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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_18.09 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Commit: 06cfb7e206357718e530c9afa6723c205b664927 https://github.com/galaxyproject/galaxy/commit/06cfb7e206357718e530c9afa672… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.01' into release_17.05 Commit: fdd9a091f86c312c4995a47dc674814609a5519c https://github.com/galaxyproject/galaxy/commit/fdd9a091f86c312c4995a47dc674… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.05' into release_17.09 Commit: 6feef2a2801e15a770997a3dd9556ca46d6c2ca5 https://github.com/galaxyproject/galaxy/commit/6feef2a2801e15a770997a3dd955… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.09' into release_18.01 Commit: bfc634e41536e53fcf05ba97714c48dc8fbcccf4 https://github.com/galaxyproject/galaxy/commit/bfc634e41536e53fcf05ba97714c… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_18.01' into release_18.05 Commit: 65ca25ed669f4cea983d86460f614666ba3571d1 https://github.com/galaxyproject/galaxy/commit/65ca25ed669f4cea983d86460f61… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Log Message: ----------- Merge branch 'release_18.05' into release_18.09 Compare: https://github.com/galaxyproject/galaxy/compare/7dd7d8a5e99d...65ca25ed669f **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_18.05 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Commit: 06cfb7e206357718e530c9afa6723c205b664927 https://github.com/galaxyproject/galaxy/commit/06cfb7e206357718e530c9afa672… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.01' into release_17.05 Commit: fdd9a091f86c312c4995a47dc674814609a5519c https://github.com/galaxyproject/galaxy/commit/fdd9a091f86c312c4995a47dc674… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.05' into release_17.09 Commit: 6feef2a2801e15a770997a3dd9556ca46d6c2ca5 https://github.com/galaxyproject/galaxy/commit/6feef2a2801e15a770997a3dd955… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.09' into release_18.01 Commit: bfc634e41536e53fcf05ba97714c48dc8fbcccf4 https://github.com/galaxyproject/galaxy/commit/bfc634e41536e53fcf05ba97714c… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_18.01' into release_18.05 Compare: https://github.com/galaxyproject/galaxy/compare/9a6fddcdca70...bfc634e41536 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

1 0

[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_18.01 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Commit: 06cfb7e206357718e530c9afa6723c205b664927 https://github.com/galaxyproject/galaxy/commit/06cfb7e206357718e530c9afa672… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.01' into release_17.05 Commit: fdd9a091f86c312c4995a47dc674814609a5519c https://github.com/galaxyproject/galaxy/commit/fdd9a091f86c312c4995a47dc674… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.05' into release_17.09 Commit: 6feef2a2801e15a770997a3dd9556ca46d6c2ca5 https://github.com/galaxyproject/galaxy/commit/6feef2a2801e15a770997a3dd955… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.09' into release_18.01 Compare: https://github.com/galaxyproject/galaxy/compare/988d308a12f3...6feef2a2801e **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Commit: 06cfb7e206357718e530c9afa6723c205b664927 https://github.com/galaxyproject/galaxy/commit/06cfb7e206357718e530c9afa672… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.01' into release_17.05 Commit: fdd9a091f86c312c4995a47dc674814609a5519c https://github.com/galaxyproject/galaxy/commit/fdd9a091f86c312c4995a47dc674… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.05' into release_17.09 Compare: https://github.com/galaxyproject/galaxy/compare/40cecf6ff421...fdd9a091f86c **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

1 0

[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_17.05 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Commit: 06cfb7e206357718e530c9afa6723c205b664927 https://github.com/galaxyproject/galaxy/commit/06cfb7e206357718e530c9afa672… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_17.01' into release_17.05 Compare: https://github.com/galaxyproject/galaxy/compare/c4150d200214...06cfb7e20635 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

1 0

[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_17.01 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Commit: 1b30a9a1b98e40befb34eb7c5197610d4eea786f https://github.com/galaxyproject/galaxy/commit/1b30a9a1b98e40befb34eb7c5197… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.10' into release_17.01 Compare: https://github.com/galaxyproject/galaxy/compare/fa7f2a4f5c18...1b30a9a1b98e **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_16.10 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Commit: a2e70ef67ec9899af50720aac9f3bf16cbc636ac https://github.com/galaxyproject/galaxy/commit/a2e70ef67ec9899af50720aac9f3… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.07' into release_16.10 Compare: https://github.com/galaxyproject/galaxy/compare/809ae58c52ed...a2e70ef67ec9 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_16.07 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Commit: f3c81816db24d7a0b0f3909919c6ca41664fb50d https://github.com/galaxyproject/galaxy/commit/f3c81816db24d7a0b0f3909919c6… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Compare: https://github.com/galaxyproject/galaxy/compare/8a1616aaf816...f3c81816db24 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_16.04 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Commit: 87fa60939696fb4ecbf157e124eacd7afe4c9243 https://github.com/galaxyproject/galaxy/commit/87fa60939696fb4ecbf157e124ea… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge branch 'release_16.01' into release_16.04 Compare: https://github.com/galaxyproject/galaxy/compare/482f1ea35971...87fa60939696 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

1 0

[galaxyproject/galaxy] 0e5c96: Drop "Galaxy pip" in favor of manylinux1 wheels (w...
by GitHub 16 Dec '18

16 Dec '18

Branch: refs/heads/release_16.01 Home: https://github.com/galaxyproject/galaxy Commit: 0e5c96ef3710612bf1171e7094cf7d5427387ecb https://github.com/galaxyproject/galaxy/commit/0e5c96ef3710612bf1171e7094cf… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Drop "Galaxy pip" in favor of manylinux1 wheels (which are supported in pip >= 8.1). Commit: b10cfa43ac547eaecbd996cef7201170a0e0da8c https://github.com/galaxyproject/galaxy/commit/b10cfa43ac547eaecbd996cef720… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M scripts/common_startup.sh Log Message: ----------- Remove unused $GXPIP_VERSION Commit: efe84751a7bf84b2297df7b77b514b8425fe7c70 https://github.com/galaxyproject/galaxy/commit/efe84751a7bf84b2297df7b77b51… Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk> Date: 2018-12-11 (Tue, 11 Dec 2018) Changed paths: M .travis.yml Log Message: ----------- Add workaround for https://github.com/travis-ci/travis-ci/issues/7940 Commit: 8f14121518d1298f5a603e8e52ae5c05212e6360 https://github.com/galaxyproject/galaxy/commit/8f14121518d1298f5a603e8e52ae… Author: Nicola Soranzo <nicola.soranzo(a)gmail.com> Date: 2018-12-16 (Sun, 16 Dec 2018) Changed paths: M .travis.yml M scripts/common_startup.sh Log Message: ----------- Merge pull request #7094 from nsoranzo/release_16.01_backport_2383 [16.01] Backport #2383 Compare: https://github.com/galaxyproject/galaxy/compare/f3ba9e2b9e92...8f14121518d1 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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