usegalaxy-playbook] 90b594: Fix Pulsar staging dir on Blacklight
by GitHub 11 May '15

11 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 90b594b528134c302c6b821f8e2c4a411b3a911f https://github.com/galaxyproject/usegalaxy-playbook/commit/90b594b528134c30… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-11 (Mon, 11 May 2015) Changed paths: M stage/group_vars/pulsarservers.yml M stage/host_vars/login5.stampede.tacc.utexas.edu.yml M stage/host_vars/tg-login2.blacklight.psc.xsede.org.yml Log Message: ----------- Fix Pulsar staging dir on Blacklight

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[galaxyproject/usegalaxy-playbook] 15eaad: Pulsar and Galaxy updates from last week that I ap...
by GitHub 11 May '15

11 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 15eaadf63093a98e53a644b79b544f10ff5c6d1f https://github.com/galaxyproject/usegalaxy-playbook/commit/15eaadf63093a98e… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-11 (Mon, 11 May 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/pulsar_stampede_actions.yml M files/galaxy/usegalaxy.org/config/pulsar_stampede_actions.yml M production/group_vars/all.yml M production/group_vars/pulsarservers.yml M stage/group_vars/all.yml M stage/group_vars/pulsarservers.yml Log Message: ----------- Pulsar and Galaxy updates from last week that I apparently forgot to commit.

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[galaxyproject/usegalaxy-playbook] 9937cf: Update Pulsar again due to facepalm.
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 9937cfa38cef566b743ccf14a3cd48e99a77a43b https://github.com/galaxyproject/usegalaxy-playbook/commit/9937cfa38cef566b… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M production/group_vars/pulsarservers.yml M stage/group_vars/pulsarservers.yml Log Message: ----------- Update Pulsar again due to facepalm.

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[galaxyproject/usegalaxy-playbook] f4c560: Don't stage in tohat_out for resubmit jobs either
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: f4c56005cfbb9416bc47e8ff84733f80d28aaa1c https://github.com/galaxyproject/usegalaxy-playbook/commit/f4c56005cfbb9416… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/pulsar_stampede_actions.yml M files/galaxy/usegalaxy.org/config/pulsar_stampede_actions.yml Log Message: ----------- Don't stage in tohat_out for resubmit jobs either

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[galaxyproject/usegalaxy-playbook] 0c2858: Update Pulsar
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 0c2858c5dcc2a203da560112302096eefe6aa836 https://github.com/galaxyproject/usegalaxy-playbook/commit/0c2858c5dcc2a203… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M production/group_vars/pulsarservers.yml M stage/group_vars/pulsarservers.yml Log Message: ----------- Update Pulsar

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[galaxyproject/usegalaxy-playbook] 28bdd6: update MTS, enable sentry
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 28bdd6d4314c90f59332e1d847c842875bf960e5 https://github.com/galaxyproject/usegalaxy-playbook/commit/28bdd6d4314c90f5… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M production/group_vars/toolshedservers.yml Log Message: ----------- update MTS, enable sentry

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[galaxyproject/usegalaxy-playbook] 02483b: update TTS
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 02483b37f869a92b4eb21c2dac839689372e1081 https://github.com/galaxyproject/usegalaxy-playbook/commit/02483b37f869a92b… Author: Martin Cech <cech.marten(a)gmail.com> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M stage/group_vars/toolshedservers.yml Log Message: ----------- update TTS

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[galaxyproject/usegalaxy-playbook] 65b219: Mutable configs
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 65b219a203ed2ff472a28e5ed1a36855c8a97cd2 https://github.com/galaxyproject/usegalaxy-playbook/commit/65b219a203ed2ff4… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_data_manager_conf.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_data_table_conf.xml Log Message: ----------- Mutable configs Commit: 0833888e305616865b968c1d984a21cdba4cf1f5 https://github.com/galaxyproject/usegalaxy-playbook/commit/0833888e30561686… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/pulsar_stampede_actions.yml M files/galaxy/usegalaxy.org/config/pulsar_stampede_actions.yml Log Message: ----------- Don't stage ref.fai as used by cufflinks, this is a hack until job working directories are cleaned prior to resubmission. Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/ddcb44e2f4bb...…

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[galaxyproject/usegalaxy-playbook] ee3bf0: Add destination for kraken.
by GitHub 06 May '15

06 May '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: ee3bf0febd95b2ecd2a3d284798e9510efa7a5ec https://github.com/galaxyproject/usegalaxy-playbook/commit/ee3bf0febd95b2ec… Author: Dave B. <dave(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Add destination for kraken. Commit: ddcb44e2f4bba0b064ecb2624cde2b585108b291 https://github.com/galaxyproject/usegalaxy-playbook/commit/ddcb44e2f4bba0b0… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-05-06 (Wed, 06 May 2015) Changed paths: M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Merge pull request #3 from davebx/slurm_multi_highmem Add destination for kraken. Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/029d714a41a6...…

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