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[hg] galaxy 3407: Fix jquery script packing
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/68dac4d2d94a changeset: 3407:68dac4d2d94a user: James Taylor <james(a)jamestaylor.org> date: Wed Feb 17 13:54:44 2010 -0500 description: Fix jquery script packing diffstat: static/scripts/pack_scripts.py | 2 +- static/scripts/packed/jquery.js | 4365 +-------------------------------------- 2 files changed, 5 insertions(+), 4362 deletions(-) diffs (truncated from 4394 to 3000 lines): diff -r 297d8c9c5eb0 -r 68dac4d2d94a static/scripts/pack_scripts.py --- a/static/scripts/pack_scripts.py Wed Feb 17 12:45:32 2010 -0500 +++ b/static/scripts/pack_scripts.py Wed Feb 17 13:54:44 2010 -0500 @@ -8,7 +8,7 @@ from os import path # Scripts that should not be packed -- just copied -do_not_pack = ['jquery.js'] +do_not_pack = set() cmd = "java -jar ../../scripts/yuicompressor.jar --type js %(fname)s -o packed/%(fname)s" diff -r 297d8c9c5eb0 -r 68dac4d2d94a static/scripts/packed/jquery.js --- a/static/scripts/packed/jquery.js Wed Feb 17 12:45:32 2010 -0500 +++ b/static/scripts/packed/jquery.js Wed Feb 17 13:54:44 2010 -0500 @@ -1,4 +1,4 @@ -/*! +/* * jQuery JavaScript Library v1.3.2 * http://jquery.com/ * @@ -9,4368 +9,11 @@ * Date: 2009-02-19 17:34:21 -0500 (Thu, 19 Feb 2009) * Revision: 6246 */ -(function(){ - -var - // Will speed up references to window, and allows munging its name. - window = this, - // Will speed up references to undefined, and allows munging its name. - undefined, - // Map over jQuery in case of overwrite - _jQuery = window.jQuery, - // Map over the $ in case of overwrite - _$ = window.$, - - jQuery = window.jQuery = window.$ = function( selector, context ) { - // The jQuery object is actually just the init constructor 'enhanced' - return new jQuery.fn.init( selector, context ); - }, - - // A simple way to check for HTML strings or ID strings - // (both of which we optimize for) - quickExpr = /^[^<]*(<(.|\s)+>)[^>]*$|^#([\w-]+)$/, - // Is it a simple selector - isSimple = /^.[^:#\[\.,]*$/; - -jQuery.fn = jQuery.prototype = { - init: function( selector, context ) { - // Make sure that a selection was provided - selector = selector || document; - - // Handle $(DOMElement) - if ( selector.nodeType ) { - this[0] = selector; - this.length = 1; - this.context = selector; - return this; - } - // Handle HTML strings - if ( typeof selector === "string" ) { - // Are we dealing with HTML string or an ID? - var match = quickExpr.exec( selector ); - - // Verify a match, and that no context was specified for #id - if ( match && (match[1] || !context) ) { - - // HANDLE: $(html) -> $(array) - if ( match[1] ) - selector = jQuery.clean( [ match[1] ], context ); - - // HANDLE: $("#id") - else { - var elem = document.getElementById( match[3] ); - - // Handle the case where IE and Opera return items - // by name instead of ID - if ( elem && elem.id != match[3] ) - return jQuery().find( selector ); - - // Otherwise, we inject the element directly into the jQuery object - var ret = jQuery( elem || [] ); - ret.context = document; - ret.selector = selector; - return ret; - } - - // HANDLE: $(expr, [context]) - // (which is just equivalent to: $(content).find(expr) - } else - return jQuery( context ).find( selector ); - - // HANDLE: $(function) - // Shortcut for document ready - } else if ( jQuery.isFunction( selector ) ) - return jQuery( document ).ready( selector ); - - // Make sure that old selector state is passed along - if ( selector.selector && selector.context ) { - this.selector = selector.selector; - this.context = selector.context; - } - - return this.setArray(jQuery.isArray( selector ) ? - selector : - jQuery.makeArray(selector)); - }, - - // Start with an empty selector - selector: "", - - // The current version of jQuery being used - jquery: "1.3.2", - - // The number of elements contained in the matched element set - size: function() { - return this.length; - }, - - // Get the Nth element in the matched element set OR - // Get the whole matched element set as a clean array - get: function( num ) { - return num === undefined ? - - // Return a 'clean' array - Array.prototype.slice.call( this ) : - - // Return just the object - this[ num ]; - }, - - // Take an array of elements and push it onto the stack - // (returning the new matched element set) - pushStack: function( elems, name, selector ) { - // Build a new jQuery matched element set - var ret = jQuery( elems ); - - // Add the old object onto the stack (as a reference) - ret.prevObject = this; - - ret.context = this.context; - - if ( name === "find" ) - ret.selector = this.selector + (this.selector ? " " : "") + selector; - else if ( name ) - ret.selector = this.selector + "." + name + "(" + selector + ")"; - - // Return the newly-formed element set - return ret; - }, - - // Force the current matched set of elements to become - // the specified array of elements (destroying the stack in the process) - // You should use pushStack() in order to do this, but maintain the stack - setArray: function( elems ) { - // Resetting the length to 0, then using the native Array push - // is a super-fast way to populate an object with array-like properties - this.length = 0; - Array.prototype.push.apply( this, elems ); - - return this; - }, - - // Execute a callback for every element in the matched set. - // (You can seed the arguments with an array of args, but this is - // only used internally.) - each: function( callback, args ) { - return jQuery.each( this, callback, args ); - }, - - // Determine the position of an element within - // the matched set of elements - index: function( elem ) { - // Locate the position of the desired element - return jQuery.inArray( - // If it receives a jQuery object, the first element is used - elem && elem.jquery ? elem[0] : elem - , this ); - }, - - attr: function( name, value, type ) { - var options = name; - - // Look for the case where we're accessing a style value - if ( typeof name === "string" ) - if ( value === undefined ) - return this[0] && jQuery[ type || "attr" ]( this[0], name ); - - else { - options = {}; - options[ name ] = value; - } - - // Check to see if we're setting style values - return this.each(function(i){ - // Set all the styles - for ( name in options ) - jQuery.attr( - type ? - this.style : - this, - name, jQuery.prop( this, options[ name ], type, i, name ) - ); - }); - }, - - css: function( key, value ) { - // ignore negative width and height values - if ( (key == 'width' || key == 'height') && parseFloat(value) < 0 ) - value = undefined; - return this.attr( key, value, "curCSS" ); - }, - - text: function( text ) { - if ( typeof text !== "object" && text != null ) - return this.empty().append( (this[0] && this[0].ownerDocument || document).createTextNode( text ) ); - - var ret = ""; - - jQuery.each( text || this, function(){ - jQuery.each( this.childNodes, function(){ - if ( this.nodeType != 8 ) - ret += this.nodeType != 1 ? - this.nodeValue : - jQuery.fn.text( [ this ] ); - }); - }); - - return ret; - }, - - wrapAll: function( html ) { - if ( this[0] ) { - // The elements to wrap the target around - var wrap = jQuery( html, this[0].ownerDocument ).clone(); - - if ( this[0].parentNode ) - wrap.insertBefore( this[0] ); - - wrap.map(function(){ - var elem = this; - - while ( elem.firstChild ) - elem = elem.firstChild; - - return elem; - }).append(this); - } - - return this; - }, - - wrapInner: function( html ) { - return this.each(function(){ - jQuery( this ).contents().wrapAll( html ); - }); - }, - - wrap: function( html ) { - return this.each(function(){ - jQuery( this ).wrapAll( html ); - }); - }, - - append: function() { - return this.domManip(arguments, true, function(elem){ - if (this.nodeType == 1) - this.appendChild( elem ); - }); - }, - - prepend: function() { - return this.domManip(arguments, true, function(elem){ - if (this.nodeType == 1) - this.insertBefore( elem, this.firstChild ); - }); - }, - - before: function() { - return this.domManip(arguments, false, function(elem){ - this.parentNode.insertBefore( elem, this ); - }); - }, - - after: function() { - return this.domManip(arguments, false, function(elem){ - this.parentNode.insertBefore( elem, this.nextSibling ); - }); - }, - - end: function() { - return this.prevObject || jQuery( [] ); - }, - - // For internal use only. - // Behaves like an Array's method, not like a jQuery method. - push: [].push, - sort: [].sort, - splice: [].splice, - - find: function( selector ) { - if ( this.length === 1 ) { - var ret = this.pushStack( [], "find", selector ); - ret.length = 0; - jQuery.find( selector, this[0], ret ); - return ret; - } else { - return this.pushStack( jQuery.unique(jQuery.map(this, function(elem){ - return jQuery.find( selector, elem ); - })), "find", selector ); - } - }, - - clone: function( events ) { - // Do the clone - var ret = this.map(function(){ - if ( !jQuery.support.noCloneEvent && !jQuery.isXMLDoc(this) ) { - // IE copies events bound via attachEvent when - // using cloneNode. Calling detachEvent on the - // clone will also remove the events from the orignal - // In order to get around this, we use innerHTML. - // Unfortunately, this means some modifications to - // attributes in IE that are actually only stored - // as properties will not be copied (such as the - // the name attribute on an input). - var html = this.outerHTML; - if ( !html ) { - var div = this.ownerDocument.createElement("div"); - div.appendChild( this.cloneNode(true) ); - html = div.innerHTML; - } - - return jQuery.clean([html.replace(/ jQuery\d+="(?:\d+|null)"/g, "").replace(/^\s*/, "")])[0]; - } else - return this.cloneNode(true); - }); - - // Copy the events from the original to the clone - if ( events === true ) { - var orig = this.find("*").andSelf(), i = 0; - - ret.find("*").andSelf().each(function(){ - if ( this.nodeName !== orig[i].nodeName ) - return; - - var events = jQuery.data( orig[i], "events" ); - - for ( var type in events ) { - for ( var handler in events[ type ] ) { - jQuery.event.add( this, type, events[ type ][ handler ], events[ type ][ handler ].data ); - } - } - - i++; - }); - } - - // Return the cloned set - return ret; - }, - - filter: function( selector ) { - return this.pushStack( - jQuery.isFunction( selector ) && - jQuery.grep(this, function(elem, i){ - return selector.call( elem, i ); - }) || - - jQuery.multiFilter( selector, jQuery.grep(this, function(elem){ - return elem.nodeType === 1; - }) ), "filter", selector ); - }, - - closest: function( selector ) { - var pos = jQuery.expr.match.POS.test( selector ) ? jQuery(selector) : null, - closer = 0; - - return this.map(function(){ - var cur = this; - while ( cur && cur.ownerDocument ) { - if ( pos ? pos.index(cur) > -1 : jQuery(cur).is(selector) ) { - jQuery.data(cur, "closest", closer); - return cur; - } - cur = cur.parentNode; - closer++; - } - }); - }, - - not: function( selector ) { - if ( typeof selector === "string" ) - // test special case where just one selector is passed in - if ( isSimple.test( selector ) ) - return this.pushStack( jQuery.multiFilter( selector, this, true ), "not", selector ); - else - selector = jQuery.multiFilter( selector, this ); - - var isArrayLike = selector.length && selector[selector.length - 1] !== undefined && !selector.nodeType; - return this.filter(function() { - return isArrayLike ? jQuery.inArray( this, selector ) < 0 : this != selector; - }); - }, - - add: function( selector ) { - return this.pushStack( jQuery.unique( jQuery.merge( - this.get(), - typeof selector === "string" ? - jQuery( selector ) : - jQuery.makeArray( selector ) - ))); - }, - - is: function( selector ) { - return !!selector && jQuery.multiFilter( selector, this ).length > 0; - }, - - hasClass: function( selector ) { - return !!selector && this.is( "." + selector ); - }, - - val: function( value ) { - if ( value === undefined ) { - var elem = this[0]; - - if ( elem ) { - if( jQuery.nodeName( elem, 'option' ) ) - return (elem.attributes.value || {}).specified ? elem.value : elem.text; - - // We need to handle select boxes special - if ( jQuery.nodeName( elem, "select" ) ) { - var index = elem.selectedIndex, - values = [], - options = elem.options, - one = elem.type == "select-one"; - - // Nothing was selected - if ( index < 0 ) - return null; - - // Loop through all the selected options - for ( var i = one ? index : 0, max = one ? index + 1 : options.length; i < max; i++ ) { - var option = options[ i ]; - - if ( option.selected ) { - // Get the specifc value for the option - value = jQuery(option).val(); - - // We don't need an array for one selects - if ( one ) - return value; - - // Multi-Selects return an array - values.push( value ); - } - } - - return values; - } - - // Everything else, we just grab the value - return (elem.value || "").replace(/\r/g, ""); - - } - - return undefined; - } - - if ( typeof value === "number" ) - value += ''; - - return this.each(function(){ - if ( this.nodeType != 1 ) - return; - - if ( jQuery.isArray(value) && /radio|checkbox/.test( this.type ) ) - this.checked = (jQuery.inArray(this.value, value) >= 0 || - jQuery.inArray(this.name, value) >= 0); - - else if ( jQuery.nodeName( this, "select" ) ) { - var values = jQuery.makeArray(value); - - jQuery( "option", this ).each(function(){ - this.selected = (jQuery.inArray( this.value, values ) >= 0 || - jQuery.inArray( this.text, values ) >= 0); - }); - - if ( !values.length ) - this.selectedIndex = -1; - - } else - this.value = value; - }); - }, - - html: function( value ) { - return value === undefined ? - (this[0] ? - this[0].innerHTML.replace(/ jQuery\d+="(?:\d+|null)"/g, "") : - null) : - this.empty().append( value ); - }, - - replaceWith: function( value ) { - return this.after( value ).remove(); - }, - - eq: function( i ) { - return this.slice( i, +i + 1 ); - }, - - slice: function() { - return this.pushStack( Array.prototype.slice.apply( this, arguments ), - "slice", Array.prototype.slice.call(arguments).join(",") ); - }, - - map: function( callback ) { - return this.pushStack( jQuery.map(this, function(elem, i){ - return callback.call( elem, i, elem ); - })); - }, - - andSelf: function() { - return this.add( this.prevObject ); - }, - - domManip: function( args, table, callback ) { - if ( this[0] ) { - var fragment = (this[0].ownerDocument || this[0]).createDocumentFragment(), - scripts = jQuery.clean( args, (this[0].ownerDocument || this[0]), fragment ), - first = fragment.firstChild; - - if ( first ) - for ( var i = 0, l = this.length; i < l; i++ ) - callback.call( root(this[i], first), this.length > 1 || i > 0 ? - fragment.cloneNode(true) : fragment ); - - if ( scripts ) - jQuery.each( scripts, evalScript ); - } - - return this; - - function root( elem, cur ) { - return table && jQuery.nodeName(elem, "table") && jQuery.nodeName(cur, "tr") ? - (elem.getElementsByTagName("tbody")[0] || - elem.appendChild(elem.ownerDocument.createElement("tbody"))) : - elem; - } - } -}; - -// Give the init function the jQuery prototype for later instantiation -jQuery.fn.init.prototype = jQuery.fn; - -function evalScript( i, elem ) { - if ( elem.src ) - jQuery.ajax({ - url: elem.src, - async: false, - dataType: "script" - }); - - else - jQuery.globalEval( elem.text || elem.textContent || elem.innerHTML || "" ); - - if ( elem.parentNode ) - elem.parentNode.removeChild( elem ); -} - -function now(){ - return +new Date; -} - -jQuery.extend = jQuery.fn.extend = function() { - // copy reference to target object - var target = arguments[0] || {}, i = 1, length = arguments.length, deep = false, options; - - // Handle a deep copy situation - if ( typeof target === "boolean" ) { - deep = target; - target = arguments[1] || {}; - // skip the boolean and the target - i = 2; - } - - // Handle case when target is a string or something (possible in deep copy) - if ( typeof target !== "object" && !jQuery.isFunction(target) ) - target = {}; - - // extend jQuery itself if only one argument is passed - if ( length == i ) { - target = this; - --i; - } - - for ( ; i < length; i++ ) - // Only deal with non-null/undefined values - if ( (options = arguments[ i ]) != null ) - // Extend the base object - for ( var name in options ) { - var src = target[ name ], copy = options[ name ]; - - // Prevent never-ending loop - if ( target === copy ) - continue; - - // Recurse if we're merging object values - if ( deep && copy && typeof copy === "object" && !copy.nodeType ) - target[ name ] = jQuery.extend( deep, - // Never move original objects, clone them - src || ( copy.length != null ? [ ] : { } ) - , copy ); - - // Don't bring in undefined values - else if ( copy !== undefined ) - target[ name ] = copy; - - } - - // Return the modified object - return target; -}; - -// exclude the following css properties to add px -var exclude = /z-?index|font-?weight|opacity|zoom|line-?height/i, - // cache defaultView - defaultView = document.defaultView || {}, - toString = Object.prototype.toString; - -jQuery.extend({ - noConflict: function( deep ) { - window.$ = _$; - - if ( deep ) - window.jQuery = _jQuery; - - return jQuery; - }, - - // See test/unit/core.js for details concerning isFunction. - // Since version 1.3, DOM methods and functions like alert - // aren't supported. They return false on IE (#2968). - isFunction: function( obj ) { - return toString.call(obj) === "[object Function]"; - }, - - isArray: function( obj ) { - return toString.call(obj) === "[object Array]"; - }, - - // check if an element is in a (or is an) XML document - isXMLDoc: function( elem ) { - return elem.nodeType === 9 && elem.documentElement.nodeName !== "HTML" || - !!elem.ownerDocument && jQuery.isXMLDoc( elem.ownerDocument ); - }, - - // Evalulates a script in a global context - globalEval: function( data ) { - if ( data && /\S/.test(data) ) { - // Inspired by code by Andrea Giammarchi - // http://webreflection.blogspot.com/2007/08/global-scope-evaluation-and-dom.h… - var head = document.getElementsByTagName("head")[0] || document.documentElement, - script = document.createElement("script"); - - script.type = "text/javascript"; - if ( jQuery.support.scriptEval ) - script.appendChild( document.createTextNode( data ) ); - else - script.text = data; - - // Use insertBefore instead of appendChild to circumvent an IE6 bug. - // This arises when a base node is used (#2709). - head.insertBefore( script, head.firstChild ); - head.removeChild( script ); - } - }, - - nodeName: function( elem, name ) { - return elem.nodeName && elem.nodeName.toUpperCase() == name.toUpperCase(); - }, - - // args is for internal usage only - each: function( object, callback, args ) { - var name, i = 0, length = object.length; - - if ( args ) { - if ( length === undefined ) { - for ( name in object ) - if ( callback.apply( object[ name ], args ) === false ) - break; - } else - for ( ; i < length; ) - if ( callback.apply( object[ i++ ], args ) === false ) - break; - - // A special, fast, case for the most common use of each - } else { - if ( length === undefined ) { - for ( name in object ) - if ( callback.call( object[ name ], name, object[ name ] ) === false ) - break; - } else - for ( var value = object[0]; - i < length && callback.call( value, i, value ) !== false; value = object[++i] ){} - } - - return object; - }, - - prop: function( elem, value, type, i, name ) { - // Handle executable functions - if ( jQuery.isFunction( value ) ) - value = value.call( elem, i ); - - // Handle passing in a number to a CSS property - return typeof value === "number" && type == "curCSS" && !exclude.test( name ) ? - value + "px" : - value; - }, - - className: { - // internal only, use addClass("class") - add: function( elem, classNames ) { - jQuery.each((classNames || "").split(/\s+/), function(i, className){ - if ( elem.nodeType == 1 && !jQuery.className.has( elem.className, className ) ) - elem.className += (elem.className ? " " : "") + className; - }); - }, - - // internal only, use removeClass("class") - remove: function( elem, classNames ) { - if (elem.nodeType == 1) - elem.className = classNames !== undefined ? - jQuery.grep(elem.className.split(/\s+/), function(className){ - return !jQuery.className.has( classNames, className ); - }).join(" ") : - ""; - }, - - // internal only, use hasClass("class") - has: function( elem, className ) { - return elem && jQuery.inArray( className, (elem.className || elem).toString().split(/\s+/) ) > -1; - } - }, - - // A method for quickly swapping in/out CSS properties to get correct calculations - swap: function( elem, options, callback ) { - var old = {}; - // Remember the old values, and insert the new ones - for ( var name in options ) { - old[ name ] = elem.style[ name ]; - elem.style[ name ] = options[ name ]; - } - - callback.call( elem ); - - // Revert the old values - for ( var name in options ) - elem.style[ name ] = old[ name ]; - }, - - css: function( elem, name, force, extra ) { - if ( name == "width" || name == "height" ) { - var val, props = { position: "absolute", visibility: "hidden", display:"block" }, which = name == "width" ? [ "Left", "Right" ] : [ "Top", "Bottom" ]; - - function getWH() { - val = name == "width" ? elem.offsetWidth : elem.offsetHeight; - - if ( extra === "border" ) - return; - - jQuery.each( which, function() { - if ( !extra ) - val -= parseFloat(jQuery.curCSS( elem, "padding" + this, true)) || 0; - if ( extra === "margin" ) - val += parseFloat(jQuery.curCSS( elem, "margin" + this, true)) || 0; - else - val -= parseFloat(jQuery.curCSS( elem, "border" + this + "Width", true)) || 0; - }); - } - - if ( elem.offsetWidth !