- galaxy-commits - lists.galaxyproject.org

[galaxyproject/usegalaxy-playbook] dab5ca: Increase threads for test-installer (5 is the past...
by GitHub 06 Mar '15

06 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: dab5ca13c4d004d415194c9f773007c1333cc6f2 https://github.com/galaxyproject/usegalaxy-playbook/commit/dab5ca13c4d004d4… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-06 (Fri, 06 Mar 2015) Changed paths: M stage/group_vars/galaxyservers.yml Log Message: ----------- Increase threads for test-installer (5 is the paste minimum).

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[galaxyproject/usegalaxy-playbook] 610a85: Re-enable Stampede jobs on Main.
by GitHub 06 Mar '15

06 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 610a858cd3e08959259d39d0b5232bf2a0815236 https://github.com/galaxyproject/usegalaxy-playbook/commit/610a858cd3e08959… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-06 (Fri, 06 Mar 2015) Changed paths: M templates/galaxy/usegalaxy.org/config/job_conf.xml.j2 Log Message: ----------- Re-enable Stampede jobs on Main.

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[galaxyproject/usegalaxy-playbook] 270a1b: Restore integrated_tool_panel.xml after mangling.
by GitHub 06 Mar '15

06 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 270a1b39aa0b413dd6480e78c2d64c8b1d3ae90b https://github.com/galaxyproject/usegalaxy-playbook/commit/270a1b39aa0b413d… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-06 (Fri, 06 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml Log Message: ----------- Restore integrated_tool_panel.xml after mangling.

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[galaxyproject/usegalaxy-playbook] 69c587: Remove ssl client auth options for Pulsar AMQP.
by GitHub 06 Mar '15

06 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 69c587e73ab51cdf10ff802882c1929c98ee6827 https://github.com/galaxyproject/usegalaxy-playbook/commit/69c587e73ab51cdf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-06 (Fri, 06 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M stage/secret_vars/galaxyservers.yml M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Remove ssl client auth options for Pulsar AMQP.

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[galaxyproject/usegalaxy-playbook] cefefe: Upgrade galaxy role to 0.5.1.
by GitHub 05 Mar '15

05 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: cefefe7b7386e8dd3db682586f3eea6d81d6dc6d https://github.com/galaxyproject/usegalaxy-playbook/commit/cefefe7b7386e8dd… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-05 (Thu, 05 Mar 2015) Changed paths: M roles/galaxyprojectdotorg.galaxy/README.md M roles/galaxyprojectdotorg.galaxy/defaults/main.yml A roles/galaxyprojectdotorg.galaxy/files/makepyc.py M roles/galaxyprojectdotorg.galaxy/meta/.galaxy_install_info M roles/galaxyprojectdotorg.galaxy/meta/main.yml M roles/galaxyprojectdotorg.galaxy/tasks/clone.yml M roles/galaxyprojectdotorg.galaxy/tasks/database.yml A roles/galaxyprojectdotorg.galaxy/tasks/download.yml M roles/galaxyprojectdotorg.galaxy/tasks/eggs.yml M roles/galaxyprojectdotorg.galaxy/tasks/main.yml A roles/galaxyprojectdotorg.galaxy/tasks/virtualenv.yml Log Message: ----------- Upgrade galaxy role to 0.5.1. Commit: bfc5faa96e044c43a6d2d96b562f49f205afdb77 https://github.com/galaxyproject/usegalaxy-playbook/commit/bfc5faa96e044c43… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-05 (Thu, 05 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/nagios_tool_conf.xml M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_data_manager_conf.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_data_table_conf.xml M galaxy.yml M galaxy_infrastructure.yml M galaxy_static.yml M pulsar.yml R roles/usegalaxy/defaults/main.yml M roles/usegalaxy/tasks/main.yml A roles/usegalaxy_privileged/defaults/main.yml A roles/usegalaxy_privileged/tasks/main.yml M roles/usegalaxy_static/tasks/main.yml M stage/group_vars/all.yml M stage/group_vars/galaxyservers.yml M stage/inventory M stage/secret_vars/galaxyservers.yml M templates/galaxy/common/static/welcome.html.j2 A templates/galaxy/test.galaxyproject.org/config/disposable_email_blacklist.c… A templates/galaxy/test.galaxyproject.org/config/reports.ini.j2 M templates/supervisor/galaxy.conf.j2 M templates/supervisor/galaxy_impersonate.conf.j2 M templates/supervisor/galaxy_installer.conf.j2 M templates/supervisor/galaxy_reports.conf.j2 Log Message: ----------- Pull from Git, also change the directory structure both locally (for the web processes) and for the shared (handler) clones. Galaxy is now 100% readonly and the clone should be unmodified, with the exception of compiled bytecode. Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/51666b9662e5...…

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[galaxyproject/ansible-galaxy]
by GitHub 05 Mar '15

05 Mar '15

Branch: refs/tags/0.5.1 Home: https://github.com/galaxyproject/ansible-galaxy

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[galaxyproject/ansible-galaxy] 6d3126: A few additional features for git and running a re...
by GitHub 05 Mar '15

05 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/ansible-galaxy Commit: 6d31263e7acc4f3e0d9611f1889e7938d1c2ff20 https://github.com/galaxyproject/ansible-galaxy/commit/6d31263e7acc4f3e0d96… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-05 (Thu, 05 Mar 2015) Changed paths: M defaults/main.yml A files/makepyc.py M tasks/clone.yml M tasks/database.yml M tasks/eggs.yml Log Message: ----------- A few additional features for git and running a read-only clone: - Do not allow git to overwrite local clone changes. - Ensure openid_consumer_cache_path defaults to a subdirectory of galaxy_mutable_data_dir - Locate orphaned .pyc files (ones that do not have a corresponding .py file) and remove them. - Compile .py files into bytecode. - Honor the `$GALAXY_EGGS_PATH` environment variable when doing anything with eggs.

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[galaxyproject/usegalaxy-playbook] 51666b: Increase memory of picard tools on Main
by GitHub 04 Mar '15

04 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 51666b9662e5d855371cebbf720799cdf232e480 https://github.com/galaxyproject/usegalaxy-playbook/commit/51666b9662e5d855… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-04 (Wed, 04 Mar 2015) Changed paths: M templates/galaxy/usegalaxy.org/config/job_conf.xml.j2 Log Message: ----------- Increase memory of picard tools on Main

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[galaxyproject/ansible-galaxy] 5d3d66: Make download URL configurable (so can target gith...
by GitHub 04 Mar '15

04 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/ansible-galaxy Commit: 5d3d66044ee4a97cb4f133ddf33c9cb507a39ac4 https://github.com/galaxyproject/ansible-galaxy/commit/5d3d66044ee4a97cb4f1… Author: John Chilton <jmchilton(a)gmail.com> Date: 2015-03-04 (Wed, 04 Mar 2015) Changed paths: M defaults/main.yml M tasks/download.yml Log Message: ----------- Make download URL configurable (so can target github forks).

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[galaxyproject/usegalaxy-playbook] fdc267: Update Main
by GitHub 03 Mar '15

03 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: fdc26791931ac51c4651ad351a85bf8d00c3818e https://github.com/galaxyproject/usegalaxy-playbook/commit/fdc26791931ac51c… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-03 (Tue, 03 Mar 2015) Changed paths: M production/group_vars/all.yml Log Message: ----------- Update Main

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