I'm trying to make an update ... I' have done the following commands
hg pull
hg update -C latest_15.05
./run.sh
"Exception: Your database has version '118' but this code expects
version '129'. Please backup your database and then migrate the
schema by running 'sh manage_db.sh -c ./universe_wsgi.ini upgrade'."
sh manage_db.sh -c ./universe_wsgi.ini upgrade
sh ./scripts/migrate_tools/0012_tools.sh -c universe_wsgi.ini
install_dependencies
I have the following error and i don't know what it means :
No handlers could be found for logger "galaxy.tools.data"
Traceback (most recent call last):
File "./scripts/migrate_tools/migrate_tools.py", line 21, in <module>
app = MigrateToolsApplication( sys.argv[ 1 ] )
File "/Users/galaxy_dev_user/galaxy-dist/lib/tool_shed/galaxy_install/migrate/common.py",
line 41, in __init__
self._configure_toolbox()
File "/Users/galaxy_dev_user/galaxy-dist/lib/galaxy/config.py", line
748, in _configure_toolbox
self.toolbox = tools.ToolBox( tool_configs, self.config.tool_path, self )
File "/Users/galaxy_dev_user/galaxy-dist/lib/galaxy/tools/__init__.py",
line 106, in __init__
app=app,
File "/Users/galaxy_dev_user/galaxy-dist/lib/galaxy/tools/toolbox/base.py",
line 78, in __init__
self._load_tool_panel()
File "/Users/galaxy_dev_user/galaxy-dist/lib/galaxy/tools/toolbox/base.py",
line 312, in _load_tool_panel
self.__add_tool_to_tool_panel( val, self._tool_panel, section=False )
File "/Users/galaxy_dev_user/galaxy-dist/lib/galaxy/tools/toolbox/base.py",
line 251, in __add_tool_to_tool_panel
tool = self._tools_by_id[ tool_id ]
KeyError: 'tool_test'
--
*Jean-Philippe Villemin *- Bioinformatics, Software Engineer -
IURC (Institut Universitaire de Recherche Clinique)
641 avenue du Doyen Gaston Giraud
34093 Montpellier Cedex 5, France
*Jean-Philippe.VILLEMIN(a)inserm.fr <Jean-Philippe.VILLEMIN(a)inserm.fr>*