== 0 ) - getWH(); - else - jQuery.swap( elem, props, getWH ); - - return Math.max(0, Math.round(val)); - } - - return jQuery.curCSS( elem, name, force ); - }, - - curCSS: function( elem, name, force ) { - var ret, style = elem.style; - - // We need to handle opacity special in IE - if ( name == "opacity" && !jQuery.support.opacity ) { - ret = jQuery.attr( style, "opacity" ); - - return ret == "" ? - "1" : - ret; - } - - // Make sure we're using the right name for getting the float value - if ( name.match( /float/i ) ) - name = styleFloat; - - if ( !force && style && style[ name ] ) - ret = style[ name ]; - - else if ( defaultView.getComputedStyle ) { - - // Only "float" is needed here - if ( name.match( /float/i ) ) - name = "float"; - - name = name.replace( /([A-Z])/g, "-$1" ).toLowerCase(); - - var computedStyle = defaultView.getComputedStyle( elem, null ); - - if ( computedStyle ) - ret = computedStyle.getPropertyValue( name ); - - // We should always get a number back from opacity - if ( name == "opacity" && ret == "" ) - ret = "1"; - - } else if ( elem.currentStyle ) { - var camelCase = name.replace(/\-(\w)/g, function(all, letter){ - return letter.toUpperCase(); - }); - - ret = elem.currentStyle[ name ] || elem.currentStyle[ camelCase ]; - - // From the awesome hack by Dean Edwards - // http://erik.eae.net/archives/2007/07/27/18.54.15/#comment-102291 - - // If we're not dealing with a regular pixel number - // but a number that has a weird ending, we need to convert it to pixels - if ( !/^\d+(px)?$/i.test( ret ) && /^\d/.test( ret ) ) { - // Remember the original values - var left = style.left, rsLeft = elem.runtimeStyle.left; - - // Put in the new values to get a computed value out - elem.runtimeStyle.left = elem.currentStyle.left; - style.left = ret || 0; - ret = style.pixelLeft + "px"; - - // Revert the changed values - style.left = left; - elem.runtimeStyle.left = rsLeft; - } - } - - return ret; - }, - - clean: function( elems, context, fragment ) { - context = context || document; - - // !context.createElement fails in IE with an error but returns typeof 'object' - if ( typeof context.createElement === "undefined" ) - context = context.ownerDocument || context[0] && context[0].ownerDocument || document; - - // If a single string is passed in and it's a single tag - // just do a createElement and skip the rest - if ( !fragment && elems.length === 1 && typeof elems[0] === "string" ) { - var match = /^<(\w+)\s*\/?>$/.exec(elems[0]); - if ( match ) - return [ context.createElement( match[1] ) ]; - } - - var ret = [], scripts = [], div = context.createElement("div"); - - jQuery.each(elems, function(i, elem){ - if ( typeof elem === "number" ) - elem += ''; - - if ( !elem ) - return; - - // Convert html string into DOM nodes - if ( typeof elem === "string" ) { - // Fix "XHTML"-style tags in all browsers - elem = elem.replace(/(<(\w+)[^>]*?)\/>/g, function(all, front, tag){ - return tag.match(/^(abbr|br|col|img|input|link|meta|param|hr|area|embed)$/i) ? - all : - front + "></" + tag + ">"; - }); - - // Trim whitespace, otherwise indexOf won't work as expected - var tags = elem.replace(/^\s+/, "").substring(0, 10).toLowerCase(); - - var wrap = - // option or optgroup - !tags.indexOf("<opt") && - [ 1, "<select multiple='multiple'>", "</select>" ] || - - !tags.indexOf("<leg") && - [ 1, "<fieldset>", "</fieldset>" ] || - - tags.match(/^<(thead|tbody|tfoot|colg|cap)/) && - [ 1, "<table>", "</table>" ] || - - !tags.indexOf("<tr") && - [ 2, "<table><tbody>", "</tbody></table>" ] || - - // <thead> matched above - (!tags.indexOf("<td") || !tags.indexOf("<th")) && - [ 3, "<table><tbody><tr>", "</tr></tbody></table>" ] || - - !tags.indexOf("<col") && - [ 2, "<table><tbody></tbody><colgroup>", "</colgroup></table>" ] || - - // IE can't serialize <link> and <script> tags normally - !jQuery.support.htmlSerialize && - [ 1, "div<div>", "</div>" ] || - - [ 0, "", "" ]; - - // Go to html and back, then peel off extra wrappers - div.innerHTML = wrap[1] + elem + wrap[2]; - - // Move to the right depth - while ( wrap[0]-- ) - div = div.lastChild; - - // Remove IE's autoinserted <tbody> from table fragments - if ( !jQuery.support.tbody ) { - - // String was a <table>, *may* have spurious <tbody> - var hasBody = /<tbody/i.test(elem), - tbody = !tags.indexOf("<table") && !hasBody ? 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context.getElementsByTagName("*"); - } - - return {set: set, expr: expr}; -}; - -Sizzle.filter = function(expr, set, inplace, not){ - var old = expr, result = [], curLoop = set, match, anyFound, - isXMLFilter = set && set[0] && isXML(set[0]); - - while ( expr && set.length ) { - for ( var type in Expr.filter ) { - if ( (match = Expr.match[ type ].exec( expr )) != null ) { - var filter = Expr.filter[ type ], found, item; - anyFound = false; - - if ( curLoop == result ) { - result = []; - } - - if ( Expr.preFilter[ type ] ) { - match = Expr.preFilter[ type ]( match, curLoop, inplace, result, not, isXMLFilter ); - - if ( !match ) { - anyFound = found = true; - } else if ( match === true ) { - continue; - } - } - - if ( match ) { - for ( var i = 0; (item = curLoop[i]) != null; i++ ) { - if ( item ) { - found = filter( item, match, i, curLoop ); - var pass = not ^ !!found; - - if ( inplace && found != null ) { - if ( pass ) { - anyFound = true; - } else { - curLoop[i] = false; - } - } else if ( pass ) { - result.push( item ); - anyFound = true; - } - } - } - } - - if ( found !== undefined ) { - if ( !inplace ) { - curLoop = result; - } - - expr = expr.replace( Expr.match[ type ], "" ); - - if ( !anyFound ) { - return []; - } - - break; - } - } - } - - // Improper expression - if ( expr == old ) { - if ( anyFound == null ) { - throw "Syntax error, unrecognized expression: " + expr; - } else { - break; - } - } - - old = expr; - } - - return curLoop; -}; - -var Expr = Sizzle.selectors = { - order: [ "ID", "NAME", "TAG" ], - match: { - ID: /#((?:[\w\u00c0-\uFFFF_-]|\\.)+)/, - CLASS: /\.((?:[\w\u00c0-\uFFFF_-]|\\.)+)/, - NAME: /\[name=['"]*((?:[\w\u00c0-\uFFFF_-]|\\.)+)['"]*\]/, - ATTR: /\[\s*((?:[\w\u00c0-\uFFFF_-]|\\.)+)\s*(?:(\S?=)\s*(['"]*)(.*?)\3|)\s*\]/, - TAG: /^((?:[\w\u00c0-\uFFFF\*_-]|\\.)+)/, - CHILD: /:(only|nth|last|first)-child(?:$(even|odd|[\dn+-]*)$)?/, - POS: /:(nth|eq|gt|lt|first|last|even|odd)(?:$(\d*)$)?(?=[^-]|$)/, - PSEUDO: /:((?:[\w\u00c0-\uFFFF_-]|\\.)+)(?:$(['"]*)((?:\([^$]+\)|[^\2]*)+)\2\))?/ - }, - attrMap: { - "class": "className", - "for": "htmlFor" - }, - attrHandle: { - href: function(elem){ - return elem.getAttribute("href"); - } - }, - relative: { - "+": function(checkSet, part, isXML){ - var isPartStr = typeof part === "string", - isTag = isPartStr && !/\W/.test(part), - isPartStrNotTag = isPartStr && !isTag; - - if ( isTag && !isXML ) { - part = part.toUpperCase(); - } - - for ( var i = 0, l = checkSet.length, elem; i < l; i++ ) { - if ( (elem = checkSet[i]) ) { - while ( (elem = elem.previousSibling) && elem.nodeType !== 1 ) {} - - checkSet[i] = isPartStrNotTag || elem && elem.nodeName === part ? - elem || false : - elem === part; - } - } - - if ( isPartStrNotTag ) { - Sizzle.filter( part, checkSet, true ); - } - }, - ">": function(checkSet, part, isXML){ - var isPartStr = typeof part === "string"; - - if ( isPartStr && !/\W/.test(part) ) { - part = isXML ? part : part.toUpperCase(); - - for ( var i = 0, l = checkSet.length; i < l; i++ ) { - var elem = checkSet[i]; - if ( elem ) { - var parent = elem.parentNode; - checkSet[i] = parent.nodeName === part ? parent : false; - } - } - } else { - for ( var i = 0, l = checkSet.length; i < l; i++ ) { - var elem = checkSet[i]; - if ( elem ) { - checkSet[i] = isPartStr ? - elem.parentNode : - elem.parentNode === part; - } - } - - if ( isPartStr ) { - Sizzle.filter( part, checkSet, true ); - } - } - }, - "": function(checkSet, part, isXML){ - var doneName = done++, checkFn = dirCheck; - - if ( !part.match(/\W/) ) { - var nodeCheck = part = isXML ? part : part.toUpperCase(); - checkFn = dirNodeCheck; - } - - checkFn("parentNode", part, doneName, checkSet, nodeCheck, isXML); - }, - "~": function(checkSet, part, isXML){ - var doneName = done++, checkFn = dirCheck; - - if ( typeof part === "string" && !part.match(/\W/) ) { - var nodeCheck = part = isXML ? part : part.toUpperCase(); - checkFn = dirNodeCheck; - } - - checkFn("previousSibling", part, doneName, checkSet, nodeCheck, isXML); - } - }, - find: { - ID: function(match, context, isXML){ - if ( typeof context.getElementById !== "undefined" && !isXML ) { - var m = context.getElementById(match[1]); - return m ? [m] : []; - } - }, - NAME: function(match, context, isXML){ - if ( typeof context.getElementsByName !== "undefined" ) { - var ret = [], results = context.getElementsByName(match[1]); - - for ( var i = 0, l = results.length; i < l; i++ ) { - if ( results[i].getAttribute("name") === match[1] ) { - ret.push( results[i] ); - } - } - - return ret.length === 0 ? null : ret; - } - }, - TAG: function(match, context){ - return context.getElementsByTagName(match[1]); - } - }, - preFilter: { - CLASS: function(match, curLoop, inplace, result, not, isXML){ - match = " " + match[1].replace(/\\/g, "") + " "; - - if ( isXML ) { - return match; - } - - for ( var i = 0, elem; (elem = curLoop[i]) != null; i++ ) { - if ( elem ) { - if ( not ^ (elem.className && (" " + elem.className + " ").indexOf(match) >= 0) ) { - if ( !inplace ) - result.push( elem ); - } else if ( inplace ) { - curLoop[i] = false; - } - } - } - - return false; - }, - ID: function(match){ - return match[1].replace(/\\/g, ""); - }, - TAG: function(match, curLoop){ - for ( var i = 0; curLoop[i] === false; i++ ){} - return curLoop[i] && isXML(curLoop[i]) ? match[1] : match[1].toUpperCase(); - }, - CHILD: function(match){ - if ( match[1] == "nth" ) { - // parse equations like 'even', 'odd', '5', '2n', '3n+2', '4n-1', '-n+6' - var test = /(-?)(\d*)n((?:\+|-)?\d*)/.exec( - match[2] == "even" && "2n" || match[2] == "odd" && "2n+1" || - !/\D/.test( match[2] ) && "0n+" + match[2] || match[2]); - - // calculate the numbers (first)n+(last) including if they are negative - match[2] = (test[1] + (test[2] || 1)) - 0; - match[3] = test[3] - 0; - } - - // TODO: Move to normal caching system - match[0] = done++; - - return match; - }, - ATTR: function(match, curLoop, inplace, result, not, isXML){ - var name = match[1].replace(/\\/g, ""); - - if ( !isXML && Expr.attrMap[name] ) { - match[1] = Expr.attrMap[name]; - } - - if ( match[2] === "~=" ) { - match[4] = " " + match[4] + " "; - } - - return match; - }, - PSEUDO: function(match, curLoop, inplace, result, not){ - if ( match[1] === "not" ) { - // If we're dealing with a complex expression, or a simple one - if ( match[3].match(chunker).length > 1 || /^\w/.test(match[3]) ) { - match[3] = Sizzle(match[3], null, null, curLoop); - } else { - var ret = Sizzle.filter(match[3], curLoop, inplace, true ^ not); - if ( !inplace ) { - result.push.apply( result, ret ); - } - return false; - } - } else if ( Expr.match.POS.test( match[0] ) || Expr.match.CHILD.test( match[0] ) ) { - return true; - } - - return match; - }, - POS: function(match){ - match.unshift( true ); - return match; - } - }, - filters: { - enabled: function(elem){ - return elem.disabled === false && elem.type !== "hidden"; - }, - disabled: function(elem){ - return elem.disabled === true; - }, - checked: function(elem){ - return elem.checked === true; - }, - selected: function(elem){ - // Accessing this property makes selected-by-default - // options in Safari work properly - elem.parentNode.selectedIndex; - return elem.selected === true; - }, - parent: function(elem){ - return !!elem.firstChild; - }, - empty: function(elem){ - return !elem.firstChild; - }, - has: function(elem, i, match){ - return !!Sizzle( match[3], elem ).length; - }, - header: function(elem){ - return /h\d/i.test( elem.nodeName ); - }, - text: function(elem){ - return "text" === elem.type; - }, - radio: function(elem){ - return "radio" === elem.type; - }, - checkbox: function(elem){ - return "checkbox" === elem.type; - }, - file: function(elem){ - return "file" === elem.type; - }, - password: function(elem){ - return "password" === elem.type; - }, - submit: function(elem){ - return "submit" === elem.type; - }, - image: function(elem){ - return "image" === elem.type; - }, - reset: function(elem){ - return "reset" === elem.type; - }, - button: function(elem){ - return "button" === elem.type || elem.nodeName.toUpperCase() === "BUTTON"; - }, - input: function(elem){ - return /input|select|textarea|button/i.test(elem.nodeName); - } - }, - setFilters: { - first: function(elem, i){ - return i === 0; - }, - last: function(elem, i, match, array){ - return i === array.length - 1; - }, - even: function(elem, i){ - return i % 2 === 0; - }, - odd: function(elem, i){ - return i % 2 === 1; - }, - lt: function(elem, i, match){ - return i < match[3] - 0; - }, - gt: function(elem, i, match){ - return i > match[3] - 0; - }, - nth: function(elem, i, match){ - return match[3] - 0 == i; - }, - eq: function(elem, i, match){ - return match[3] - 0 == i; - } - }, - filter: { - PSEUDO: function(elem, match, i, array){ - var name = match[1], filter = Expr.filters[ name ]; - - if ( filter ) { - return filter( elem, i, match, array ); - } else if ( name === "contains" ) { - return (elem.textContent || elem.innerText || "").indexOf(match[3]) >= 0; - } else if ( name === "not" ) { - var not = match[3]; - - for ( var i = 0, l = not.length; i < l; i++ ) { - if ( not[i] === elem ) { - return false; - } - } - - return true; - } - }, - CHILD: function(elem, match){ - var type = match[1], node = elem; - switch (type) { - case 'only': - case 'first': - while (node = node.previousSibling) { - if ( node.nodeType === 1 ) return false; - } - if ( type == 'first') return true; - node = elem; - case 'last': - while (node = node.nextSibling) { - if ( node.nodeType === 1 ) return false; - } - return true; - case 'nth': - var first = match[2], last = match[3]; - - if ( first == 1 && last == 0 ) { - return true; - } - - var doneName = match[0], - parent = elem.parentNode; - - if ( parent && (parent.sizcache !== doneName || !elem.nodeIndex) ) { - var count = 0; - for ( node = parent.firstChild; node; node = node.nextSibling ) { - if ( node.nodeType === 1 ) { - node.nodeIndex = ++count; - } - } - parent.sizcache = doneName; - } - - var diff = elem.nodeIndex - last; - if ( first == 0 ) { - return diff == 0; - } else { - return ( diff % first == 0 && diff / first >= 0 ); - } - } - }, - ID: function(elem, match){ - return elem.nodeType === 1 && elem.getAttribute("id") === match; - }, - TAG: function(elem, match){ - return (match === "*" && elem.nodeType === 1) || elem.nodeName === match; - }, - CLASS: function(elem, match){ - return (" " + (elem.className || elem.getAttribute("class")) + " ") - .indexOf( match ) > -1; - }, - ATTR: function(elem, match){ - var name = match[1], - result = Expr.attrHandle[ name ] ? - Expr.attrHandle[ name ]( elem ) : - elem[ name ] != null ? - elem[ name ] : - elem.getAttribute( name ), - value = result + "", - type = match[2], - check = match[4]; - - return result == null ? - type === "!=" : - type === "=" ? - value === check : - type === "*=" ? - value.indexOf(check) >= 0 : - type === "~=" ? - (" " + value + " ").indexOf(check) >= 0 : - !check ? - value && result !== false : - type === "!=" ? - value != check : - type === "^=" ? - value.indexOf(check) === 0 : - type === "$=" ? - value.substr(value.length - check.length) === check : - type === "|=" ? - value === check || value.substr(0, check.length + 1) === check + "-" : - false; - }, - POS: function(elem, match, i, array){ - var name = match[2], filter = Expr.setFilters[ name ]; - - if ( filter ) { - return filter( elem, i, match, array ); - } - } - } -}; - -var origPOS = Expr.match.POS; - -for ( var type in Expr.match ) { - Expr.match[ type ] = RegExp( Expr.match[ type ].source + /(?![^\[]*\])(?![^$]*$)/.source ); -} - -var makeArray = function(array, results) { - array = Array.prototype.slice.call( array ); - - if ( results ) { - results.push.apply( results, array ); - return results; - } - - return array; -}; - -// Perform a simple check to determine if the browser is capable of -// converting a NodeList to an array using builtin methods. -try { - Array.prototype.slice.call( document.documentElement.childNodes ); - -// Provide a fallback method if it does not work -} catch(e){ - makeArray = function(array, results) { - var ret = results || []; - - if ( toString.call(array) === "[object Array]" ) { - Array.prototype.push.apply( ret, array ); - } else { - if ( typeof array.length === "number" ) { - for ( var i = 0, l = array.length; i < l; i++ ) { - ret.push( array[i] ); - } - } else { - for ( var i = 0; array[i]; i++ ) { - ret.push( array[i] ); - } - } - } - - return ret; - }; -} - -var sortOrder; - -if ( document.documentElement.compareDocumentPosition ) { - sortOrder = function( a, b ) { - var ret = a.compareDocumentPosition(b) & 4 ? -1 : a === b ? 0 : 1; - if ( ret === 0 ) { - hasDuplicate = true; - } - return ret; - }; -} else if ( "sourceIndex" in document.documentElement ) { - sortOrder = function( a, b ) { - var ret = a.sourceIndex - b.sourceIndex; - if ( ret === 0 ) { - hasDuplicate = true; - } - return ret; - }; -} else if ( document.createRange ) { - sortOrder = function( a, b ) { - var aRange = a.ownerDocument.createRange(), bRange = b.ownerDocument.createRange(); - aRange.selectNode(a); - aRange.collapse(true); - bRange.selectNode(b); - bRange.collapse(true); - var ret = aRange.compareBoundaryPoints(Range.START_TO_END, bRange); - if ( ret === 0 ) { - hasDuplicate = true; - } - return ret; - }; -} - -// Check to see if the browser returns elements by name when -// querying by getElementById (and provide a workaround) -(function(){ - // We're going to inject a fake input element with a specified name - var form = document.createElement("form"), - id = "script" + (new Date).getTime(); - form.innerHTML = "<input name='" + id + "'/>"; - - // Inject it into the root element, check its status, and remove it quickly - var root = document.documentElement; - root.insertBefore( form, root.firstChild ); - - // The workaround has to do additional checks after a getElementById - // Which slows things down for other browsers (hence the branching) - if ( !!document.getElementById( id ) ) { - Expr.find.ID = function(match, context, isXML){ - if ( typeof context.getElementById !== "undefined" && !isXML ) { - var m = context.getElementById(match[1]); - return m ? m.id === match[1] || typeof m.getAttributeNode !== "undefined" && m.getAttributeNode("id").nodeValue === match[1] ? [m] : undefined : []; - } - }; - - Expr.filter.ID = function(elem, match){ - var node = typeof elem.getAttributeNode !== "undefined" && elem.getAttributeNode("id"); - return elem.nodeType === 1 && node && node.nodeValue === match; - }; - } - - root.removeChild( form ); -})(); - -(function(){ - // Check to see if the browser returns only elements - // when doing getElementsByTagName("*") - - // Create a fake element - var div = document.createElement("div"); - div.appendChild( document.createComment("") ); - - // Make sure no comments are found - if ( div.getElementsByTagName("*").length > 0 ) { - Expr.find.TAG = function(match, context){ - var results = context.getElementsByTagName(match[1]); - - // Filter out possible comments - if ( match[1] === "*" ) { - var tmp = []; - - for ( var i = 0; results[i]; i++ ) { - if ( results[i].nodeType === 1 ) { - tmp.push( results[i] ); - } - } - - results = tmp; - } - - return results; - }; - } - - // Check to see if an attribute returns normalized href attributes - div.innerHTML = "<a href='#'></a>"; - if ( div.firstChild && typeof div.firstChild.getAttribute !== "undefined" && - div.firstChild.getAttribute("href") !== "#" ) { - Expr.attrHandle.href = function(elem){ - return elem.getAttribute("href", 2); - }; - } -})(); - -if ( document.querySelectorAll ) (function(){ - var oldSizzle = Sizzle, div = document.createElement("div"); - div.innerHTML = "<p class='TEST'></p>"; - - // Safari can't handle uppercase or unicode characters when - // in quirks mode. - if ( div.querySelectorAll && div.querySelectorAll(".TEST").length === 0 ) { - return; - } - - Sizzle = function(query, context, extra, seed){ - context = context || document; - - // Only use querySelectorAll on non-XML documents - // (ID selectors don't work in non-HTML documents) - if ( !seed && context.nodeType === 9 && !isXML(context) ) { - try { - return makeArray( context.querySelectorAll(query), extra ); - } catch(e){} - } - - return oldSizzle(query, context, extra, seed); - }; - - Sizzle.find = oldSizzle.find; - Sizzle.filter = oldSizzle.filter; - Sizzle.selectors = oldSizzle.selectors; - Sizzle.matches = oldSizzle.matches; -})(); - -if ( document.getElementsByClassName && document.documentElement.getElementsByClassName ) (function(){ - var div = document.createElement("div"); - div.innerHTML = "<div class='test e'></div><div class='test'></div>"; - - // Opera can't find a second classname (in 9.6) - if ( div.getElementsByClassName("e").length === 0 ) - return; - - // Safari caches class attributes, doesn't catch changes (in 3.2) - div.lastChild.className = "e"; - - if ( div.getElementsByClassName("e").length === 1 ) - return; - - Expr.order.splice(1, 0, "CLASS"); - Expr.find.CLASS = function(match, context, isXML) { - if ( typeof context.getElementsByClassName !== "undefined" && !isXML ) { - return context.getElementsByClassName(match[1]); - } - }; -})(); - -function dirNodeCheck( dir, cur, doneName, checkSet, nodeCheck, isXML ) { - var sibDir = dir == "previousSibling" && !isXML; - for ( var i = 0, l = checkSet.length; i < l; i++ ) { - var elem = checkSet[i]; - if ( elem ) { - if ( sibDir && elem.nodeType === 1 ){ - elem.sizcache = doneName; - elem.sizset = i; - } - elem = elem[dir]; - var match = false; - - while ( elem ) { - if ( elem.sizcache === doneName ) { - match = checkSet[elem.sizset]; - break; - } - - if ( elem.nodeType === 1 && !isXML ){ - elem.sizcache = doneName; - elem.sizset = i; - } - - if ( elem.nodeName === cur ) { - match = elem; - break; - } - - elem = elem[dir]; - } - - checkSet[i] = match; - } - } -} - -function dirCheck( dir, cur, doneName, checkSet, nodeCheck, isXML ) { - var sibDir = dir == "previousSibling" && !isXML; - for ( var i = 0, l = checkSet.length; i < l; i++ ) { - var elem = checkSet[i]; - if ( elem ) { - if ( sibDir && elem.nodeType === 1 ) { - elem.sizcache = doneName; - elem.sizset = i; - } - elem = elem[dir]; - var match = false; - - while ( elem ) { - if ( elem.sizcache === doneName ) { - match = checkSet[elem.sizset]; - break; - } - - if ( elem.nodeType === 1 ) { - if ( !isXML ) { - elem.sizcache = doneName; - elem.sizset = i; - } - if ( typeof cur !== "string" ) { - if ( elem === cur ) { - match = true; - break; - } - - } else if ( Sizzle.filter( cur, [elem] ).length > 0 ) { - match = elem; - break; - } - } - - elem = elem[dir]; - } - - checkSet[i] = match; - } - } -} - -var contains = document.compareDocumentPosition ? function(a, b){ - return a.compareDocumentPosition(b) & 16; -} : function(a, b){ - return a !== b && (a.contains ? a.contains(b) : true); -}; - -var isXML = function(elem){ - return elem.nodeType === 9 && elem.documentElement.nodeName !== "HTML" || - !!elem.ownerDocument && isXML( elem.ownerDocument ); -}; - -var posProcess = function(selector, context){ - var tmpSet = [], later = "", match, - root = context.nodeType ? [context] : context; - - // Position selectors must be done after the filter - // And so must :not(positional) so we move all PSEUDOs to the end - while ( (match = Expr.match.PSEUDO.exec( selector )) ) { - later += match[0]; - selector = selector.replace( Expr.match.PSEUDO, "" ); - } - - selector = Expr.relative[selector] ? selector + "*" : selector; - - for ( var i = 0, l = root.length; i < l; i++ ) { - Sizzle( selector, root[i], tmpSet ); - } - - return Sizzle.filter( later, tmpSet ); -}; - -// EXPOSE -jQuery.find = Sizzle; -jQuery.filter = Sizzle.filter; -jQuery.expr = Sizzle.selectors; -jQuery.expr[":"] = jQuery.expr.filters; - -Sizzle.selectors.filters.hidden = function(elem){ - return elem.offsetWidth === 0 || elem.offsetHeight === 0; -}; - -Sizzle.selectors.filters.visible = function(elem){ - return elem.offsetWidth > 0 || elem.offsetHeight > 0; -}; - -Sizzle.selectors.filters.animated = function(elem){ - return jQuery.grep(jQuery.timers, function(fn){ - return elem === fn.elem; - }).length; -}; - -jQuery.multiFilter = function( expr, elems, not ) { - if ( not ) { - expr = ":not(" + expr + ")"; - } - - return Sizzle.matches(expr, elems); -}; - -jQuery.dir = function( elem, dir ){ - var matched = [], cur = elem[dir]; - while ( cur && cur != document ) { - if ( cur.nodeType == 1 ) - matched.push( cur ); - cur = cur[dir]; - } - return matched; -}; - -jQuery.nth = function(cur, result, dir, elem){ - result = result || 1; - var num = 0; - - for ( ; cur; cur = cur[dir] ) - if ( cur.nodeType == 1 && ++num == result ) - break; - - return cur; -}; - -jQuery.sibling = function(n, elem){ - var r = []; - - for ( ; n; n = n.nextSibling ) { - if ( n.nodeType == 1 && n != elem ) - r.push( n ); - } - - return r; -}; - -return; - -window.Sizzle = Sizzle; - -})(); -/* - * A number of helper functions used for managing events. - * Many of the ideas behind this code originated from - * Dean Edwards' addEvent library. - */ -jQuery.event = { - - // Bind an event to an element - // Original by Dean Edwards - add: function(elem, types, handler, data) { - if ( elem.nodeType == 3 || elem.nodeType == 8 ) - return; - - // For whatever reason, IE has trouble passing the window object - // around, causing it to be cloned in the process - if ( elem.setInterval && elem != window ) - elem = window; - - // Make sure that the function being executed has a unique ID - if ( !handler.guid ) - handler.guid = this.guid++; - - // if data is passed, bind to handler - if ( data !== undefined ) { - // Create temporary function pointer to original handler - var fn = handler; - - // Create unique handler function, wrapped around original handler - handler = this.proxy( fn ); - - // Store data in unique handler - handler.data = data; - } - - // Init the element's event structure - var events = jQuery.data(elem, "events") || jQuery.data(elem, "events", {}), - handle = jQuery.data(elem, "handle") || jQuery.data(elem, "handle", function(){ - // Handle the second event of a trigger and when - // an event is called after a page has unloaded - return typeof jQuery !== "undefined" && !jQuery.event.triggered ? - jQuery.event.handle.apply(arguments.callee.elem, arguments) : - undefined; - }); - // Add elem as a property of the handle function - // This is to prevent a memory leak with non-native - // event in IE. - handle.elem = elem; - - // Handle multiple events separated by a space - // jQuery(...).bind("mouseover mouseout", fn); - jQuery.each(types.split(/\s+/), function(index, type) { - // Namespaced event handlers - var namespaces = type.split("."); - type = namespaces.shift(); - handler.type = namespaces.slice().sort().join("."); - - // Get the current list of functions bound to this event - var handlers = events[type]; - - if ( jQuery.event.specialAll[type] ) - jQuery.event.specialAll[type].setup.call(elem, data, namespaces); - - // Init the event handler queue - if (!handlers) { - handlers = events[type] = {}; - - // Check for a special event handler - // Only use addEventListener/attachEvent if the special - // events handler returns false - if ( !jQuery.event.special[type] || jQuery.event.special[type].setup.call(elem, data, namespaces) === false ) { - // Bind the global event handler to the element - if (elem.addEventListener) - elem.addEventListener(type, handle, false); - else if (elem.attachEvent) - elem.attachEvent("on" + type, handle); - } - } - - // Add the function to the element's handler list - handlers[handler.guid] = handler; - - // Keep track of which events have been used, for global triggering - jQuery.event.global[type] = true; - }); - - // Nullify elem to prevent memory leaks in IE - elem = null; - }, - - guid: 1, - global: {}, - - // Detach an event or set of events from an element - remove: function(elem, types, handler) { - // don't do events on text and comment nodes - if ( elem.nodeType == 3 || elem.nodeType == 8 ) - return; - - var events = jQuery.data(elem, "events"), ret, index; - - if ( events ) { - // Unbind all events for the element - if ( types === undefined || (typeof types === "string" && types.charAt(0) == ".") ) - for ( var type in events ) - this.remove( elem, type + (types || "") ); - else { - // types is actually an event object here - if ( types.type ) { - handler = types.handler; - types = types.type; - } - - // Handle multiple events seperated by a space - // jQuery(...).unbind("mouseover mouseout", fn); - jQuery.each(types.split(/\s+/), function(index, type){ - // Namespaced event handlers - var namespaces = type.split("."); - type = namespaces.shift(); - var namespace = RegExp("(^|\\.)" + namespaces.slice().sort().join(".*\\.") + "(\\.|$)"); - - if ( events[type] ) { - // remove the given handler for the given type - if ( handler ) - delete events[type][handler.guid]; - - // remove all handlers for the given type - else - for ( var handle in events[type] ) - // Handle the removal of namespaced events - if ( namespace.test(events[type][handle].type) ) - delete events[type][handle]; - - if ( jQuery.event.specialAll[type] ) - jQuery.event.specialAll[type].teardown.call(elem, namespaces); - - // remove generic event handler if no more handlers exist - for ( ret in events[type] ) break; - if ( !ret ) { - if ( !jQuery.event.special[type] || jQuery.event.special[type].teardown.call(elem, namespaces) === false ) { - if (elem.removeEventListener) - elem.removeEventListener(type, jQuery.data(elem, "handle"), false); - else if (elem.detachEvent) - elem.detachEvent("on" + type, jQuery.data(elem, "handle")); - } - ret = null; - delete events[type]; - } - } - }); - } - - // Remove the expando if it's no longer used - for ( ret in events ) break; - if ( !ret ) { - var handle = jQuery.data( elem, "handle" ); - if ( handle ) handle.elem = null; - jQuery.removeData( elem, "events" ); - jQuery.removeData( elem, "handle" ); - } - } - }, - - // bubbling is internal - trigger: function( event, data, elem, bubbling ) { - // Event object or event type - var type = event.type || event; - - if( !bubbling ){ - event = typeof event === "object" ? - // jQuery.Event object - event[expando] ? event : - // Object literal - jQuery.extend( jQuery.Event(type), event ) : - // Just the event type (string) - jQuery.Event(type); - - if ( type.indexOf("!") >= 0 ) { - event.type = type = type.slice(0, -1); - event.exclusive = true; - } - - // Handle a global trigger - if ( !elem ) { - // Don't bubble custom events when global (to avoid too much overhead) - event.stopPropagation(); - // Only trigger if we've ever bound an event for it - if ( this.global[type] ) - jQuery.each( jQuery.cache, function(){ - if ( this.events && this.events[type] ) - jQuery.event.trigger( event, data, this.handle.elem ); - }); - } - - // Handle triggering a single element - - // don't do events on text and comment nodes - if ( !elem || elem.nodeType == 3 || elem.nodeType == 8 ) - return undefined; - - // Clean up in case it is reused - event.result = undefined; - event.target = elem; - - // Clone the incoming data, if any - data = jQuery.makeArray(data); - data.unshift( event ); - } - - event.currentTarget = elem; - - // Trigger the event, it is assumed that "handle" is a function - var handle = jQuery.data(elem, "handle"); - if ( handle ) - handle.apply( elem, data ); - - // Handle triggering native .onfoo handlers (and on links since we don't call .click() for links) - if ( (!elem[type] || (jQuery.nodeName(elem, 'a') && type == "click")) && elem["on"+type] && elem["on"+type].apply( elem, data ) === false ) - event.result = false; - - // Trigger the native events (except for clicks on links) - if ( !bubbling && elem[type] && !event.isDefaultPrevented() && !(jQuery.nodeName(elem, 'a') && type == "click") ) { - this.triggered = true; - try { - elem[ type ](); - // prevent IE from throwing an error for some hidden elements - } catch (e) {} - } - - this.triggered = false; - - if ( !event.isPropagationStopped() ) { - var parent = elem.parentNode || elem.ownerDocument; - if ( parent ) - jQuery.event.trigger(event, data, parent, true); - } - }, - - handle: function(event) { - // returned undefined or false - var all, handlers; - - event = arguments[0] = jQuery.event.fix( event || window.event ); - event.currentTarget = this; - - // Namespaced event handlers - var namespaces = event.type.split("."); - event.type = namespaces.shift(); - - // Cache this now, all = true means, any handler - all = !namespaces.length && !event.exclusive; - - var namespace = RegExp("(^|\\.)" + namespaces.slice().sort().join(".*\\.") + "(\\.|$)"); - - handlers = ( jQuery.data(this, "events") || {} )[event.type]; - - for ( var j in handlers ) { - var handler = handlers[j]; - - // Filter the functions by class - if ( all || namespace.test(handler.type) ) { - // Pass in a reference to the handler function itself - // So that we can later remove it - event.handler = handler; - event.data = handler.data; - - var ret = handler.apply(this, arguments); - - if( ret !== undefined ){ - event.result = ret; - if ( ret === false ) { - event.preventDefault(); - event.stopPropagation(); - } - } - - if( event.isImmediatePropagationStopped() ) - break; - - } - } - }, - - props: "altKey attrChange attrName bubbles button cancelable charCode clientX clientY ctrlKey currentTarget data detail eventPhase fromElement handler keyCode metaKey newValue originalTarget pageX pageY prevValue relatedNode relatedTarget screenX screenY shiftKey srcElement target toElement view wheelDelta which".split(" "), - - fix: function(event) { - if ( event[expando] ) - return event; - - // store a copy of the original event object - // and "clone" to set read-only properties - var originalEvent = event; - event = jQuery.Event( originalEvent ); - - for ( var i = this.props.length, prop; i; ){ - prop = this.props[ --i ]; - event[ prop ] = originalEvent[ prop ]; - } - - // Fix target property, if necessary - if ( !event.target ) - event.target = event.srcElement || document; // Fixes #1925 where srcElement might not be defined either - - // check if target is a textnode (safari) - if ( event.target.nodeType == 3 ) - event.target = event.target.parentNode; - - // Add relatedTarget, if necessary - if ( !event.relatedTarget && event.fromElement ) - event.relatedTarget = event.fromElement == event.target ? event.toElement : event.fromElement; - - // Calculate pageX/Y if missing and clientX/Y available - if ( event.pageX == null && event.clientX != null ) { - var doc = document.documentElement, body = document.body; - event.pageX = event.clientX + (doc && doc.scrollLeft || body && body.scrollLeft || 0) - (doc.clientLeft || 0); - event.pageY = event.clientY + (doc && doc.scrollTop || body && body.scrollTop || 0) - (doc.clientTop || 0); - } - - // Add which for key events - if ( !event.which && ((event.charCode || event.charCode === 0) ? event.charCode : event.keyCode) ) - event.which = event.charCode || event.keyCode; - - // Add metaKey to non-Mac browsers (use ctrl for PC's and Meta for Macs) - if ( !event.metaKey && event.ctrlKey ) - event.metaKey = event.ctrlKey; - - // Add which for click: 1 == left; 2 == middle; 3 == right - // Note: button is not normalized, so don't use it - if ( !event.which && event.button ) - event.which = (event.button & 1 ? 1 : ( event.button & 2 ? 3 : ( event.button & 4 ? 2 : 0 ) )); - - return event; - }, - - proxy: function( fn, proxy ){ - proxy = proxy || function(){ return fn.apply(this, arguments); }; - // Set the guid of unique handler to the same of original handler, so it can be removed - proxy.guid = fn.guid = fn.guid || proxy.guid || this.guid++; - // So proxy can be declared as an argument - return proxy; - }, - - special: { - ready: { - // Make sure the ready event is setup - setup: bindReady, - teardown: function() {} - } - }, - - specialAll: { - live: { - setup: function( selector, namespaces ){ - jQuery.event.add( this, namespaces[0], liveHandler ); - }, - teardown: function( namespaces ){ - if ( namespaces.length ) { - var remove = 0, name = RegExp("(^|\\.)" + namespaces[0] + "(\\.|$)"); - - jQuery.each( (jQuery.data(this, "events").live || {}), function(){ - if ( name.test(this.type) ) - remove++; - }); - - if ( remove < 1 ) - jQuery.event.remove( this, namespaces[0], liveHandler ); - } - } - } - } -}; - -jQuery.Event = function( src ){ - // Allow instantiation without the 'new' keyword - if( !this.preventDefault ) - return new jQuery.Event(src); - - // Event object - if( src && src.type ){ - this.originalEvent = src; - this.type = src.type; - // Event type - }else - this.type = src; - - // timeStamp is buggy for some events on Firefox(#3843) - // So we won't rely on the native value - this.timeStamp = now(); - - // Mark it as fixed - this[expando] = true; -}; - -function returnFalse(){ - return false; -} -function returnTrue(){ - return true; -} - -// jQuery.Event is based on DOM3 Events as specified by the ECMAScript Language Binding -// http://www.w3.org/TR/2003/WD-DOM-Level-3-Events-20030331/ecma-script-bindin… -jQuery.Event.prototype = { - preventDefault: function() { - this.isDefaultPrevented = returnTrue; - - var e = this.originalEvent; - if( !e ) - return; - // if preventDefault exists run it on the original event - if (e.preventDefault) - e.preventDefault(); - // otherwise set the returnValue property of the original event to false (IE) - e.returnValue = false; - }, - stopPropagation: function() { - this.isPropagationStopped = returnTrue; - - var e = this.originalEvent; - if( !e ) - return; - // if stopPropagation exists run it on the original event - if (e.stopPropagation) - e.stopPropagation(); - // otherwise set the cancelBubble property of the original event to true (IE) - e.cancelBubble = true; - }, - stopImmediatePropagation:function(){ - this.isImmediatePropagationStopped = returnTrue; - this.stopPropagation(); - }, - isDefaultPrevented: returnFalse, - isPropagationStopped: returnFalse, - isImmediatePropagationStopped: returnFalse -}; -// Checks if an event happened on an element within another element -// Used in jQuery.event.special.mouseenter and mouseleave handlers -var withinElement = function(event) { - // Check if mouse(over|out) are still within the same parent element - var parent = event.relatedTarget; - // Traverse up the tree - while ( parent && parent != this ) - try { parent = parent.parentNode; } - catch(e) { parent = this; } - - if( parent != this ){ - // set the correct event type - event.type = event.data; - // handle event if we actually just moused on to a non sub-element - jQuery.event.handle.apply( this, arguments ); - } -}; - -jQuery.each({ - mouseover: 'mouseenter', - mouseout: 'mouseleave' -}, function( orig, fix ){ - jQuery.event.special[ fix ] = { - setup: function(){ - jQuery.event.add( this, orig, withinElement, fix ); - }, - teardown: function(){ - jQuery.event.remove( this, orig, withinElement ); - } - }; -}); - -jQuery.fn.extend({ - bind: function( type, data, fn ) { - return type == "unload" ? this.one(type, data, fn) : this.each(function(){ - jQuery.event.add( this, type, fn || data, fn && data ); - }); - }, - - one: function( type, data, fn ) { - var one = jQuery.event.proxy( fn || data, function(event) { - jQuery(this).unbind(event, one); - return (fn || data).apply( this, arguments ); - }); - return this.each(function(){ - jQuery.event.add( this, type, one, fn && data); - }); - }, - - unbind: function( type, fn ) { - return this.each(function(){ - jQuery.event.remove( this, type, fn ); - }); - }, - - trigger: function( type, data ) { - return this.each(function(){ - jQuery.event.trigger( type, data, this ); - }); - }, - - triggerHandler: function( type, data ) { - if( this[0] ){ - var event = jQuery.Event(type); - event.preventDefault(); - event.stopPropagation(); - jQuery.event.trigger( event, data, this[0] ); - return event.result; - } - }, - - toggle: function( fn ) { - // Save reference to arguments for access in closure - var args = arguments, i = 1; - - // link all the functions, so any of them can unbind this click handler - while( i < args.length ) - jQuery.event.proxy( fn, args[i++] ); - - return this.click( jQuery.event.proxy( fn, function(event) { - // Figure out which function to execute - this.lastToggle = ( this.lastToggle || 0 ) % i; - - // Make sure that clicks stop - event.preventDefault(); - - // and execute the function - return args[ this.lastToggle++ ].apply( this, arguments ) || false; - })); - }, - - hover: function(fnOver, fnOut) { - return this.mouseenter(fnOver).mouseleave(fnOut); - }, - - ready: function(fn) { - // Attach the listeners - bindReady(); - - // If the DOM is already ready - if ( jQuery.isReady ) - // Execute the function immediately - fn.call( document, jQuery ); - - // Otherwise, remember the function for later - else - // Add the function to the wait list - jQuery.readyList.push( fn ); - - return this; - }, - - live: function( type, fn ){ - var proxy = jQuery.event.proxy( fn ); - proxy.guid += this.selector + type; - - jQuery(document).bind( liveConvert(type, this.selector), this.selector, proxy ); - - return this; - }, - - die: function( type, fn ){ - jQuery(document).unbind( liveConvert(type, this.selector), fn ? { guid: fn.guid + this.selector + type } : null );

1 0

[hg] galaxy 3406: Add the bx browser as a display app for builds...
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/297d8c9c5eb0 changeset: 3406:297d8c9c5eb0 user: Greg Von Kuster <greg(a)bx.psu.edu> date: Wed Feb 17 12:45:32 2010 -0500 description: Add the bx browser as a display app for builds hg18,hg19.mm8.mm9, and add the bx browser to the tool config for main. diffstat: lib/galaxy/config.py | 1 + lib/galaxy/datatypes/interval.py | 24 ++++++++++++++++++++++++ lib/galaxy/datatypes/tabular.py | 2 ++ lib/galaxy/util/__init__.py | 8 +++++++- tool-data/shared/bx/bx_build_sites.txt | 1 + tool_conf.xml.main | 1 + universe_wsgi.ini.sample | 3 ++- 7 files changed, 38 insertions(+), 2 deletions(-) diffs (118 lines): diff -r 43249ea9d72a -r 297d8c9c5eb0 lib/galaxy/config.py --- a/lib/galaxy/config.py Wed Feb 17 12:25:17 2010 -0500 +++ b/lib/galaxy/config.py Wed Feb 17 12:45:32 2010 -0500 @@ -81,6 +81,7 @@ self.log_memory_usage = string_as_bool( kwargs.get( 'log_memory_usage', 'False' ) ) self.log_actions = string_as_bool( kwargs.get( 'log_actions', 'False' ) ) self.log_events = string_as_bool( kwargs.get( 'log_events', 'False' ) ) + self.bx_display_sites = kwargs.get( 'bx_display_sites', "main" ).lower().split(",") self.ucsc_display_sites = kwargs.get( 'ucsc_display_sites', "main,test,archaea,ucla" ).lower().split(",") self.gbrowse_display_sites = kwargs.get( 'gbrowse_display_sites', "main,test,tair" ).lower().split(",") self.genetrack_display_sites = kwargs.get( 'genetrack_display_sites', "main,test" ).lower().split(",") diff -r 43249ea9d72a -r 297d8c9c5eb0 lib/galaxy/datatypes/interval.py --- a/lib/galaxy/datatypes/interval.py Wed Feb 17 12:25:17 2010 -0500 +++ b/lib/galaxy/datatypes/interval.py Wed Feb 17 12:45:32 2010 -0500 @@ -54,6 +54,7 @@ """Initialize interval datatype, by adding UCSC display apps""" Tabular.__init__(self, **kwd) self.add_display_app ( 'ucsc', 'display at UCSC', 'as_ucsc_display_file', 'ucsc_links' ) + self.add_display_app ( 'main', 'BX', 'as_bx_display_file', 'bx_links' ) def init_meta( self, dataset, copy_from=None ): Tabular.init_meta( self, dataset, copy_from=copy_from ) @@ -246,6 +247,29 @@ link = '%s?redirect_url=%s&display_url=%s' % ( internal_url, redirect_url, display_url ) ret_val.append( (site_name, link) ) return ret_val + def bx_links( self, dataset, type, app, base_url ): + # TODO: abstract these methods to eliminate duplicate code. + ret_val = [] + if dataset.has_data: + viewport_tuple = self.get_estimated_display_viewport(dataset) + if viewport_tuple: + chrom = viewport_tuple[0] + start = viewport_tuple[1] + stop = viewport_tuple[2] + for site_name, site_url in util.get_bx_by_build(dataset.dbkey): + if site_name in app.config.bx_display_sites: + # HACK: UCSC doesn't support https, so force http even + # if our URL scheme is https. Making this work + # requires additional hackery in your upstream proxy. + # If UCSC ever supports https, remove this hack. + internal_url = "%s" % url_for( controller='dataset', dataset_id=dataset.id, action='display_at', filename='bx_' + site_name ) + if base_url.startswith( 'https://' ): + base_url = base_url.replace( 'https', 'http', 1 ) + display_url = urllib.quote_plus( "%s%s/display_as?id=%i&display_app=%s&authz_method=display_at" % (base_url, url_for( controller='root' ), dataset.id, type) ) + redirect_url = urllib.quote_plus( "%sdb=%s&position=%s:%s-%s&hgt.customText=%%s" % (site_url, dataset.dbkey, chrom, start, stop ) ) + link = '%s?redirect_url=%s&display_url=%s' % ( internal_url, redirect_url, display_url ) + ret_val.append( (site_name, link) ) + return ret_val def validate( self, dataset ): """Validate an interval file using the bx GenomicIntervalReader""" diff -r 43249ea9d72a -r 297d8c9c5eb0 lib/galaxy/datatypes/tabular.py --- a/lib/galaxy/datatypes/tabular.py Wed Feb 17 12:25:17 2010 -0500 +++ b/lib/galaxy/datatypes/tabular.py Wed Feb 17 12:45:32 2010 -0500 @@ -214,6 +214,8 @@ return open( dataset.file_name ) def as_ucsc_display_file( self, dataset, **kwd ): return open( dataset.file_name ) + def as_bx_display_file( self, dataset, **kwd ): + return open( dataset.file_name ) class Taxonomy( Tabular ): def __init__(self, **kwd): diff -r 43249ea9d72a -r 297d8c9c5eb0 lib/galaxy/util/__init__.py --- a/lib/galaxy/util/__init__.py Wed Feb 17 12:25:17 2010 -0500 +++ b/lib/galaxy/util/__init__.py Wed Feb 17 12:45:32 2010 -0500 @@ -278,7 +278,12 @@ def string_to_object( s ): return pickle.loads( binascii.unhexlify( s ) ) - +def get_bx_by_build(build): + sites = [] + for site in bx_build_sites: + if build in site['builds']: + sites.append((site['name'],site['url'])) + return sites def get_ucsc_by_build(build): sites = [] for site in ucsc_build_sites: @@ -471,6 +476,7 @@ galaxy_root_path = os.path.join(__path__[0], "..","..","..") # The dbnames list is used in edit attributes and the upload tool dbnames = read_dbnames( os.path.join( galaxy_root_path, "tool-data", "shared", "ucsc", "builds.txt" ) ) +bx_build_sites = read_build_sites( os.path.join( galaxy_root_path, "tool-data", "shared", "bx", "bx_build_sites.txt" ) ) ucsc_build_sites = read_build_sites( os.path.join( galaxy_root_path, "tool-data", "shared", "ucsc", "ucsc_build_sites.txt" ) ) gbrowse_build_sites = read_build_sites( os.path.join( galaxy_root_path, "tool-data", "shared", "gbrowse", "gbrowse_build_sites.txt" ) ) genetrack_sites = read_build_sites( os.path.join( galaxy_root_path, "tool-data", "shared", "genetrack", "genetrack_sites.txt" ), check_builds=False ) diff -r 43249ea9d72a -r 297d8c9c5eb0 tool-data/shared/bx/bx_build_sites.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/shared/bx/bx_build_sites.txt Wed Feb 17 12:45:32 2010 -0500 @@ -0,0 +1,1 @@ +main http://main.genome-browser.bx.psu.edu/cgi-bin/hgTracks? hg18,hg19,mm8,mm9 diff -r 43249ea9d72a -r 297d8c9c5eb0 tool_conf.xml.main --- a/tool_conf.xml.main Wed Feb 17 12:25:17 2010 -0500 +++ b/tool_conf.xml.main Wed Feb 17 12:45:32 2010 -0500 @@ -4,6 +4,7 @@ <tool file="data_source/upload.xml"/> <tool file="data_source/ucsc_tablebrowser.xml" /> <tool file="data_source/ucsc_tablebrowser_archaea.xml" /> + <tool file="data_source/bx_browser.xml" /> <tool file="data_source/microbial_import.xml" /> <tool file="data_source/biomart.xml" /> <tool file="data_source/gramene_mart.xml" /> diff -r 43249ea9d72a -r 297d8c9c5eb0 universe_wsgi.ini.sample --- a/universe_wsgi.ini.sample Wed Feb 17 12:25:17 2010 -0500 +++ b/universe_wsgi.ini.sample Wed Feb 17 12:45:32 2010 -0500 @@ -105,7 +105,8 @@ # Use the new iframe / javascript based layout use_new_layout = true -# Comma separated list of UCSC / gbrowse / GeneTrack browsers to use for viewing +# Comma separated list of bx / UCSC / gbrowse / GeneTrack browsers to use for viewing +bx_display_sites = main ucsc_display_sites = main,test,archaea,ucla gbrowse_display_sites = main,test,tair # Define your GeneTrack servers in tool-data/shared/genetrack/genetrack_sites.txt

1 0

[hg] galaxy 3405: Update to workflow UI: (1) made options menu; ...
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/43249ea9d72a changeset: 3405:43249ea9d72a user: jeremy goecks <jeremy.goecks(a)emory.edu> date: Wed Feb 17 12:25:17 2010 -0500 description: Update to workflow UI: (1) made options menu; (2) created styles for item metadata; and (3) put item annotations in own metadata form below tool form. diffstat: lib/galaxy/web/controllers/page.py | 3 +- static/june_2007_style/base.css.tmpl | 44 +++++++ static/june_2007_style/blue/base.css | 7 + static/scripts/autocomplete_tagging.js | 2 + static/scripts/galaxy.workflow_editor.canvas.js | 1 - static/scripts/packed/autocomplete_tagging.js | 2 +- static/scripts/packed/galaxy.workflow_editor.canvas.js | 2 +- templates/workflow/editor.mako | 103 ++++++++-------- 8 files changed, 109 insertions(+), 55 deletions(-) diffs (355 lines): diff -r 1e85451c9c86 -r 43249ea9d72a lib/galaxy/web/controllers/page.py --- a/lib/galaxy/web/controllers/page.py Wed Feb 17 11:07:08 2010 -0500 +++ b/lib/galaxy/web/controllers/page.py Wed Feb 17 12:25:17 2010 -0500 @@ -570,7 +570,6 @@ @web.expose def display_by_username_and_slug( self, trans, username, slug ): """ Display page based on a username and slug. """ - session = trans.sa_session # Get page. session = trans.sa_session @@ -588,7 +587,7 @@ # Process page content. processor = _PageContentProcessor( trans, 'utf-8', 'text/html', self._get_embed_html ) processor.feed( page.latest_revision.content ) - # Output is string, so convert to unicode. + # Output is string, so convert to unicode for display. page_content = unicode( processor.output(), 'utf-8' ) return trans.fill_template_mako( "page/display.mako", item=page, item_data=page_content, content_only=True ) diff -r 1e85451c9c86 -r 43249ea9d72a static/june_2007_style/base.css.tmpl --- a/static/june_2007_style/base.css.tmpl Wed Feb 17 11:07:08 2010 -0500 +++ b/static/june_2007_style/base.css.tmpl Wed Feb 17 12:25:17 2010 -0500 @@ -111,6 +111,50 @@ overflow: auto; } +div.metadataForm { + border:solid #aaaaaa 1px; +} + +div.metadataFormTitle { + font-weight:bold; + padding:5px; + padding-left:10px; + padding-right:10px; + background:#cccccc; + background-repeat:repeat-x; + background-position:top; + border-bottom:solid #aaaaaa 1px; +} + +div.metadataFormBody { + background:#FFFFFF; + background-image:url(form_body_bg.png); + background-repeat:repeat-x; + background-position:top; + padding:5px 0; +} + +div.metadataFormBody div.metadataFormTitle { + background:transparent; + border:none; + font-weight:bold; + border-bottom:solid #dcb790 1px; + margin-bottom:5px; +} + +div.metadataFormDisabled div.metadataFormTitle { + background:#eee; + border-color:#999; +} + +div.metadataFormDisabled { + border-color:#999; +} + +div.metadataHelpBody { + width:100%;overflow:auto; +} + div.titleRow { font-weight: bold; border-bottom: dotted gray 1px; diff -r 1e85451c9c86 -r 43249ea9d72a static/june_2007_style/blue/base.css --- a/static/june_2007_style/blue/base.css Wed Feb 17 11:07:08 2010 -0500 +++ b/static/june_2007_style/blue/base.css Wed Feb 17 12:25:17 2010 -0500 @@ -22,6 +22,13 @@ div.toolFormDisabled{border-color:#999;} div.toolHelp{} div.toolHelpBody{width:100%;overflow:auto;} +div.metadataForm{border:solid #aaaaaa 1px;} +div.metadataFormTitle{font-weight:bold;padding:5px;padding-left:10px;padding-right:10px;background:#cccccc;background-repeat:repeat-x;background-position:top;border-bottom:solid #aaaaaa 1px;} +div.metadataFormBody{background:#FFFFFF;background-image:url(form_body_bg.png);background-repeat:repeat-x;background-position:top;padding:5px 0;} +div.metadataFormBody div.metadataFormTitle{background:transparent;border:none;font-weight:bold;border-bottom:solid #dcb790 1px;margin-bottom:5px;} +div.metadataFormDisabled div.metadataFormTitle{background:#eee;border-color:#999;} +div.metadataFormDisabled{border-color:#999;} +div.metadataHelpBody{width:100%;overflow:auto;} div.titleRow{font-weight:bold;border-bottom:dotted gray 1px;margin-bottom:0.5em;padding-bottom:0.25em;} div.form{border:solid #d8b365 1px;} div.form-title{font-weight:bold;padding:5px 10px;background:#ebd9b2;background-image:url(form_title_bg.png);background-repeat:repeat-x;background-position:top;border-bottom:solid #d8b365 1px;} diff -r 1e85451c9c86 -r 43249ea9d72a static/scripts/autocomplete_tagging.js --- a/static/scripts/autocomplete_tagging.js Wed Feb 17 11:07:08 2010 -0500 +++ b/static/scripts/autocomplete_tagging.js Wed Feb 17 12:25:17 2010 -0500 @@ -323,12 +323,14 @@ tag_area.hide(); else { + /* var num_tags = array_length(settings.tags); if (num_tags == 0) { add_tag_button.hide(); tag_input_field.show(); } + */ } // Initialize tag names. diff -r 1e85451c9c86 -r 43249ea9d72a static/scripts/galaxy.workflow_editor.canvas.js --- a/static/scripts/galaxy.workflow_editor.canvas.js Wed Feb 17 11:07:08 2010 -0500 +++ b/static/scripts/galaxy.workflow_editor.canvas.js Wed Feb 17 12:25:17 2010 -0500 @@ -307,7 +307,6 @@ node = this; this.tool_state = data.tool_state; this.form_html = data.form_html; - this.annotation = data.annotation; this.tool_errors = data.tool_errors; if ( this.tool_errors ) { el.addClass( "tool-node-error" ); diff -r 1e85451c9c86 -r 43249ea9d72a static/scripts/packed/autocomplete_tagging.js --- a/static/scripts/packed/autocomplete_tagging.js Wed Feb 17 11:07:08 2010 -0500 +++ b/static/scripts/packed/autocomplete_tagging.js Wed Feb 17 12:25:17 2010 -0500 @@ -1,1 +1,1 @@ -function init_tag_click_function(b,a){$(b).find(".tag-name").each(function(){$(this).click(function(){var d=$(this).text();var c=d.split(":");a(c[0],c[1]);return true})})}jQuery.fn.autocomplete_tagging=function(q){var g={get_toggle_link_text_fn:function(r){var t="";var s=o(r);if(s!=0){t=s+(s!=0?" 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unction(){}});return true})}function a(q){var r=new Array();for(key in q){r[r.length]=key+"-->"+q[key]}return"{"+r.join(",")+"}"}function m(q){return q.split(":")}function k(q){var r=$("<img src='"+e.delete_tag_img+"'/>").addClass("delete-tag-img");d(r);var s=$("<span>").text(q).addClass("tag-name");s.click(function(){tag_name_and_value=q.split(":");e.tag_click_fn(tag_name_and_value[0],tag_name_and_value[1]);return true});var t=$("<span></span>").addClass("tag-button");t.append(s);if(e.editable){t.append(r)}return t}}; \ No newline at end of file diff -r 1e85451c9c86 -r 43249ea9d72a static/scripts/packed/galaxy.workflow_editor.canvas.js --- a/static/scripts/packed/galaxy.workflow_editor.canvas.js Wed Feb 17 11:07:08 2010 -0500 +++ b/static/scripts/packed/galaxy.workflow_editor.canvas.js Wed Feb 17 12:25:17 2010 -0500 @@ -1,1 +1,1 @@ -function Terminal(a){this.element=a;this.connectors=[]}$.extend(Terminal.prototype,{connect:function(a){this.connectors.push(a);if(this.node){this.node.changed()}},disconnect:function(a){this.connectors.splice($.inArray(a,this.connectors),1);if(this.node){this.node.changed()}},redraw:function(){$.each(this.connectors,function(a,b){b.redraw()})},destroy:function(){$.each(this.connectors.slice(),function(a,b){b.destroy()})}});function OutputTerminal(a,b){Terminal.call(this,a);this.datatype=b}OutputTerminal.prototype=new Terminal();function InputTerminal(a,b){Terminal.call(this,a);this.datatypes=b}InputTerminal.prototype=new Terminal();$.extend(InputTerminal.prototype,{can_accept:function(a){if(this.connectors.length<1){for(var b in this.datatypes){if(a.datatype=="input"){return true}if(issubtype(a.datatype,this.datatypes[b])){return true}}}return false}});function Connector(b,a){this.canvas=null;this.dragging=false;this.inner_color="#FFFFFF";this.outer_color="#D8B365";if(b&&a) {this.connect(b,a)}}$.extend(Connector.prototype,{connect:function(b,a){this.handle1=b;this.handle1.connect(this);this.handle2=a;this.handle2.connect(this)},destroy:function(){if(this.handle1){this.handle1.disconnect(this)}if(this.handle2){this.handle2.disconnect(this)}$(this.canvas).remove()},redraw:function(){var d=$("#canvas-container");if(!this.canvas){this.canvas=document.createElement("canvas");if(window.G_vmlCanvasManager){G_vmlCanvasManager.initElement(this.canvas)}d.append($(this.canvas));if(this.dragging){this.canvas.style.zIndex="300"}}var n=function(c){return $(c).offset().left-d.offset().left};var i=function(c){return $(c).offset().top-d.offset().top};var h=n(this.handle1.element)+5;var g=i(this.handle1.element)+5;var p=n(this.handle2.element)+5;var m=i(this.handle2.element)+5;var f=100;var k=Math.min(h,p);var a=Math.max(h,p);var j=Math.min(g,m);var t=Math.max(g,m);var b=Math.min(Math.max(Math.abs(t-j)/2,100),300);var o=k-f;var s=j-f;var q=a-k+2*f;var l=t-j+2*f; this.canvas.style.left=o+"px";this.canvas.style.top=s+"px";this.canvas.setAttribute("width",q);this.canvas.setAttribute("height",l);h-=o;g-=s;p-=o;m-=s;var r=this.canvas.getContext("2d");r.lineCap="round";r.strokeStyle=this.outer_color;r.lineWidth=7;r.beginPath();r.moveTo(h,g);r.bezierCurveTo(h+b,g,p-b,m,p,m);r.stroke();r.strokeStyle=this.inner_color;r.lineWidth=5;r.beginPath();r.moveTo(h,g);r.bezierCurveTo(h+b,g,p-b,m,p,m);r.stroke()}});function Node(a){this.element=a;this.input_terminals={};this.output_terminals={};this.tool_errors={}}$.extend(Node.prototype,{enable_input_terminal:function(d,a,b){var c=this;$(d).each(function(){var f=this.terminal=new InputTerminal(this,b);f.node=c;f.name=a;$(this).bind("dropstart",function(g){g.dragProxy.terminal.connectors[0].inner_color="#BBFFBB"}).bind("dropend",function(g){g.dragProxy.terminal.connectors[0].inner_color="#FFFFFF"}).bind("drop",function(g){(new Connector(g.dragTarget.terminal,g.dropTarget.terminal)).redraw()}).bind("hov er",function(){if(f.connectors.length>0){var g=$("<div class='callout'></div>").css({display:"none"}).appendTo("body").append($("<div class='buttons'></div>").append($("<img src='../images/delete_icon.png' />").click(function(){$.each(f.connectors,function(i,h){h.destroy()});g.remove()}))).bind("mouseleave",function(){$(this).remove()});g.css({top:$(this).offset().top-2,left:$(this).offset().left-g.width(),"padding-right":$(this).width()}).show()}});c.input_terminals[a]=f})},enable_output_terminal:function(d,a,b){var c=this;$(d).each(function(){var g=this;var f=this.terminal=new OutputTerminal(this,b);f.node=c;f.name=a;$(this).bind("dragstart",function(j){var i=$('<div class="drag-terminal" style="position: absolute;"></div>').appendTo("#canvas-container").get(0);i.terminal=new OutputTerminal(i);var k=new Connector();k.dragging=true;k.connect(this.terminal,i.terminal);$.dropManage({filter:function(h){return this.terminal.can_accept(f)}}).addClass("input-terminal-active");ret urn i}).bind("drag",function(i){var h=function(){var k=$(i.dragProxy).offsetParent().offset(),j=i.offsetX-k.left,l=i.offsetY-k.top;$(i.dragProxy).css({left:j,top:l});i.dragProxy.terminal.redraw();canvas_manager.update_viewport_overlay()};h();$("#canvas-container").get(0).scroll_panel.test(i,h)}).bind("dragend",function(h){h.dragProxy.terminal.connectors[0].destroy();$(h.dragProxy).remove();$.dropManage().removeClass("input-terminal-active");$("#canvas-container").get(0).scroll_panel.stop()});c.output_terminals[a]=f})},redraw:function(){$.each(this.input_terminals,function(a,b){b.redraw()});$.each(this.output_terminals,function(a,b){b.redraw()})},destroy:function(){$.each(this.input_terminals,function(a,b){b.destroy()});$.each(this.output_terminals,function(a,b){b.destroy()});workflow.remove_node(this);$(this.element).remove()},make_active:function(){$(this.element).addClass("toolForm-active")},make_inactive:function(){var a=this.element.get(0);(function(b){b.removeChild(a);b .appendChild(a)})(a.parentNode);$(a).removeClass("toolForm-active")},init_field_data:function(g){var d=this.element;if(g.type){this.type=g.type}this.name=g.name;this.form_html=g.form_html;this.tool_state=g.tool_state;this.tool_errors=g.tool_errors;this.tooltip=g.tooltip?g.tooltip:"";this.annotation=g.annotation;if(this.tool_errors){d.addClass("tool-node-error")}else{d.removeClass("tool-node-error")}var c=this;var a=d.find(".toolFormBody");a.find("div").remove();var h=$("<div class='inputs'></div>").appendTo(a);$.each(g.data_inputs,function(j,b){var f=$("<div class='terminal input-terminal'></div>");c.enable_input_terminal(f,b.name,b.extensions);h.append($("<div class='form-row dataRow input-data-row' name='"+b.name+"'>"+b.label+"</div>").prepend(f))});if((g.data_inputs.length>0)&&(g.data_outputs.length>0)){a.append($("<div class='rule'></div>"))}$.each(g.data_outputs,function(k,b){var j=$("<div class='terminal output-terminal'></div>");c.enable_output_terminal(j,b.name,b.ext ension);var f=b.name;if(b.extension!="input"){f=f+" ("+b.extension+")"}a.append($("<div class='form-row dataRow'>"+f+"</div>").append(j))});workflow.node_changed(this)},update_field_data:function(f){var c=$(this.element),d=this;this.tool_state=f.tool_state;this.form_html=f.form_html;this.annotation=f.annotation;this.tool_errors=f.tool_errors;if(this.tool_errors){c.addClass("tool-node-error")}else{c.removeClass("tool-node-error")}var g=c.find("div.inputs");var b=$("<div class='inputs'></div>");var a=g.find("div.input-data-row");$.each(f.data_inputs,function(k,h){var j=$("<div class='terminal input-terminal'></div>");d.enable_input_terminal(j,h.name,h.extensions);g.find("div[name="+h.name+"]").each(function(){$(this).find(".input-terminal").each(function(){var i=this.terminal.connectors[0];if(i){j[0].terminal.connectors[0]=i;i.handle2=j[0].terminal}});$(this).remove()});b.append($("<div class='form-row dataRow input-data-row' name='"+h.name+"'>"+h.label+"</div>").prepend(j))}) ;g.replaceWith(b);g.find("div.input-data-row > .terminal").each(function(){this.terminal.destroy()});this.changed();this.redraw()},error:function(d){var a=$(this.element).find(".toolFormBody");a.find("div").remove();var c="<div style='color: red; text-style: italic;'>"+d+"</div>";this.form_html=c;a.html(c);workflow.node_changed(this)},changed:function(){workflow.node_changed(this)}});function Workflow(a){this.canvas_container=a;this.id_counter=0;this.nodes={};this.name=null;this.has_changes=false;this.active_form_has_changes=false}$.extend(Workflow.prototype,{add_node:function(a){a.id=this.id_counter;a.element.attr("id","wf-node-step-"+a.id);this.id_counter++;this.nodes[a.id]=a;this.has_changes=true;a.workflow=this},remove_node:function(a){if(this.active_node==a){this.clear_active_node()}delete this.nodes[a.id];this.has_changes=true},remove_all:function(){wf=this;$.each(this.nodes,function(b,a){a.destroy();wf.remove_node(a)})},to_simple:function(){var a={};$.each(this.nodes, function(b,d){var f={};$.each(d.input_terminals,function(g,h){f[h.name]=null;$.each(h.connectors,function(j,k){f[h.name]={id:k.handle1.node.id,output_name:k.handle1.name}})});var c={id:d.id,type:d.type,tool_id:d.tool_id,tool_state:d.tool_state,tool_errors:d.tool_errors,input_connections:f,position:$(d.element).position(),annotation:d.annotation};a[d.id]=c});return{steps:a}},from_simple:function(a){wf=this;var b=0;wf.name=a.name;$.each(a.steps,function(f,d){var c=prebuild_node("tool",d.name,d.tool_id);c.init_field_data(d);if(d.position){c.element.css({top:d.position.top,left:d.position.left})}c.id=d.id;wf.nodes[c.id]=c;b=Math.max(b,parseInt(f))});wf.id_counter=b+1;$.each(a.steps,function(f,d){var c=wf.nodes[f];$.each(d.input_connections,function(h,g){if(g){var i=wf.nodes[g.id];var j=new Connector();j.connect(i.output_terminals[g.output_name],c.input_terminals[h]);j.redraw()}})})},check_changes_in_active_form:function(){if(this.active_form_has_changes){this.has_changes=true;$( "#right-content").find("form").submit();this.active_form_has_changes=false}},clear_active_node:function(){if(this.active_node){this.active_node.make_inactive();this.active_node=null}parent.show_form_for_tool("<div>No node selected</div>")},activate_node:function(a){if(this.active_node!=a){this.check_changes_in_active_form();this.clear_active_node();parent.show_form_for_tool(a.form_html+a.tooltip,a);a.make_active();this.active_node=a}},node_changed:function(a){this.has_changes=true;if(this.active_node==a){parent.show_form_for_tool(a.form_html+a.tooltip,a)}},layout:function(){this.check_changes_in_active_form();var i={};var b={};$.each(this.nodes,function(l,k){if(i[l]===undefined){i[l]=0}if(b[l]===undefined){b[l]=[]}});$.each(this.nodes,function(l,k){$.each(k.input_terminals,function(m,n){$.each(n.connectors,function(p,q){var o=q.handle1.node;i[k.id]+=1;b[o.id].push(k.id)})})});node_ids_by_level=[];while(true){level_parents=[];for(var a in i){if(i[a]==0){level_parents.push(a)} }if(level_parents.length==0){break}node_ids_by_level.push(level_parents);for(var f in level_parents){var j=level_parents[f];delete i[j];for(var g in b[j]){i[b[j][g]]-=1}}}if(i.length){return}var d=this.nodes;var h=80;v_pad=30;var c=h;$.each(node_ids_by_level,function(k,l){l.sort(function(p,o){return $(d[p].element).position().top-$(d[o].element).position().top});var m=0;var n=v_pad;$.each(l,function(o,r){var q=d[r];var p=$(q.element);$(p).css({top:n,left:c});m=Math.max(m,$(p).width());n+=$(p).height()+v_pad});c+=m+h});$.each(d,function(k,l){l.redraw()})},bounds_for_all_nodes:function(){var d=Infinity,b=-Infinity,c=Infinity,a=-Infinity,f;$.each(this.nodes,function(h,g){e=$(g.element);f=e.position();d=Math.min(d,f.left);b=Math.max(b,f.left+e.width());c=Math.min(c,f.top);a=Math.max(a,f.top+e.width())});return{xmin:d,xmax:b,ymin:c,ymax:a}},fit_canvas_to_nodes:function(){var a=this.bounds_for_all_nodes();var f=this.canvas_container.position();var i=this.canvas_container.parent(); var d=fix_delta(a.xmin,100);var h=fix_delta(a.ymin,100);d=Math.max(d,f.left);h=Math.max(h,f.top);var c=f.left-d;var g=f.top-h;var b=round_up(a.xmax+100,100)+d;var j=round_up(a.ymax+100,100)+h;b=Math.max(b,-c+i.width());j=Math.max(j,-g+i.height());this.canvas_container.css({left:c,top:g,width:b,height:j});this.canvas_container.children().each(function(){var k=$(this).position();$(this).css("left",k.left+d);$(this).css("top",k.top+h)})}});function fix_delta(a,b){if(a<b||a>3*b){new_pos=(Math.ceil(((a%b))/b)+1)*b;return(-(a-new_pos))}return 0}function round_up(a,b){return Math.ceil(a/b)*b}function prebuild_node(l,j,r){var i=$("<div class='toolForm toolFormInCanvas'></div>");var g=new Node(i);g.type=l;if(l=="tool"){g.tool_id=r}var n=$("<div class='toolFormTitle unselectable'>"+j+"</div>");i.append(n);i.css("left",$(window).scrollLeft()+20);i.css("top",$(window).scrollTop()+20);var m=$("<div class='toolFormBody'></div>");var h="<div><img height='16' align='middle' src='../images/l oading_small_white_bg.gif'/> loading tool info...</div>";m.append(h);g.form_html=h;i.append(m);var k=$("<div class='buttons' style='float: right;'></div>");k.append($("<img src='../images/delete_icon.png' />").click(function(b){g.destroy()}).hover(function(){$(this).attr("src","../images/delete_icon_dark.png")},function(){$(this).attr("src","../images/delete_icon.png")}));i.appendTo("#canvas-container");var d=$("#canvas-container").position();var c=$("#canvas-container").parent();var a=i.width();var q=i.height();i.css({left:(-d.left)+(c.width()/2)-(a/2),top:(-d.top)+(c.height()/2)-(q/2)});k.prependTo(n);a+=(k.width()+10);i.css("width",a);$(i).bind("dragstart",function(){workflow.activate_node(g)}).bind("dragend",function(){workflow.node_changed(this);workflow.fit_canvas_to_nodes();canvas_manager.draw_overview()}).bind("dragclickonly",function(){workflow.activate_node(g)}).bind("drag",function(o){var f=$(this).offsetParent().offset(),b=o.offsetX-f.left,p=o.offsetY-f.top;$(thi s).css({left:b,top:p});$(this).find(".terminal").each(function(){this.terminal.redraw()})});return g}var ext_to_type=null;var type_to_type=null;function issubtype(b,a){b=ext_to_type[b];a=ext_to_type[a];return(type_to_type[b])&&(a in type_to_type[b])}function populate_datatype_info(a){ext_to_type=a.ext_to_class_name;type_to_type=a.class_to_classes}function ScrollPanel(a){this.panel=a}$.extend(ScrollPanel.prototype,{test:function(v,d){clearTimeout(this.timeout);var k=v.pageX,j=v.pageY,l=$(this.panel),c=l.position(),b=l.width(),i=l.height(),w=l.parent(),s=w.width(),a=w.height(),r=w.offset(),p=r.left,m=r.top,A=p+w.width(),u=m+w.height(),B=-(b-(s/2)),z=-(i-(a/2)),g=(s/2),f=(a/2),h=false,q=5,o=23;if(k-q<p){if(c.left<g){var n=Math.min(o,g-c.left);l.css("left",c.left+n);h=true}}else{if(k+q>A){if(c.left>B){var n=Math.min(o,c.left-B);l.css("left",c.left-n);h=true}}else{if(j-q<m){if(c.top<f){var n=Math.min(o,f-c.top);l.css("top",c.top+n);h=true}}else{if(j+q>u){if(c.top>z){var n=Math.mi n(o,c.top-B);l.css("top",(c.top-n)+"px");h=true}}}}}if(h){d();var l=this;this.timeout=setTimeout(function(){l.test(v,d)},50)}},stop:function(b,a){clearTimeout(this.timeout)}});function CanvasManager(b,a){this.cv=b;this.cc=this.cv.find("#canvas-container");this.oc=a.find("#overview-canvas");this.ov=a.find("#overview-viewport");this.init_drag()}$.extend(CanvasManager.prototype,{init_drag:function(){var b=this;var a=function(f,g){f=Math.min(f,b.cv.width()/2);f=Math.max(f,-b.cc.width()+b.cv.width()/2);g=Math.min(g,b.cv.height()/2);g=Math.max(g,-b.cc.height()+b.cv.height()/2);b.cc.css({left:f,top:g});b.update_viewport_overlay()};this.cc.each(function(){this.scroll_panel=new ScrollPanel(this)});var d,c;this.cv.bind("dragstart",function(g){var h=$(this).offset();var f=b.cc.position();c=f.top-h.top;d=f.left-h.left}).bind("drag",function(f){a(f.offsetX+d,f.offsetY+c)}).bind("dragend",function(){workflow.fit_canvas_to_nodes();b.draw_overview()});this.ov.bind("drag",function(k){var j=b .cc.width(),g=b.cc.height(),f=b.oc.width(),h=b.oc.height(),i=$(this).offsetParent().offset(),m=k.offsetX-i.left,l=k.offsetY-i.top;a(-(m/f*j),-(l/h*g))}).bind("dragend",function(){workflow.fit_canvas_to_nodes();b.draw_overview()});$("#overview-border").bind("drag",function(g){var i=$(this).offsetParent();var h=i.offset();var f=Math.max(i.width()-(g.offsetX-h.left),i.height()-(g.offsetY-h.top));$(this).css({width:f,height:f});b.draw_overview()});$("#overview-border div").bind("drag",function(f){})},update_viewport_overlay:function(){var b=this.cc,f=this.cv,a=this.oc,c=this.ov,d=b.width(),j=b.height(),i=a.width(),g=a.height(),h=b.position();c.css({left:-(h.left/d*i),top:-(h.top/j*g),width:(f.width()/d*i)-2,height:(f.height()/j*g)-2})},draw_overview:function(){var j=$("#overview-canvas"),m=j.parent().parent().width(),i=j.get(0).getContext("2d"),d=$("#canvas-container").width(),l=$("#canvas-container").height();var g,a,k,f;var h=this.cv.width();var b=this.cv.height();if(d<h&&l<b) {k=d/h*m;f=(m-k)/2;g=l/b*m;a=(m-g)/2}else{if(d<l){a=0;g=m;k=Math.ceil(g*d/l);f=(m-k)/2}else{k=m;f=0;g=Math.ceil(k*l/d);a=(m-g)/2}}j.parent().css({left:f,top:a,width:k,height:g});j.attr("width",k);j.attr("height",g);i.fillStyle="#D2C099";i.strokeStyle="#D8B365";i.lineWidth=1;$.each(workflow.nodes,function(t,q){var s=$(q.element),n=s.position(),c=n.left/d*k,r=n.top/l*g,o=s.width()/d*k,p=s.height()/l*g;i.fillRect(c,r,o,p);i.strokeRect(c,r,o,p)});this.update_viewport_overlay()}}); \ No newline at end of file +function Terminal(a){this.element=a;this.connectors=[]}$.extend(Terminal.prototype,{connect:function(a){this.connectors.push(a);if(this.node){this.node.changed()}},disconnect:function(a){this.connectors.splice($.inArray(a,this.connectors),1);if(this.node){this.node.changed()}},redraw:function(){$.each(this.connectors,function(a,b){b.redraw()})},destroy:function(){$.each(this.connectors.slice(),function(a,b){b.destroy()})}});function OutputTerminal(a,b){Terminal.call(this,a);this.datatype=b}OutputTerminal.prototype=new Terminal();function InputTerminal(a,b){Terminal.call(this,a);this.datatypes=b}InputTerminal.prototype=new Terminal();$.extend(InputTerminal.prototype,{can_accept:function(a){if(this.connectors.length<1){for(var b in this.datatypes){if(a.datatype=="input"){return true}if(issubtype(a.datatype,this.datatypes[b])){return true}}}return false}});function Connector(b,a){this.canvas=null;this.dragging=false;this.inner_color="#FFFFFF";this.outer_color="#D8B365";if(b&&a) {this.connect(b,a)}}$.extend(Connector.prototype,{connect:function(b,a){this.handle1=b;this.handle1.connect(this);this.handle2=a;this.handle2.connect(this)},destroy:function(){if(this.handle1){this.handle1.disconnect(this)}if(this.handle2){this.handle2.disconnect(this)}$(this.canvas).remove()},redraw:function(){var d=$("#canvas-container");if(!this.canvas){this.canvas=document.createElement("canvas");if(window.G_vmlCanvasManager){G_vmlCanvasManager.initElement(this.canvas)}d.append($(this.canvas));if(this.dragging){this.canvas.style.zIndex="300"}}var n=function(c){return $(c).offset().left-d.offset().left};var i=function(c){return $(c).offset().top-d.offset().top};var h=n(this.handle1.element)+5;var g=i(this.handle1.element)+5;var p=n(this.handle2.element)+5;var m=i(this.handle2.element)+5;var f=100;var k=Math.min(h,p);var a=Math.max(h,p);var j=Math.min(g,m);var t=Math.max(g,m);var b=Math.min(Math.max(Math.abs(t-j)/2,100),300);var o=k-f;var s=j-f;var q=a-k+2*f;var l=t-j+2*f; this.canvas.style.left=o+"px";this.canvas.style.top=s+"px";this.canvas.setAttribute("width",q);this.canvas.setAttribute("height",l);h-=o;g-=s;p-=o;m-=s;var r=this.canvas.getContext("2d");r.lineCap="round";r.strokeStyle=this.outer_color;r.lineWidth=7;r.beginPath();r.moveTo(h,g);r.bezierCurveTo(h+b,g,p-b,m,p,m);r.stroke();r.strokeStyle=this.inner_color;r.lineWidth=5;r.beginPath();r.moveTo(h,g);r.bezierCurveTo(h+b,g,p-b,m,p,m);r.stroke()}});function Node(a){this.element=a;this.input_terminals={};this.output_terminals={};this.tool_errors={}}$.extend(Node.prototype,{enable_input_terminal:function(d,a,b){var c=this;$(d).each(function(){var f=this.terminal=new InputTerminal(this,b);f.node=c;f.name=a;$(this).bind("dropstart",function(g){g.dragProxy.terminal.connectors[0].inner_color="#BBFFBB"}).bind("dropend",function(g){g.dragProxy.terminal.connectors[0].inner_color="#FFFFFF"}).bind("drop",function(g){(new Connector(g.dragTarget.terminal,g.dropTarget.terminal)).redraw()}).bind("hov er",function(){if(f.connectors.length>0){var g=$("<div class='callout'></div>").css({display:"none"}).appendTo("body").append($("<div class='buttons'></div>").append($("<img src='../images/delete_icon.png' />").click(function(){$.each(f.connectors,function(i,h){h.destroy()});g.remove()}))).bind("mouseleave",function(){$(this).remove()});g.css({top:$(this).offset().top-2,left:$(this).offset().left-g.width(),"padding-right":$(this).width()}).show()}});c.input_terminals[a]=f})},enable_output_terminal:function(d,a,b){var c=this;$(d).each(function(){var g=this;var f=this.terminal=new OutputTerminal(this,b);f.node=c;f.name=a;$(this).bind("dragstart",function(j){var i=$('<div class="drag-terminal" style="position: absolute;"></div>').appendTo("#canvas-container").get(0);i.terminal=new OutputTerminal(i);var k=new Connector();k.dragging=true;k.connect(this.terminal,i.terminal);$.dropManage({filter:function(h){return this.terminal.can_accept(f)}}).addClass("input-terminal-active");ret urn i}).bind("drag",function(i){var h=function(){var k=$(i.dragProxy).offsetParent().offset(),j=i.offsetX-k.left,l=i.offsetY-k.top;$(i.dragProxy).css({left:j,top:l});i.dragProxy.terminal.redraw();canvas_manager.update_viewport_overlay()};h();$("#canvas-container").get(0).scroll_panel.test(i,h)}).bind("dragend",function(h){h.dragProxy.terminal.connectors[0].destroy();$(h.dragProxy).remove();$.dropManage().removeClass("input-terminal-active");$("#canvas-container").get(0).scroll_panel.stop()});c.output_terminals[a]=f})},redraw:function(){$.each(this.input_terminals,function(a,b){b.redraw()});$.each(this.output_terminals,function(a,b){b.redraw()})},destroy:function(){$.each(this.input_terminals,function(a,b){b.destroy()});$.each(this.output_terminals,function(a,b){b.destroy()});workflow.remove_node(this);$(this.element).remove()},make_active:function(){$(this.element).addClass("toolForm-active")},make_inactive:function(){var a=this.element.get(0);(function(b){b.removeChild(a);b .appendChild(a)})(a.parentNode);$(a).removeClass("toolForm-active")},init_field_data:function(g){var d=this.element;if(g.type){this.type=g.type}this.name=g.name;this.form_html=g.form_html;this.tool_state=g.tool_state;this.tool_errors=g.tool_errors;this.tooltip=g.tooltip?g.tooltip:"";this.annotation=g.annotation;if(this.tool_errors){d.addClass("tool-node-error")}else{d.removeClass("tool-node-error")}var c=this;var a=d.find(".toolFormBody");a.find("div").remove();var h=$("<div class='inputs'></div>").appendTo(a);$.each(g.data_inputs,function(j,b){var f=$("<div class='terminal input-terminal'></div>");c.enable_input_terminal(f,b.name,b.extensions);h.append($("<div class='form-row dataRow input-data-row' name='"+b.name+"'>"+b.label+"</div>").prepend(f))});if((g.data_inputs.length>0)&&(g.data_outputs.length>0)){a.append($("<div class='rule'></div>"))}$.each(g.data_outputs,function(k,b){var j=$("<div class='terminal output-terminal'></div>");c.enable_output_terminal(j,b.name,b.ext ension);var f=b.name;if(b.extension!="input"){f=f+" ("+b.extension+")"}a.append($("<div class='form-row dataRow'>"+f+"</div>").append(j))});workflow.node_changed(this)},update_field_data:function(f){var c=$(this.element),d=this;this.tool_state=f.tool_state;this.form_html=f.form_html;this.tool_errors=f.tool_errors;if(this.tool_errors){c.addClass("tool-node-error")}else{c.removeClass("tool-node-error")}var g=c.find("div.inputs");var b=$("<div class='inputs'></div>");var a=g.find("div.input-data-row");$.each(f.data_inputs,function(k,h){var j=$("<div class='terminal input-terminal'></div>");d.enable_input_terminal(j,h.name,h.extensions);g.find("div[name="+h.name+"]").each(function(){$(this).find(".input-terminal").each(function(){var i=this.terminal.connectors[0];if(i){j[0].terminal.connectors[0]=i;i.handle2=j[0].terminal}});$(this).remove()});b.append($("<div class='form-row dataRow input-data-row' name='"+h.name+"'>"+h.label+"</div>").prepend(j))});g.replaceWith(b);g.find("div .input-data-row > .terminal").each(function(){this.terminal.destroy()});this.changed();this.redraw()},error:function(d){var a=$(this.element).find(".toolFormBody");a.find("div").remove();var c="<div style='color: red; text-style: italic;'>"+d+"</div>";this.form_html=c;a.html(c);workflow.node_changed(this)},changed:function(){workflow.node_changed(this)}});function Workflow(a){this.canvas_container=a;this.id_counter=0;this.nodes={};this.name=null;this.has_changes=false;this.active_form_has_changes=false}$.extend(Workflow.prototype,{add_node:function(a){a.id=this.id_counter;a.element.attr("id","wf-node-step-"+a.id);this.id_counter++;this.nodes[a.id]=a;this.has_changes=true;a.workflow=this},remove_node:function(a){if(this.active_node==a){this.clear_active_node()}delete this.nodes[a.id];this.has_changes=true},remove_all:function(){wf=this;$.each(this.nodes,function(b,a){a.destroy();wf.remove_node(a)})},to_simple:function(){var a={};$.each(this.nodes,function(b,d){var f={};$.each (d.input_terminals,function(g,h){f[h.name]=null;$.each(h.connectors,function(j,k){f[h.name]={id:k.handle1.node.id,output_name:k.handle1.name}})});var c={id:d.id,type:d.type,tool_id:d.tool_id,tool_state:d.tool_state,tool_errors:d.tool_errors,input_connections:f,position:$(d.element).position(),annotation:d.annotation};a[d.id]=c});return{steps:a}},from_simple:function(a){wf=this;var b=0;wf.name=a.name;$.each(a.steps,function(f,d){var c=prebuild_node("tool",d.name,d.tool_id);c.init_field_data(d);if(d.position){c.element.css({top:d.position.top,left:d.position.left})}c.id=d.id;wf.nodes[c.id]=c;b=Math.max(b,parseInt(f))});wf.id_counter=b+1;$.each(a.steps,function(f,d){var c=wf.nodes[f];$.each(d.input_connections,function(h,g){if(g){var i=wf.nodes[g.id];var j=new Connector();j.connect(i.output_terminals[g.output_name],c.input_terminals[h]);j.redraw()}})})},check_changes_in_active_form:function(){if(this.active_form_has_changes){this.has_changes=true;$("#right-content").find("form" ).submit();this.active_form_has_changes=false}},clear_active_node:function(){if(this.active_node){this.active_node.make_inactive();this.active_node=null}parent.show_form_for_tool("<div>No node selected</div>")},activate_node:function(a){if(this.active_node!=a){this.check_changes_in_active_form();this.clear_active_node();parent.show_form_for_tool(a.form_html+a.tooltip,a);a.make_active();this.active_node=a}},node_changed:function(a){this.has_changes=true;if(this.active_node==a){parent.show_form_for_tool(a.form_html+a.tooltip,a)}},layout:function(){this.check_changes_in_active_form();var i={};var b={};$.each(this.nodes,function(l,k){if(i[l]===undefined){i[l]=0}if(b[l]===undefined){b[l]=[]}});$.each(this.nodes,function(l,k){$.each(k.input_terminals,function(m,n){$.each(n.connectors,function(p,q){var o=q.handle1.node;i[k.id]+=1;b[o.id].push(k.id)})})});node_ids_by_level=[];while(true){level_parents=[];for(var a in i){if(i[a]==0){level_parents.push(a)}}if(level_parents.length==0){ break}node_ids_by_level.push(level_parents);for(var f in level_parents){var j=level_parents[f];delete i[j];for(var g in b[j]){i[b[j][g]]-=1}}}if(i.length){return}var d=this.nodes;var h=80;v_pad=30;var c=h;$.each(node_ids_by_level,function(k,l){l.sort(function(p,o){return $(d[p].element).position().top-$(d[o].element).position().top});var m=0;var n=v_pad;$.each(l,function(o,r){var q=d[r];var p=$(q.element);$(p).css({top:n,left:c});m=Math.max(m,$(p).width());n+=$(p).height()+v_pad});c+=m+h});$.each(d,function(k,l){l.redraw()})},bounds_for_all_nodes:function(){var d=Infinity,b=-Infinity,c=Infinity,a=-Infinity,f;$.each(this.nodes,function(h,g){e=$(g.element);f=e.position();d=Math.min(d,f.left);b=Math.max(b,f.left+e.width());c=Math.min(c,f.top);a=Math.max(a,f.top+e.width())});return{xmin:d,xmax:b,ymin:c,ymax:a}},fit_canvas_to_nodes:function(){var a=this.bounds_for_all_nodes();var f=this.canvas_container.position();var i=this.canvas_container.parent();var d=fix_delta(a.xmin,100);v ar h=fix_delta(a.ymin,100);d=Math.max(d,f.left);h=Math.max(h,f.top);var c=f.left-d;var g=f.top-h;var b=round_up(a.xmax+100,100)+d;var j=round_up(a.ymax+100,100)+h;b=Math.max(b,-c+i.width());j=Math.max(j,-g+i.height());this.canvas_container.css({left:c,top:g,width:b,height:j});this.canvas_container.children().each(function(){var k=$(this).position();$(this).css("left",k.left+d);$(this).css("top",k.top+h)})}});function fix_delta(a,b){if(a<b||a>3*b){new_pos=(Math.ceil(((a%b))/b)+1)*b;return(-(a-new_pos))}return 0}function round_up(a,b){return Math.ceil(a/b)*b}function prebuild_node(l,j,r){var i=$("<div class='toolForm toolFormInCanvas'></div>");var g=new Node(i);g.type=l;if(l=="tool"){g.tool_id=r}var n=$("<div class='toolFormTitle unselectable'>"+j+"</div>");i.append(n);i.css("left",$(window).scrollLeft()+20);i.css("top",$(window).scrollTop()+20);var m=$("<div class='toolFormBody'></div>");var h="<div><img height='16' align='middle' src='../images/loading_small_white_bg.gif'/> loading tool info...</div>";m.append(h);g.form_html=h;i.append(m);var k=$("<div class='buttons' style='float: right;'></div>");k.append($("<img src='../images/delete_icon.png' />").click(function(b){g.destroy()}).hover(function(){$(this).attr("src","../images/delete_icon_dark.png")},function(){$(this).attr("src","../images/delete_icon.png")}));i.appendTo("#canvas-container");var d=$("#canvas-container").position();var c=$("#canvas-container").parent();var a=i.width();var q=i.height();i.css({left:(-d.left)+(c.width()/2)-(a/2),top:(-d.top)+(c.height()/2)-(q/2)});k.prependTo(n);a+=(k.width()+10);i.css("width",a);$(i).bind("dragstart",function(){workflow.activate_node(g)}).bind("dragend",function(){workflow.node_changed(this);workflow.fit_canvas_to_nodes();canvas_manager.draw_overview()}).bind("dragclickonly",function(){workflow.activate_node(g)}).bind("drag",function(o){var f=$(this).offsetParent().offset(),b=o.offsetX-f.left,p=o.offsetY-f.top;$(this).css({left:b,top:p});$(this ).find(".terminal").each(function(){this.terminal.redraw()})});return g}var ext_to_type=null;var type_to_type=null;function issubtype(b,a){b=ext_to_type[b];a=ext_to_type[a];return(type_to_type[b])&&(a in type_to_type[b])}function populate_datatype_info(a){ext_to_type=a.ext_to_class_name;type_to_type=a.class_to_classes}function ScrollPanel(a){this.panel=a}$.extend(ScrollPanel.prototype,{test:function(v,d){clearTimeout(this.timeout);var k=v.pageX,j=v.pageY,l=$(this.panel),c=l.position(),b=l.width(),i=l.height(),w=l.parent(),s=w.width(),a=w.height(),r=w.offset(),p=r.left,m=r.top,A=p+w.width(),u=m+w.height(),B=-(b-(s/2)),z=-(i-(a/2)),g=(s/2),f=(a/2),h=false,q=5,o=23;if(k-q<p){if(c.left<g){var n=Math.min(o,g-c.left);l.css("left",c.left+n);h=true}}else{if(k+q>A){if(c.left>B){var n=Math.min(o,c.left-B);l.css("left",c.left-n);h=true}}else{if(j-q<m){if(c.top<f){var n=Math.min(o,f-c.top);l.css("top",c.top+n);h=true}}else{if(j+q>u){if(c.top>z){var n=Math.min(o,c.top-B);l.css("top",(c.t op-n)+"px");h=true}}}}}if(h){d();var l=this;this.timeout=setTimeout(function(){l.test(v,d)},50)}},stop:function(b,a){clearTimeout(this.timeout)}});function CanvasManager(b,a){this.cv=b;this.cc=this.cv.find("#canvas-container");this.oc=a.find("#overview-canvas");this.ov=a.find("#overview-viewport");this.init_drag()}$.extend(CanvasManager.prototype,{init_drag:function(){var b=this;var a=function(f,g){f=Math.min(f,b.cv.width()/2);f=Math.max(f,-b.cc.width()+b.cv.width()/2);g=Math.min(g,b.cv.height()/2);g=Math.max(g,-b.cc.height()+b.cv.height()/2);b.cc.css({left:f,top:g});b.update_viewport_overlay()};this.cc.each(function(){this.scroll_panel=new ScrollPanel(this)});var d,c;this.cv.bind("dragstart",function(g){var h=$(this).offset();var f=b.cc.position();c=f.top-h.top;d=f.left-h.left}).bind("drag",function(f){a(f.offsetX+d,f.offsetY+c)}).bind("dragend",function(){workflow.fit_canvas_to_nodes();b.draw_overview()});this.ov.bind("drag",function(k){var j=b.cc.width(),g=b.cc.height(),f =b.oc.width(),h=b.oc.height(),i=$(this).offsetParent().offset(),m=k.offsetX-i.left,l=k.offsetY-i.top;a(-(m/f*j),-(l/h*g))}).bind("dragend",function(){workflow.fit_canvas_to_nodes();b.draw_overview()});$("#overview-border").bind("drag",function(g){var i=$(this).offsetParent();var h=i.offset();var f=Math.max(i.width()-(g.offsetX-h.left),i.height()-(g.offsetY-h.top));$(this).css({width:f,height:f});b.draw_overview()});$("#overview-border div").bind("drag",function(f){})},update_viewport_overlay:function(){var b=this.cc,f=this.cv,a=this.oc,c=this.ov,d=b.width(),j=b.height(),i=a.width(),g=a.height(),h=b.position();c.css({left:-(h.left/d*i),top:-(h.top/j*g),width:(f.width()/d*i)-2,height:(f.height()/j*g)-2})},draw_overview:function(){var j=$("#overview-canvas"),m=j.parent().parent().width(),i=j.get(0).getContext("2d"),d=$("#canvas-container").width(),l=$("#canvas-container").height();var g,a,k,f;var h=this.cv.width();var b=this.cv.height();if(d<h&&l<b){k=d/h*m;f=(m-k)/2;g=l/b*m;a= (m-g)/2}else{if(d<l){a=0;g=m;k=Math.ceil(g*d/l);f=(m-k)/2}else{k=m;f=0;g=Math.ceil(k*l/d);a=(m-g)/2}}j.parent().css({left:f,top:a,width:k,height:g});j.attr("width",k);j.attr("height",g);i.fillStyle="#D2C099";i.strokeStyle="#D8B365";i.lineWidth=1;$.each(workflow.nodes,function(t,q){var s=$(q.element),n=s.position(),c=n.left/d*k,r=n.top/l*g,o=s.width()/d*k,p=s.height()/l*g;i.fillRect(c,r,o,p);i.strokeRect(c,r,o,p)});this.update_viewport_overlay()}}); \ No newline at end of file diff -r 1e85451c9c86 -r 43249ea9d72a templates/workflow/editor.mako --- a/templates/workflow/editor.mako Wed Feb 17 11:07:08 2010 -0500 +++ b/templates/workflow/editor.mako Wed Feb 17 12:25:17 2010 -0500 @@ -26,7 +26,8 @@ <script type='text/javascript' src="${h.url_for('/static/scripts/excanvas.js')}"> </script> <![endif]--> - ${h.js( "jquery", + ${h.js( "jquery", + "jquery.tipsy", "jquery.event.drag", "jquery.event.drop", "jquery.event.hover", @@ -128,27 +129,27 @@ return false; }); - ## make_popupmenu( "#optionsbutton", { - ## "Create <b>new</b> workflow" : create_new_workflow_dialog, - ## "<b>Save</b> current workflow" : save_current_workflow, - ## "<b>Load</b> a stored workflow" : load_workflow - ## }); + make_popupmenu( $("#workflow-options-button"), { + ##"Create New" : create_new_workflow_dialog, + "Edit Attributes" : edit_workflow_attributes, + "Layout": layout_editor, + "Save" : save_current_workflow, + ##"Load a Workflow" : load_workflow, + "Close": close_editor, + }); - $("#save-button").click( function() { save_current_workflow(); } ); - $("#close-button").click( function() { close_editor(); } ); - - $("#layout-button").click( function() { + function layout_editor() { workflow.layout(); workflow.fit_canvas_to_nodes(); scroll_to_nodes(); canvas_manager.draw_overview(); - }); + }; - $('#edit-attributes-button').click( function() { + function edit_workflow_attributes() { workflow.clear_active_node(); $('#edit-attributes').show(); - $('#right-content').hide(); - }); + $('#right-content').hide(); + }; $.jStore.ready(function(engine) { engine.ready(function() { @@ -219,7 +220,7 @@ }); // Rename async. - async_save_text("workflow-rename", "workflow-name", "${h.url_for( action="rename_async", id=trans.security.encode_id(stored.id) )}", "new_name"); + async_save_text("workflow-name", "workflow-name", "${h.url_for( action="rename_async", id=trans.security.encode_id(stored.id) )}", "new_name"); // Tag async. Simply have the workflow edit element generate a click on the tag element to activate tagging. $('#workflow-tag').click( function() @@ -228,7 +229,7 @@ return false; }); // Annotate async. - async_save_text("workflow-annotate", "workflow-annotation", "${h.url_for( action="annotate_async", id=trans.security.encode_id(stored.id) )}", "new_annotation", true, 4); + async_save_text("workflow-annotation", "workflow-annotation", "${h.url_for( action="annotate_async", id=trans.security.encode_id(stored.id) )}", "new_annotation", 25, true, 4); }); // Global state for the whole workflow @@ -306,7 +307,7 @@ function show_form_for_tool( text, node ) { $("#edit-attributes").hide(); - $("#right-content").show().html( text ); + $("#right-content").show().html( text ); $("#right-content").find( "form" ).ajaxForm( { type: 'POST', dataType: 'json', @@ -337,17 +338,7 @@ $(this).remove(); make_popupmenu( b, options ); }); - // Add annotation field to form. - // TODO: need to set the annotation for this tool. - var annotation_div = - $( "<div class='form-row'> \ - <label>Annotation / Notes:</label> \ - <div style='margin-right: 10px;'> \ - <textarea name='annotation' rows='3' style='width: 100%'>" + node.annotation + "</textarea> \ - <div class='toolParamHelp'>Add an annotation or notes to this step; annotations are available when a workflow is viewed.</div> \ - </div> \ - </div>"); - $(this).append( annotation_div ); + // Implements auto-saving based on whether the inputs change. We consider // "changed" to be when a field is accessed and not necessarily modified // because of an issue where "onchange" is not triggered when activating @@ -358,6 +349,30 @@ }); }); }); + + + // Add metadata form to tool. + if ( node ) + { + var metadata_div = + $( "<p><div class='metadataForm'> \ + <div class='metadataFormTitle'>Edit Step Attributes</div> \ + <div class='form-row'> \ + <label>Annotation / Notes:</label> \ + <div style='margin-right: 10px;'> \ + <textarea name='annotation' rows='3' style='width: 100%'>" + node.annotation + "</textarea> \ + <div class='toolParamHelp'>Add an annotation or notes to this step; annotations are available when a workflow is viewed.</div> \ + </div> \ + </div> \ + </div>"); + // When metadata is changed, update node and set workflow changes flag. + var textarea = $(metadata_div).find("textarea"); + textarea.change( function () { + node.annotation = $(this).val(); + workflow.has_changes = true; + }); + $("#right-content").find(".toolForm").after( metadata_div ); + } } var close_editor = function() { @@ -373,7 +388,7 @@ { "Cancel" : hide_modal, "Save Changes" : function() { - save_current_workflow( do_close ); + save_current_workflow( null, do_close ); } }, { "Don't Save": do_close @@ -383,7 +398,7 @@ } } - var save_current_workflow = function ( success_callback ) { + var save_current_workflow = function ( eventObj, success_callback ) { show_modal( "Saving workflow", "progress" ); workflow.check_changes_in_active_form(); if (!workflow.has_changes) { @@ -739,13 +754,10 @@ <div class="unified-panel-header" unselectable="on"> <div class="unified-panel-header-inner" style="float: right"> - <a id="layout-button" class="panel-header-button">Layout</a> -    - <a id="save-button" class="panel-header-button">Save</a> - <a id="close-button" class="panel-header-button">Close</a> + <a id="workflow-options-button" class="panel-header-button popup" href="#">Options</a> </div> <div class="unified-panel-header-inner"> - Workflow canvas + Workflow Canvas | ${stored.name | h} </div> </div> @@ -770,22 +782,17 @@ <div class="unified-panel-header" unselectable="on"> <div class="unified-panel-header-inner"> Details - <div style="float: right"> - <a id="edit-attributes-button" class="panel-header-button">Edit Workflow Attributes</a> - </div> </div> </div> <div class="unified-panel-body" style="overflow: auto;"> ## Div for elements to modify workflow attributes. - <div id="edit-attributes" class="toolForm right-content"> - <div class="toolFormTitle">Edit Workflow Attributes</div> - <div class="toolFormBody"> + <div id="edit-attributes" class="metadataForm right-content"> + <div class="metadataFormTitle">Edit Workflow Attributes</div> + <div class="metadataFormBody"> ## Workflow name. <div id="workflow-name-area" class="form-row"> <label>Name:</label> - <div style="float: right"><a id="workflow-rename" title="Rename" class="icon-button edit" target="galaxy_main" href="${h.url_for( controller='workflow', action='rename_sync' )}"></a></div> - <div id="workflow-name">${stored.name | h}</div> - <div style="clear: both"></div> + <span id="workflow-name" class="tooltip editable-text" original-title="Click to rename workflow">${stored.name | h}</span> </div> ## Workflow tags. <%namespace file="/tagging_common.mako" import="render_individual_tagging_element" /> @@ -793,24 +800,20 @@ <label> Tags: </label> - <div style="float: right"><a id="workflow-tag" title="Tag" class="icon-button edit" target="galaxy_main" href="${h.url_for( controller='workflow', action='annotate_async' )}"></a></div> <div style="float: left; width: 225px; margin-right: 10px; border-style: inset; border-width: 1px; margin-left: 2px"> <style> .tag-area { border: none; } </style> - ${render_individual_tagging_element(user=trans.get_user(), tagged_item=stored, elt_context="edit_attributes.mako", use_toggle_link=False, input_size="20", render_add_tag_button=False)} + ${render_individual_tagging_element(user=trans.get_user(), tagged_item=stored, elt_context="edit_attributes.mako", use_toggle_link=False, input_size="20")} </div> - <div style="clear: both"></div> <div class="toolParamHelp">Apply tags to make it easy to search for and find items with the same tag.</div> </div> ## Workflow annotation. <div id="workflow-annotation-area" class="form-row"> <label>Annotation / Notes:</label> - <div style="float: right"><a id="workflow-annotate" title="Annotate" class="icon-button edit" target="galaxy_main" href="${h.url_for( controller='workflow', action='annotate_async' )}"></a></div> - <div id="workflow-annotation">${annotation | h}</div> - <div style="clear: both"></div> + <span id="workflow-annotation" class="tooltip editable-text" original-title="Click to edit annotation">${annotation | h}</span> <div class="toolParamHelp">Add an annotation or notes to a workflow; annotations are available when a workflow is viewed.</div> </div> </div>

1 0

[hg] galaxy 3404: Enhance functional test framework so that a bo...
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/1e85451c9c86 changeset: 3404:1e85451c9c86 user: Greg Von Kuster <greg(a)bx.psu.edu> date: Wed Feb 17 11:07:08 2010 -0500 description: Enhance functional test framework so that a boolean form field ( checkbox ) can have a false value ( be unchecked ). Add a 2nd test to gops_concat that uses this behavior. diffstat: test-data/gops-concat.dat | 133 ---------------------------------------- test-data/gops_concat_out1.bed | 133 ++++++++++++++++++++++++++++++++++++++++ test-data/gops_concat_out2.bed | 70 +++++++++++++++++++++ test/base/twilltestcase.py | 24 ++++++- tools/new_operations/concat.xml | 10 ++- 5 files changed, 233 insertions(+), 137 deletions(-) diffs (402 lines): diff -r 9047e03bfc7f -r 1e85451c9c86 test-data/gops-concat.dat --- a/test-data/gops-concat.dat Tue Feb 16 18:58:05 2010 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,133 +0,0 @@ -chr1 147962192 147962580 CCDS989.1_cds_0_0_chr1_147962193_r 0 - -chr1 147984545 147984630 CCDS990.1_cds_0_0_chr1_147984546_f 0 + -chr1 148078400 148078582 CCDS993.1_cds_0_0_chr1_148078401_r 0 - -chr1 148185136 148185276 CCDS996.1_cds_0_0_chr1_148185137_f 0 + -chr10 55251623 55253124 CCDS7248.1_cds_0_0_chr10_55251624_r 0 - -chr11 116124407 116124501 CCDS8374.1_cds_0_0_chr11_116124408_r 0 - -chr11 116206508 116206563 CCDS8377.1_cds_0_0_chr11_116206509_f 0 + -chr11 116211733 116212337 CCDS8378.1_cds_0_0_chr11_116211734_r 0 - -chr11 1812377 1812407 CCDS7726.1_cds_0_0_chr11_1812378_f 0 + -chr12 38440094 38440321 CCDS8736.1_cds_0_0_chr12_38440095_r 0 - -chr13 112381694 112381953 CCDS9526.1_cds_0_0_chr13_112381695_f 0 + -chr14 98710240 98712285 CCDS9949.1_cds_0_0_chr14_98710241_r 0 - -chr15 41486872 41487060 CCDS10096.1_cds_0_0_chr15_41486873_r 0 - -chr15 41673708 41673857 CCDS10097.1_cds_0_0_chr15_41673709_f 0 + -chr15 41679161 41679250 CCDS10098.1_cds_0_0_chr15_41679162_r 0 - -chr15 41826029 41826196 CCDS10101.1_cds_0_0_chr15_41826030_f 0 + -chr16 142908 143003 CCDS10397.1_cds_0_0_chr16_142909_f 0 + -chr16 179963 180135 CCDS10401.1_cds_0_0_chr16_179964_r 0 - -chr16 244413 244681 CCDS10402.1_cds_0_0_chr16_244414_f 0 + -chr16 259268 259383 CCDS10403.1_cds_0_0_chr16_259269_r 0 - -chr18 23786114 23786321 CCDS11891.1_cds_0_0_chr18_23786115_r 0 - -chr18 59406881 59407046 CCDS11985.1_cds_0_0_chr18_59406882_f 0 + -chr18 59455932 59456337 CCDS11986.1_cds_0_0_chr18_59455933_r 0 - 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for elem in control_value: - control.get( name=elem ).selected = True + if control.type == "checkbox": + def is_checked( value ): + # Copied from form_builder.CheckboxField + if value == True: + return True + if isinstance( value, basestring ) and value.lower() in ( "yes", "true", "on" ): + return True + # This may look strange upon initial inspection, but see the comments in the get_html() method + # above for clarification. Basically, if value is not True, then it will always be a list with + # 2 input fields ( a checkbox and a hidden field ) if the checkbox is checked. If it is not + # checked, then value will be only the hidden field. + return isinstance( value, list ) and len( value ) == 2 + try: + checkbox = control.get() + checkbox.selected = is_checked( control_value ) + except ClientForm.AmbiguityError: + # if there's more than one checkbox, use the behaviour for + # ClientForm.ListControl - see twill code.. + pass + else: + for elem in control_value: + control.get( name=elem ).selected = True else: # control.is_of_kind( "singlelist" ) for elem in control_value: tc.fv( f.name, control.name, str( elem ) ) diff -r 9047e03bfc7f -r 1e85451c9c86 tools/new_operations/concat.xml --- a/tools/new_operations/concat.xml Tue Feb 16 18:58:05 2010 -0500 +++ b/tools/new_operations/concat.xml Wed Feb 17 11:07:08 2010 -0500 @@ -20,8 +20,14 @@ <param name="input1" value="1.bed" /> <param name="input2" value="2.bed" /> <param name="sameformat" value="true" /> - <output name="output" file="gops-concat.dat" /> - </test> + <output name="output" file="gops_concat_out1.bed" /> + </test> + <test> + <param name="input1" value="1.bed" /> + <param name="input2" value="1.interval" /> + <param name="sameformat" value="false" /> + <output name="output" file="gops_concat_out2.bed" /> + </test> </tests> <help>

1 0

[hg] galaxy 3403: Code cleanup and script packing.
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/9047e03bfc7f changeset: 3403:9047e03bfc7f user: jeremy goecks <jeremy.goecks(a)emory.edu> date: Tue Feb 16 18:58:05 2010 -0500 description: Code cleanup and script packing. diffstat: static/scripts/packed/jquery.js | 4365 ++++++++++++++++++++++++++++++++++++++- templates/display_base.mako | 16 +- 2 files changed, 4369 insertions(+), 12 deletions(-) diffs (truncated from 4408 to 3000 lines): diff -r bb50ac713feb -r 9047e03bfc7f static/scripts/packed/jquery.js --- a/static/scripts/packed/jquery.js Tue Feb 16 17:05:12 2010 -0500 +++ b/static/scripts/packed/jquery.js Tue Feb 16 18:58:05 2010 -0500 @@ -1,4 +1,4 @@ -/* +/*! * jQuery JavaScript Library v1.3.2 * http://jquery.com/ * @@ -9,11 +9,4368 @@ * Date: 2009-02-19 17:34:21 -0500 (Thu, 19 Feb 2009) * Revision: 6246 */ -(function(){var l=this,g,y=l.jQuery,p=l.$,o=l.jQuery=l.$=function(E,F){return new o.fn.init(E,F)},D=/^[^<]*(<(.|\s)+>)[^>]*$|^#([\w-]+)$/,f=/^.[^:#\[\.,]*$/;o.fn=o.prototype={init:function(E,H){E=E||document;if(E.nodeType){this[0]=E;this.length=1;this.context=E;return this}if(typeof E==="string"){var G=D.exec(E);if(G&&(G[1]||!H)){if(G[1]){E=o.clean([G[1]],H)}else{var I=document.getElementById(G[3]);if(I&&I.id!=G[3]){return o().find(E)}var F=o(I||[]);F.context=document;F.selector=E;return F}}else{return o(H).find(E)}}else{if(o.isFunction(E)){return o(document).ready(E)}}if(E.selector&&E.context){this.selector=E.selector;this.context=E.context}return this.setArray(o.isArray(E)?E:o.makeArray(E))},selector:"",jquery:"1.3.2",size:function(){return this.length},get:function(E){return E===g?Array.prototype.slice.call(this):this[E]},pushStack:function(F,H,E){var G=o(F);G.prevObject=this;G.context=this.context;if(H==="find"){G.selector=this.selector+(this.selector?" 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/^[^<]*(<(.|\s)+>)[^>]*$|^#([\w-]+)$/, + // Is it a simple selector + isSimple = /^.[^:#\[\.,]*$/; + +jQuery.fn = jQuery.prototype = { + init: function( selector, context ) { + // Make sure that a selection was provided + selector = selector || document; + + // Handle $(DOMElement) + if ( selector.nodeType ) { + this[0] = selector; + this.length = 1; + this.context = selector; + return this; + } + // Handle HTML strings + if ( typeof selector === "string" ) { + // Are we dealing with HTML string or an ID? + var match = quickExpr.exec( selector ); + + // Verify a match, and that no context was specified for #id + if ( match && (match[1] || !context) ) { + + // HANDLE: $(html) -> $(array) + if ( match[1] ) + selector = jQuery.clean( [ match[1] ], context ); + + // HANDLE: $("#id") + else { + var elem = document.getElementById( match[3] ); + + // Handle the case where IE and Opera return items + // by name instead of ID + if ( elem && elem.id != match[3] ) + return jQuery().find( selector ); + + // Otherwise, we inject the element directly into the jQuery object + var ret = jQuery( elem || [] ); + ret.context = document; + ret.selector = selector; + return ret; + } + + // HANDLE: $(expr, [context]) + // (which is just equivalent to: $(content).find(expr) + } else + return jQuery( context ).find( selector ); + + // HANDLE: $(function) + // Shortcut for document ready + } else if ( jQuery.isFunction( selector ) ) + return jQuery( document ).ready( selector ); + + // Make sure that old selector state is passed along + if ( selector.selector && selector.context ) { + this.selector = selector.selector; + this.context = selector.context; + } + + return this.setArray(jQuery.isArray( selector ) ? + selector : + jQuery.makeArray(selector)); + }, + + // Start with an empty selector + selector: "", + + // The current version of jQuery being used + jquery: "1.3.2", + + // The number of elements contained in the matched element set + size: function() { + return this.length; + }, + + // Get the Nth element in the matched element set OR + // Get the whole matched element set as a clean array + get: function( num ) { + return num === undefined ? + + // Return a 'clean' array + Array.prototype.slice.call( this ) : + + // Return just the object + this[ num ]; + }, + + // Take an array of elements and push it onto the stack + // (returning the new matched element set) + pushStack: function( elems, name, selector ) { + // Build a new jQuery matched element set + var ret = jQuery( elems ); + + // Add the old object onto the stack (as a reference) + ret.prevObject = this; + + ret.context = this.context; + + if ( name === "find" ) + ret.selector = this.selector + (this.selector ? " " : "") + selector; + else if ( name ) + ret.selector = this.selector + "." + name + "(" + selector + ")"; + + // Return the newly-formed element set + return ret; + }, + + // Force the current matched set of elements to become + // the specified array of elements (destroying the stack in the process) + // You should use pushStack() in order to do this, but maintain the stack + setArray: function( elems ) { + // Resetting the length to 0, then using the native Array push + // is a super-fast way to populate an object with array-like properties + this.length = 0; + Array.prototype.push.apply( this, elems ); + + return this; + }, + + // Execute a callback for every element in the matched set. + // (You can seed the arguments with an array of args, but this is + // only used internally.) + each: function( callback, args ) { + return jQuery.each( this, callback, args ); + }, + + // Determine the position of an element within + // the matched set of elements + index: function( elem ) { + // Locate the position of the desired element + return jQuery.inArray( + // If it receives a jQuery object, the first element is used + elem && elem.jquery ? elem[0] : elem + , this ); + }, + + attr: function( name, value, type ) { + var options = name; + + // Look for the case where we're accessing a style value + if ( typeof name === "string" ) + if ( value === undefined ) + return this[0] && jQuery[ type || "attr" ]( this[0], name ); + + else { + options = {}; + options[ name ] = value; + } + + // Check to see if we're setting style values + return this.each(function(i){ + // Set all the styles + for ( name in options ) + jQuery.attr( + type ? + this.style : + this, + name, jQuery.prop( this, options[ name ], type, i, name ) + ); + }); + }, + + css: function( key, value ) { + // ignore negative width and height values + if ( (key == 'width' || key == 'height') && parseFloat(value) < 0 ) + value = undefined; + return this.attr( key, value, "curCSS" ); + }, + + text: function( text ) { + if ( typeof text !== "object" && text != null ) + return this.empty().append( (this[0] && this[0].ownerDocument || document).createTextNode( text ) ); + + var ret = ""; + + jQuery.each( text || this, function(){ + jQuery.each( this.childNodes, function(){ + if ( this.nodeType != 8 ) + ret += this.nodeType != 1 ? + this.nodeValue : + jQuery.fn.text( [ this ] ); + }); + }); + + return ret; + }, + + wrapAll: function( html ) { + if ( this[0] ) { + // The elements to wrap the target around + var wrap = jQuery( html, this[0].ownerDocument ).clone(); + + if ( this[0].parentNode ) + wrap.insertBefore( this[0] ); + + wrap.map(function(){ + var elem = this; + + while ( elem.firstChild ) + elem = elem.firstChild; + + return elem; + }).append(this); + } + + return this; + }, + + wrapInner: function( html ) { + return this.each(function(){ + jQuery( this ).contents().wrapAll( html ); + }); + }, + + wrap: function( html ) { + return this.each(function(){ + jQuery( this ).wrapAll( html ); + }); + }, + + append: function() { + return this.domManip(arguments, true, function(elem){ + if (this.nodeType == 1) + this.appendChild( elem ); + }); + }, + + prepend: function() { + return this.domManip(arguments, true, function(elem){ + if (this.nodeType == 1) + this.insertBefore( elem, this.firstChild ); + }); + }, + + before: function() { + return this.domManip(arguments, false, function(elem){ + this.parentNode.insertBefore( elem, this ); + }); + }, + + after: function() { + return this.domManip(arguments, false, function(elem){ + this.parentNode.insertBefore( elem, this.nextSibling ); + }); + }, + + end: function() { + return this.prevObject || jQuery( [] ); + }, + + // For internal use only. + // Behaves like an Array's method, not like a jQuery method. + push: [].push, + sort: [].sort, + splice: [].splice, + + find: function( selector ) { + if ( this.length === 1 ) { + var ret = this.pushStack( [], "find", selector ); + ret.length = 0; + jQuery.find( selector, this[0], ret ); + return ret; + } else { + return this.pushStack( jQuery.unique(jQuery.map(this, function(elem){ + return jQuery.find( selector, elem ); + })), "find", selector ); + } + }, + + clone: function( events ) { + // Do the clone + var ret = this.map(function(){ + if ( !jQuery.support.noCloneEvent && !jQuery.isXMLDoc(this) ) { + // IE copies events bound via attachEvent when + // using cloneNode. Calling detachEvent on the + // clone will also remove the events from the orignal + // In order to get around this, we use innerHTML. + // Unfortunately, this means some modifications to + // attributes in IE that are actually only stored + // as properties will not be copied (such as the + // the name attribute on an input). + var html = this.outerHTML; + if ( !html ) { + var div = this.ownerDocument.createElement("div"); + div.appendChild( this.cloneNode(true) ); + html = div.innerHTML; + } + + return jQuery.clean([html.replace(/ jQuery\d+="(?:\d+|null)"/g, "").replace(/^\s*/, "")])[0]; + } else + return this.cloneNode(true); + }); + + // Copy the events from the original to the clone + if ( events === true ) { + var orig = this.find("*").andSelf(), i = 0; + + ret.find("*").andSelf().each(function(){ + if ( this.nodeName !== orig[i].nodeName ) + return; + + var events = jQuery.data( orig[i], "events" ); + + for ( var type in events ) { + for ( var handler in events[ type ] ) { + jQuery.event.add( this, type, events[ type ][ handler ], events[ type ][ handler ].data ); + } + } + + i++; + }); + } + + // Return the cloned set + return ret; + }, + + filter: function( selector ) { + return this.pushStack( + jQuery.isFunction( selector ) && + jQuery.grep(this, function(elem, i){ + return selector.call( elem, i ); + }) || + + jQuery.multiFilter( selector, jQuery.grep(this, function(elem){ + return elem.nodeType === 1; + }) ), "filter", selector ); + }, + + closest: function( selector ) { + var pos = jQuery.expr.match.POS.test( selector ) ? jQuery(selector) : null, + closer = 0; + + return this.map(function(){ + var cur = this; + while ( cur && cur.ownerDocument ) { + if ( pos ? pos.index(cur) > -1 : jQuery(cur).is(selector) ) { + jQuery.data(cur, "closest", closer); + return cur; + } + cur = cur.parentNode; + closer++; + } + }); + }, + + not: function( selector ) { + if ( typeof selector === "string" ) + // test special case where just one selector is passed in + if ( isSimple.test( selector ) ) + return this.pushStack( jQuery.multiFilter( selector, this, true ), "not", selector ); + else + selector = jQuery.multiFilter( selector, this ); + + var isArrayLike = selector.length && selector[selector.length - 1] !== undefined && !selector.nodeType; + return this.filter(function() { + return isArrayLike ? jQuery.inArray( this, selector ) < 0 : this != selector; + }); + }, + + add: function( selector ) { + return this.pushStack( jQuery.unique( jQuery.merge( + this.get(), + typeof selector === "string" ? + jQuery( selector ) : + jQuery.makeArray( selector ) + ))); + }, + + is: function( selector ) { + return !!selector && jQuery.multiFilter( selector, this ).length > 0; + }, + + hasClass: function( selector ) { + return !!selector && this.is( "." + selector ); + }, + + val: function( value ) { + if ( value === undefined ) { + var elem = this[0]; + + if ( elem ) { + if( jQuery.nodeName( elem, 'option' ) ) + return (elem.attributes.value || {}).specified ? elem.value : elem.text; + + // We need to handle select boxes special + if ( jQuery.nodeName( elem, "select" ) ) { + var index = elem.selectedIndex, + values = [], + options = elem.options, + one = elem.type == "select-one"; + + // Nothing was selected + if ( index < 0 ) + return null; + + // Loop through all the selected options + for ( var i = one ? index : 0, max = one ? index + 1 : options.length; i < max; i++ ) { + var option = options[ i ]; + + if ( option.selected ) { + // Get the specifc value for the option + value = jQuery(option).val(); + + // We don't need an array for one selects + if ( one ) + return value; + + // Multi-Selects return an array + values.push( value ); + } + } + + return values; + } + + // Everything else, we just grab the value + return (elem.value || "").replace(/\r/g, ""); + + } + + return undefined; + } + + if ( typeof value === "number" ) + value += ''; + + return this.each(function(){ + if ( this.nodeType != 1 ) + return; + + if ( jQuery.isArray(value) && /radio|checkbox/.test( this.type ) ) + this.checked = (jQuery.inArray(this.value, value) >= 0 || + jQuery.inArray(this.name, value) >= 0); + + else if ( jQuery.nodeName( this, "select" ) ) { + var values = jQuery.makeArray(value); + + jQuery( "option", this ).each(function(){ + this.selected = (jQuery.inArray( this.value, values ) >= 0 || + jQuery.inArray( this.text, values ) >= 0); + }); + + if ( !values.length ) + this.selectedIndex = -1; + + } else + this.value = value; + }); + }, + + html: function( value ) { + return value === undefined ? + (this[0] ? + this[0].innerHTML.replace(/ jQuery\d+="(?:\d+|null)"/g, "") : + null) : + this.empty().append( value ); + }, + + replaceWith: function( value ) { + return this.after( value ).remove(); + }, + + eq: function( i ) { + return this.slice( i, +i + 1 ); + }, + + slice: function() { + return this.pushStack( Array.prototype.slice.apply( this, arguments ), + "slice", Array.prototype.slice.call(arguments).join(",") ); + }, + + map: function( callback ) { + return this.pushStack( jQuery.map(this, function(elem, i){ + return callback.call( elem, i, elem ); + })); + }, + + andSelf: function() { + return this.add( this.prevObject ); + }, + + domManip: function( args, table, callback ) { + if ( this[0] ) { + var fragment = (this[0].ownerDocument || this[0]).createDocumentFragment(), + scripts = jQuery.clean( args, (this[0].ownerDocument || this[0]), fragment ), + first = fragment.firstChild; + + if ( first ) + for ( var i = 0, l = this.length; i < l; i++ ) + callback.call( root(this[i], first), this.length > 1 || i > 0 ? + fragment.cloneNode(true) : fragment ); + + if ( scripts ) + jQuery.each( scripts, evalScript ); + } + + return this; + + function root( elem, cur ) { + return table && jQuery.nodeName(elem, "table") && jQuery.nodeName(cur, "tr") ? + (elem.getElementsByTagName("tbody")[0] || + elem.appendChild(elem.ownerDocument.createElement("tbody"))) : + elem; + } + } +}; + +// Give the init function the jQuery prototype for later instantiation +jQuery.fn.init.prototype = jQuery.fn; + +function evalScript( i, elem ) { + if ( elem.src ) + jQuery.ajax({ + url: elem.src, + async: false, + dataType: "script" + }); + + else + jQuery.globalEval( elem.text || elem.textContent || elem.innerHTML || "" ); + + if ( elem.parentNode ) + elem.parentNode.removeChild( elem ); +} + +function now(){ + return +new Date; +} + +jQuery.extend = jQuery.fn.extend = function() { + // copy reference to target object + var target = arguments[0] || {}, i = 1, length = arguments.length, deep = false, options; + + // Handle a deep copy situation + if ( typeof target === "boolean" ) { + deep = target; + target = arguments[1] || {}; + // skip the boolean and the target + i = 2; + } + + // Handle case when target is a string or something (possible in deep copy) + if ( typeof target !== "object" && !jQuery.isFunction(target) ) + target = {}; + + // extend jQuery itself if only one argument is passed + if ( length == i ) { + target = this; + --i; + } + + for ( ; i < length; i++ ) + // Only deal with non-null/undefined values + if ( (options = arguments[ i ]) != null ) + // Extend the base object + for ( var name in options ) { + var src = target[ name ], copy = options[ name ]; + + // Prevent never-ending loop + if ( target === copy ) + continue; + + // Recurse if we're merging object values + if ( deep && copy && typeof copy === "object" && !copy.nodeType ) + target[ name ] = jQuery.extend( deep, + // Never move original objects, clone them + src || ( copy.length != null ? [ ] : { } ) + , copy ); + + // Don't bring in undefined values + else if ( copy !== undefined ) + target[ name ] = copy; + + } + + // Return the modified object + return target; +}; + +// exclude the following css properties to add px +var exclude = /z-?index|font-?weight|opacity|zoom|line-?height/i, + // cache defaultView + defaultView = document.defaultView || {}, + toString = Object.prototype.toString; + +jQuery.extend({ + noConflict: function( deep ) { + window.$ = _$; + + if ( deep ) + window.jQuery = _jQuery; + + return jQuery; + }, + + // See test/unit/core.js for details concerning isFunction. + // Since version 1.3, DOM methods and functions like alert + // aren't supported. They return false on IE (#2968). + isFunction: function( obj ) { + return toString.call(obj) === "[object Function]"; + }, + + isArray: function( obj ) { + return toString.call(obj) === "[object Array]"; + }, + + // check if an element is in a (or is an) XML document + isXMLDoc: function( elem ) { + return elem.nodeType === 9 && elem.documentElement.nodeName !== "HTML" || + !!elem.ownerDocument && jQuery.isXMLDoc( elem.ownerDocument ); + }, + + // Evalulates a script in a global context + globalEval: function( data ) { + if ( data && /\S/.test(data) ) { + // Inspired by code by Andrea Giammarchi + // http://webreflection.blogspot.com/2007/08/global-scope-evaluation-and-dom.h… + var head = document.getElementsByTagName("head")[0] || document.documentElement, + script = document.createElement("script"); + + script.type = "text/javascript"; + if ( jQuery.support.scriptEval ) + script.appendChild( document.createTextNode( data ) ); + else + script.text = data; + + // Use insertBefore instead of appendChild to circumvent an IE6 bug. + // This arises when a base node is used (#2709). + head.insertBefore( script, head.firstChild ); + head.removeChild( script ); + } + }, + + nodeName: function( elem, name ) { + return elem.nodeName && elem.nodeName.toUpperCase() == name.toUpperCase(); + }, + + // args is for internal usage only + each: function( object, callback, args ) { + var name, i = 0, length = object.length; + + if ( args ) { + if ( length === undefined ) { + for ( name in object ) + if ( callback.apply( object[ name ], args ) === false ) + break; + } else + for ( ; i < length; ) + if ( callback.apply( object[ i++ ], args ) === false ) + break; + + // A special, fast, case for the most common use of each + } else { + if ( length === undefined ) { + for ( name in object ) + if ( callback.call( object[ name ], name, object[ name ] ) === false ) + break; + } else + for ( var value = object[0]; + i < length && callback.call( value, i, value ) !== false; value = object[++i] ){} + } + + return object; + }, + + prop: function( elem, value, type, i, name ) { + // Handle executable functions + if ( jQuery.isFunction( value ) ) + value = value.call( elem, i ); + + // Handle passing in a number to a CSS property + return typeof value === "number" && type == "curCSS" && !exclude.test( name ) ? + value + "px" : + value; + }, + + className: { + // internal only, use addClass("class") + add: function( elem, classNames ) { + jQuery.each((classNames || "").split(/\s+/), function(i, className){ + if ( elem.nodeType == 1 && !jQuery.className.has( elem.className, className ) ) + elem.className += (elem.className ? " " : "") + className; + }); + }, + + // internal only, use removeClass("class") + remove: function( elem, classNames ) { + if (elem.nodeType == 1) + elem.className = classNames !== undefined ? + jQuery.grep(elem.className.split(/\s+/), function(className){ + return !jQuery.className.has( classNames, className ); + }).join(" ") : + ""; + }, + + // internal only, use hasClass("class") + has: function( elem, className ) { + return elem && jQuery.inArray( className, (elem.className || elem).toString().split(/\s+/) ) > -1; + } + }, + + // A method for quickly swapping in/out CSS properties to get correct calculations + swap: function( elem, options, callback ) { + var old = {}; + // Remember the old values, and insert the new ones + for ( var name in options ) { + old[ name ] = elem.style[ name ]; + elem.style[ name ] = options[ name ]; + } + + callback.call( elem ); + + // Revert the old values + for ( var name in options ) + elem.style[ name ] = old[ name ]; + }, + + css: function( elem, name, force, extra ) { + if ( name == "width" || name == "height" ) { + var val, props = { position: "absolute", visibility: "hidden", display:"block" }, which = name == "width" ? [ "Left", "Right" ] : [ "Top", "Bottom" ]; + + function getWH() { + val = name == "width" ? elem.offsetWidth : elem.offsetHeight; + + if ( extra === "border" ) + return; + + jQuery.each( which, function() { + if ( !extra ) + val -= parseFloat(jQuery.curCSS( elem, "padding" + this, true)) || 0; + if ( extra === "margin" ) + val += parseFloat(jQuery.curCSS( elem, "margin" + this, true)) || 0; + else + val -= parseFloat(jQuery.curCSS( elem, "border" + this + "Width", true)) || 0; + }); + } + + if ( elem.offsetWidth !== 0 ) + getWH(); + else + jQuery.swap( elem, props, getWH ); + + return Math.max(0, Math.round(val)); + } + + return jQuery.curCSS( elem, name, force ); + }, + + curCSS: function( elem, name, force ) { + var ret, style = elem.style; + + // We need to handle opacity special in IE + if ( name == "opacity" && !jQuery.support.opacity ) { + ret = jQuery.attr( style, "opacity" ); + + return ret == "" ? + "1" : + ret; + } + + // Make sure we're using the right name for getting the float value + if ( name.match( /float/i ) ) + name = styleFloat; + + if ( !force && style && style[ name ] ) + ret = style[ name ]; + + else if ( defaultView.getComputedStyle ) { + + // Only "float" is needed here + if ( name.match( /float/i ) ) + name = "float"; + + name = name.replace( /([A-Z])/g, "-$1" ).toLowerCase(); + + var computedStyle = defaultView.getComputedStyle( elem, null ); + + if ( computedStyle ) + ret = computedStyle.getPropertyValue( name ); + + // We should always get a number back from opacity + if ( name == "opacity" && ret == "" ) + ret = "1"; + + } else if ( elem.currentStyle ) { + var camelCase = name.replace(/\-(\w)/g, function(all, letter){ + return letter.toUpperCase(); + }); + + ret = elem.currentStyle[ name ] || elem.currentStyle[ camelCase ]; + + // From the awesome hack by Dean Edwards + // http://erik.eae.net/archives/2007/07/27/18.54.15/#comment-102291 + + // If we're not dealing with a regular pixel number + // but a number that has a weird ending, we need to convert it to pixels + if ( !/^\d+(px)?$/i.test( ret ) && /^\d/.test( ret ) ) { + // Remember the original values + var left = style.left, rsLeft = elem.runtimeStyle.left; + + // Put in the new values to get a computed value out + elem.runtimeStyle.left = elem.currentStyle.left; + style.left = ret || 0; + ret = style.pixelLeft + "px"; + + // Revert the changed values + style.left = left; + elem.runtimeStyle.left = rsLeft; + } + } + + return ret; + }, + + clean: function( elems, context, fragment ) { + context = context || document; + + // !context.createElement fails in IE with an error but returns typeof 'object' + if ( typeof context.createElement === "undefined" ) + context = context.ownerDocument || context[0] && context[0].ownerDocument || document; + + // If a single string is passed in and it's a single tag + // just do a createElement and skip the rest + if ( !fragment && elems.length === 1 && typeof elems[0] === "string" ) { + var match = /^<(\w+)\s*\/?>$/.exec(elems[0]); + if ( match ) + return [ context.createElement( match[1] ) ]; + } + + var ret = [], scripts = [], div = context.createElement("div"); + + jQuery.each(elems, function(i, elem){ + if ( typeof elem === "number" ) + elem += ''; + + if ( !elem ) + return; + + // Convert html string into DOM nodes + if ( typeof elem === "string" ) { + // Fix "XHTML"-style tags in all browsers + elem = elem.replace(/(<(\w+)[^>]*?)\/>/g, function(all, front, tag){ + return tag.match(/^(abbr|br|col|img|input|link|meta|param|hr|area|embed)$/i) ? + all : + front + "></" + tag + ">"; + }); + + // Trim whitespace, otherwise indexOf won't work as expected + var tags = elem.replace(/^\s+/, "").substring(0, 10).toLowerCase(); + + var wrap = + // option or optgroup + !tags.indexOf("<opt") && + [ 1, "<select multiple='multiple'>", "</select>" ] || + + !tags.indexOf("<leg") && + [ 1, "<fieldset>", "</fieldset>" ] || + + tags.match(/^<(thead|tbody|tfoot|colg|cap)/) && + [ 1, "<table>", "</table>" ] || + + !tags.indexOf("<tr") && + [ 2, "<table><tbody>", "</tbody></table>" ] || + + // <thead> matched above + (!tags.indexOf("<td") || !tags.indexOf("<th")) && + [ 3, "<table><tbody><tr>", "</tr></tbody></table>" ] || + + !tags.indexOf("<col") && + [ 2, "<table><tbody></tbody><colgroup>", "</colgroup></table>" ] || + + // IE can't serialize <link> and <script> tags normally + !jQuery.support.htmlSerialize && + [ 1, "div<div>", "</div>" ] || + + [ 0, "", "" ]; + + // Go to html and back, then peel off extra wrappers + div.innerHTML = wrap[1] + elem + wrap[2]; + + // Move to the right depth + while ( wrap[0]-- ) + div = div.lastChild; + + // Remove IE's autoinserted <tbody> from table fragments + if ( !jQuery.support.tbody ) { + + // String was a <table>, *may* have spurious <tbody> + var hasBody = /<tbody/i.test(elem), + tbody = !tags.indexOf("<table") && !hasBody ? 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this.clone(true) : this).get(); + jQuery.fn[ original ].apply( jQuery(insert[i]), elems ); + ret = ret.concat( elems ); + } + + return this.pushStack( ret, name, selector ); + }; +}); + +jQuery.each({ + removeAttr: function( name ) { + jQuery.attr( this, name, "" ); + if (this.nodeType == 1) + this.removeAttribute( name ); + }, + + addClass: function( classNames ) { + jQuery.className.add( this, classNames ); + }, + + removeClass: function( classNames ) { + jQuery.className.remove( this, classNames ); + }, + + toggleClass: function( classNames, state ) { + if( typeof state !== "boolean" ) + state = !jQuery.className.has( this, classNames ); + jQuery.className[ state ? 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fset"+G]):K===g?(this.length?o.css(this[0],J):null):this.css(J,typeof K==="string"?K:K+"px")}})})(); \ No newline at end of file +(function(){ + +var chunker = /((?:$(?:\([^()]+$|[^()]+)+\)|\[(?:\[[^[\]]*\]|['"][^'"]*['"]|[^[\]'"]+)+\]|\\.|[^ >+~,(\[\\]+)+|[>+~])(\s*,\s*)?/g, + done = 0, + toString = Object.prototype.toString; + +var Sizzle = function(selector, context, results, seed) { + results = results || []; + context = context || document; + + if ( context.nodeType !== 1 && context.nodeType !== 9 ) + return []; + + if ( !selector || typeof selector !== "string" ) { + return results; + } + + var parts = [], m, set, checkSet, check, mode, extra, prune = true; + + // Reset the position of the chunker regexp (start from head) + chunker.lastIndex = 0; + + while ( (m = chunker.exec(selector)) !== null ) { + parts.push( m[1] ); + + if ( m[2] ) { + extra = RegExp.rightContext; + break; + } + } + + if ( parts.length > 1 && origPOS.exec( selector ) ) { + if ( parts.length === 2 && Expr.relative[ parts[0] ] ) { + set = posProcess( parts[0] + parts[1], context ); + } else { + set = Expr.relative[ parts[0] ] ? + [ context ] : + Sizzle( parts.shift(), context ); + + while ( parts.length ) { + selector = parts.shift(); + + if ( Expr.relative[ selector ] ) + selector += parts.shift(); + + set = posProcess( selector, set ); + } + } + } else { + var ret = seed ? + { expr: parts.pop(), set: makeArray(seed) } : + Sizzle.find( parts.pop(), parts.length === 1 && context.parentNode ? context.parentNode : context, isXML(context) ); + set = Sizzle.filter( ret.expr, ret.set ); + + if ( parts.length > 0 ) { + checkSet = makeArray(set); + } else { + prune = false; + } + + while ( parts.length ) { + var cur = parts.pop(), pop = cur; + + if ( !Expr.relative[ cur ] ) { + cur = ""; + } else { + pop = parts.pop(); + } + + if ( pop == null ) { + pop = context; + } + + Expr.relative[ cur ]( checkSet, pop, isXML(context) ); + } + } + + if ( !checkSet ) { + checkSet = set; + } + + if ( !checkSet ) { + throw "Syntax error, unrecognized expression: " + (cur || selector); + } + + if ( toString.call(checkSet) === "[object Array]" ) { + if ( !prune ) { + results.push.apply( results, checkSet ); + } else if ( context.nodeType === 1 ) { + for ( var i = 0; checkSet[i] != null; i++ ) { + if ( checkSet[i] && (checkSet[i] === true || checkSet[i].nodeType === 1 && contains(context, checkSet[i])) ) { + results.push( set[i] ); + } + } + } else { + for ( var i = 0; checkSet[i] != null; i++ ) { + if ( checkSet[i] && checkSet[i].nodeType === 1 ) { + results.push( set[i] ); + } + } + } + } else { + makeArray( checkSet, results ); + } + + if ( extra ) { + Sizzle( extra, context, results, seed ); + + if ( sortOrder ) { + hasDuplicate = false; + results.sort(sortOrder); + + if ( hasDuplicate ) { + for ( var i = 1; i < results.length; i++ ) { + if ( results[i] === results[i-1] ) { + results.splice(i--, 1); + } + } + } + } + } + + return results; +}; + +Sizzle.matches = function(expr, set){ + return Sizzle(expr, null, null, set); +}; + +Sizzle.find = function(expr, context, isXML){ + var set, match; + + if ( !expr ) { + return []; + } + + for ( var i = 0, l = Expr.order.length; i < l; i++ ) { + var type = Expr.order[i], match; + + if ( (match = Expr.match[ type ].exec( expr )) ) { + var left = RegExp.leftContext; + + if ( left.substr( left.length - 1 ) !== "\\" ) { + match[1] = (match[1] || "").replace(/\\/g, ""); + set = Expr.find[ type ]( match, context, isXML ); + if ( set != null ) { + expr = expr.replace( Expr.match[ type ], "" ); + break; + } + } + } + } + + if ( !set ) { + set = context.getElementsByTagName("*"); + } + + return {set: set, expr: expr}; +}; + +Sizzle.filter = function(expr, set, inplace, not){ + var old = expr, result = [], curLoop = set, match, anyFound, + isXMLFilter = set && set[0] && isXML(set[0]); + + while ( expr && set.length ) { + for ( var type in Expr.filter ) { + if ( (match = Expr.match[ type ].exec( expr )) != null ) { + var filter = Expr.filter[ type ], found, item; + anyFound = false; + + if ( curLoop == result ) { + result = []; + } + + if ( Expr.preFilter[ type ] ) { + match = Expr.preFilter[ type ]( match, curLoop, inplace, result, not, isXMLFilter ); + + if ( !match ) { + anyFound = found = true; + } else if ( match === true ) { + continue; + } + } + + if ( match ) { + for ( var i = 0; (item = curLoop[i]) != null; i++ ) { + if ( item ) { + found = filter( item, match, i, curLoop ); + var pass = not ^ !!found; + + if ( inplace && found != null ) { + if ( pass ) { + anyFound = true; + } else { + curLoop[i] = false; + } + } else if ( pass ) { + result.push( item ); + anyFound = true; + } + } + } + } + + if ( found !== undefined ) { + if ( !inplace ) { + curLoop = result; + } + + expr = expr.replace( Expr.match[ type ], "" ); + + if ( !anyFound ) { + return []; + } + + break; + } + } + } + + // Improper expression + if ( expr == old ) { + if ( anyFound == null ) { + throw "Syntax error, unrecognized expression: " + expr; + } else { + break; + } + } + + old = expr; + } + + return curLoop; +}; + +var Expr = Sizzle.selectors = { + order: [ "ID", "NAME", "TAG" ], + match: { + ID: /#((?:[\w\u00c0-\uFFFF_-]|\\.)+)/, + CLASS: /\.((?:[\w\u00c0-\uFFFF_-]|\\.)+)/, + NAME: /\[name=['"]*((?:[\w\u00c0-\uFFFF_-]|\\.)+)['"]*\]/, + ATTR: /\[\s*((?:[\w\u00c0-\uFFFF_-]|\\.)+)\s*(?:(\S?=)\s*(['"]*)(.*?)\3|)\s*\]/, + TAG: /^((?:[\w\u00c0-\uFFFF\*_-]|\\.)+)/, + CHILD: /:(only|nth|last|first)-child(?:$(even|odd|[\dn+-]*)$)?/, + POS: /:(nth|eq|gt|lt|first|last|even|odd)(?:$(\d*)$)?(?=[^-]|$)/, + PSEUDO: /:((?:[\w\u00c0-\uFFFF_-]|\\.)+)(?:$(['"]*)((?:\([^$]+\)|[^\2]*)+)\2\))?/ + }, + attrMap: { + "class": "className", + "for": "htmlFor" + }, + attrHandle: { + href: function(elem){ + return elem.getAttribute("href"); + } + }, + relative: { + "+": function(checkSet, part, isXML){ + var isPartStr = typeof part === "string", + isTag = isPartStr && !/\W/.test(part), + isPartStrNotTag = isPartStr && !isTag; + + if ( isTag && !isXML ) { + part = part.toUpperCase(); + } + + for ( var i = 0, l = checkSet.length, elem; i < l; i++ ) { + if ( (elem = checkSet[i]) ) { + while ( (elem = elem.previousSibling) && elem.nodeType !== 1 ) {} + + checkSet[i] = isPartStrNotTag || elem && elem.nodeName === part ? + elem || false : + elem === part; + } + } + + if ( isPartStrNotTag ) { + Sizzle.filter( part, checkSet, true ); + } + }, + ">": function(checkSet, part, isXML){ + var isPartStr = typeof part === "string"; + + if ( isPartStr && !/\W/.test(part) ) { + part = isXML ? part : part.toUpperCase(); + + for ( var i = 0, l = checkSet.length; i < l; i++ ) { + var elem = checkSet[i]; + if ( elem ) { + var parent = elem.parentNode; + checkSet[i] = parent.nodeName === part ? parent : false; + } + } + } else { + for ( var i = 0, l = checkSet.length; i < l; i++ ) { + var elem = checkSet[i]; + if ( elem ) { + checkSet[i] = isPartStr ? + elem.parentNode : + elem.parentNode === part; + } + } + + if ( isPartStr ) { + Sizzle.filter( part, checkSet, true ); + } + } + }, + "": function(checkSet, part, isXML){ + var doneName = done++, checkFn = dirCheck; + + if ( !part.match(/\W/) ) { + var nodeCheck = part = isXML ? part : part.toUpperCase(); + checkFn = dirNodeCheck; + } + + checkFn("parentNode", part, doneName, checkSet, nodeCheck, isXML); + }, + "~": function(checkSet, part, isXML){ + var doneName = done++, checkFn = dirCheck; + + if ( typeof part === "string" && !part.match(/\W/) ) { + var nodeCheck = part = isXML ? part : part.toUpperCase(); + checkFn = dirNodeCheck; + } + + checkFn("previousSibling", part, doneName, checkSet, nodeCheck, isXML); + } + }, + find: { + ID: function(match, context, isXML){ + if ( typeof context.getElementById !== "undefined" && !isXML ) { + var m = context.getElementById(match[1]); + return m ? [m] : []; + } + }, + NAME: function(match, context, isXML){ + if ( typeof context.getElementsByName !== "undefined" ) { + var ret = [], results = context.getElementsByName(match[1]); + + for ( var i = 0, l = results.length; i < l; i++ ) { + if ( results[i].getAttribute("name") === match[1] ) { + ret.push( results[i] ); + } + } + + return ret.length === 0 ? null : ret; + } + }, + TAG: function(match, context){ + return context.getElementsByTagName(match[1]); + } + }, + preFilter: { + CLASS: function(match, curLoop, inplace, result, not, isXML){ + match = " " + match[1].replace(/\\/g, "") + " "; + + if ( isXML ) { + return match; + } + + for ( var i = 0, elem; (elem = curLoop[i]) != null; i++ ) { + if ( elem ) { + if ( not ^ (elem.className && (" " + elem.className + " ").indexOf(match) >= 0) ) { + if ( !inplace ) + result.push( elem ); + } else if ( inplace ) { + curLoop[i] = false; + } + } + } + + return false; + }, + ID: function(match){ + return match[1].replace(/\\/g, ""); + }, + TAG: function(match, curLoop){ + for ( var i = 0; curLoop[i] === false; i++ ){} + return curLoop[i] && isXML(curLoop[i]) ? match[1] : match[1].toUpperCase(); + }, + CHILD: function(match){ + if ( match[1] == "nth" ) { + // parse equations like 'even', 'odd', '5', '2n', '3n+2', '4n-1', '-n+6' + var test = /(-?)(\d*)n((?:\+|-)?\d*)/.exec( + match[2] == "even" && "2n" || match[2] == "odd" && "2n+1" || + !/\D/.test( match[2] ) && "0n+" + match[2] || match[2]); + + // calculate the numbers (first)n+(last) including if they are negative + match[2] = (test[1] + (test[2] || 1)) - 0; + match[3] = test[3] - 0; + } + + // TODO: Move to normal caching system + match[0] = done++; + + return match; + }, + ATTR: function(match, curLoop, inplace, result, not, isXML){ + var name = match[1].replace(/\\/g, ""); + + if ( !isXML && Expr.attrMap[name] ) { + match[1] = Expr.attrMap[name]; + } + + if ( match[2] === "~=" ) { + match[4] = " " + match[4] + " "; + } + + return match; + }, + PSEUDO: function(match, curLoop, inplace, result, not){ + if ( match[1] === "not" ) { + // If we're dealing with a complex expression, or a simple one + if ( match[3].match(chunker).length > 1 || /^\w/.test(match[3]) ) { + match[3] = Sizzle(match[3], null, null, curLoop); + } else { + var ret = Sizzle.filter(match[3], curLoop, inplace, true ^ not); + if ( !inplace ) { + result.push.apply( result, ret ); + } + return false; + } + } else if ( Expr.match.POS.test( match[0] ) || Expr.match.CHILD.test( match[0] ) ) { + return true; + } + + return match; + }, + POS: function(match){ + match.unshift( true ); + return match; + } + }, + filters: { + enabled: function(elem){ + return elem.disabled === false && elem.type !== "hidden"; + }, + disabled: function(elem){ + return elem.disabled === true; + }, + checked: function(elem){ + return elem.checked === true; + }, + selected: function(elem){ + // Accessing this property makes selected-by-default + // options in Safari work properly + elem.parentNode.selectedIndex; + return elem.selected === true; + }, + parent: function(elem){ + return !!elem.firstChild; + }, + empty: function(elem){ + return !elem.firstChild; + }, + has: function(elem, i, match){ + return !!Sizzle( match[3], elem ).length; + }, + header: function(elem){ + return /h\d/i.test( elem.nodeName ); + }, + text: function(elem){ + return "text" === elem.type; + }, + radio: function(elem){ + return "radio" === elem.type; + }, + checkbox: function(elem){ + return "checkbox" === elem.type; + }, + file: function(elem){ + return "file" === elem.type; + }, + password: function(elem){ + return "password" === elem.type; + }, + submit: function(elem){ + return "submit" === elem.type; + }, + image: function(elem){ + return "image" === elem.type; + }, + reset: function(elem){ + return "reset" === elem.type; + }, + button: function(elem){ + return "button" === elem.type || elem.nodeName.toUpperCase() === "BUTTON"; + }, + input: function(elem){ + return /input|select|textarea|button/i.test(elem.nodeName); + } + }, + setFilters: { + first: function(elem, i){ + return i === 0; + }, + last: function(elem, i, match, array){ + return i === array.length - 1; + }, + even: function(elem, i){ + return i % 2 === 0; + }, + odd: function(elem, i){ + return i % 2 === 1; + }, + lt: function(elem, i, match){ + return i < match[3] - 0; + }, + gt: function(elem, i, match){ + return i > match[3] - 0; + }, + nth: function(elem, i, match){ + return match[3] - 0 == i; + }, + eq: function(elem, i, match){ + return match[3] - 0 == i; + } + }, + filter: { + PSEUDO: function(elem, match, i, array){ + var name = match[1], filter = Expr.filters[ name ]; + + if ( filter ) { + return filter( elem, i, match, array ); + } else if ( name === "contains" ) { + return (elem.textContent || elem.innerText || "").indexOf(match[3]) >= 0; + } else if ( name === "not" ) { + var not = match[3]; + + for ( var i = 0, l = not.length; i < l; i++ ) { + if ( not[i] === elem ) { + return false; + } + } + + return true; + } + }, + CHILD: function(elem, match){ + var type = match[1], node = elem; + switch (type) { + case 'only': + case 'first': + while (node = node.previousSibling) { + if ( node.nodeType === 1 ) return false; + } + if ( type == 'first') return true; + node = elem; + case 'last': + while (node = node.nextSibling) { + if ( node.nodeType === 1 ) return false; + } + return true; + case 'nth': + var first = match[2], last = match[3]; + + if ( first == 1 && last == 0 ) { + return true; + } + + var doneName = match[0], + parent = elem.parentNode; + + if ( parent && (parent.sizcache !== doneName || !elem.nodeIndex) ) { + var count = 0; + for ( node = parent.firstChild; node; node = node.nextSibling ) { + if ( node.nodeType === 1 ) { + node.nodeIndex = ++count; + } + } + parent.sizcache = doneName; + } + + var diff = elem.nodeIndex - last; + if ( first == 0 ) { + return diff == 0; + } else { + return ( diff % first == 0 && diff / first >= 0 ); + } + } + }, + ID: function(elem, match){ + return elem.nodeType === 1 && elem.getAttribute("id") === match; + }, + TAG: function(elem, match){ + return (match === "*" && elem.nodeType === 1) || elem.nodeName === match; + }, + CLASS: function(elem, match){ + return (" " + (elem.className || elem.getAttribute("class")) + " ") + .indexOf( match ) > -1; + }, + ATTR: function(elem, match){ + var name = match[1], + result = Expr.attrHandle[ name ] ? + Expr.attrHandle[ name ]( elem ) : + elem[ name ] != null ? + elem[ name ] : + elem.getAttribute( name ), + value = result + "", + type = match[2], + check = match[4]; + + return result == null ? + type === "!=" : + type === "=" ? + value === check : + type === "*=" ? + value.indexOf(check) >= 0 : + type === "~=" ? + (" " + value + " ").indexOf(check) >= 0 : + !check ? + value && result !== false : + type === "!=" ? + value != check : + type === "^=" ? + value.indexOf(check) === 0 : + type === "$=" ? + value.substr(value.length - check.length) === check : + type === "|=" ? + value === check || value.substr(0, check.length + 1) === check + "-" : + false; + }, + POS: function(elem, match, i, array){ + var name = match[2], filter = Expr.setFilters[ name ]; + + if ( filter ) { + return filter( elem, i, match, array ); + } + } + } +}; + +var origPOS = Expr.match.POS; + +for ( var type in Expr.match ) { + Expr.match[ type ] = RegExp( Expr.match[ type ].source + /(?![^\[]*\])(?![^$]*$)/.source ); +} + +var makeArray = function(array, results) { + array = Array.prototype.slice.call( array ); + + if ( results ) { + results.push.apply( results, array ); + return results; + } + + return array; +}; + +// Perform a simple check to determine if the browser is capable of +// converting a NodeList to an array using builtin methods. +try { + Array.prototype.slice.call( document.documentElement.childNodes ); + +// Provide a fallback method if it does not work +} catch(e){ + makeArray = function(array, results) { + var ret = results || []; + + if ( toString.call(array) === "[object Array]" ) { + Array.prototype.push.apply( ret, array ); + } else { + if ( typeof array.length === "number" ) { + for ( var i = 0, l = array.length; i < l; i++ ) { + ret.push( array[i] ); + } + } else { + for ( var i = 0; array[i]; i++ ) { + ret.push( array[i] ); + } + } + } + + return ret; + }; +} + +var sortOrder; + +if ( document.documentElement.compareDocumentPosition ) { + sortOrder = function( a, b ) { + var ret = a.compareDocumentPosition(b) & 4 ? -1 : a === b ? 0 : 1; + if ( ret === 0 ) { + hasDuplicate = true; + } + return ret; + }; +} else if ( "sourceIndex" in document.documentElement ) { + sortOrder = function( a, b ) { + var ret = a.sourceIndex - b.sourceIndex; + if ( ret === 0 ) { + hasDuplicate = true; + } + return ret; + }; +} else if ( document.createRange ) { + sortOrder = function( a, b ) { + var aRange = a.ownerDocument.createRange(), bRange = b.ownerDocument.createRange(); + aRange.selectNode(a); + aRange.collapse(true); + bRange.selectNode(b); + bRange.collapse(true); + var ret = aRange.compareBoundaryPoints(Range.START_TO_END, bRange); + if ( ret === 0 ) { + hasDuplicate = true; + } + return ret; + }; +} + +// Check to see if the browser returns elements by name when +// querying by getElementById (and provide a workaround) +(function(){ + // We're going to inject a fake input element with a specified name + var form = document.createElement("form"), + id = "script" + (new Date).getTime(); + form.innerHTML = "<input name='" + id + "'/>"; + + // Inject it into the root element, check its status, and remove it quickly + var root = document.documentElement; + root.insertBefore( form, root.firstChild ); + + // The workaround has to do additional checks after a getElementById + // Which slows things down for other browsers (hence the branching) + if ( !!document.getElementById( id ) ) { + Expr.find.ID = function(match, context, isXML){ + if ( typeof context.getElementById !== "undefined" && !isXML ) { + var m = context.getElementById(match[1]); + return m ? m.id === match[1] || typeof m.getAttributeNode !== "undefined" && m.getAttributeNode("id").nodeValue === match[1] ? [m] : undefined : []; + } + }; + + Expr.filter.ID = function(elem, match){ + var node = typeof elem.getAttributeNode !== "undefined" && elem.getAttributeNode("id"); + return elem.nodeType === 1 && node && node.nodeValue === match; + }; + } + + root.removeChild( form ); +})(); + +(function(){ + // Check to see if the browser returns only elements + // when doing getElementsByTagName("*") + + // Create a fake element + var div = document.createElement("div"); + div.appendChild( document.createComment("") ); + + // Make sure no comments are found + if ( div.getElementsByTagName("*").length > 0 ) { + Expr.find.TAG = function(match, context){ + var results = context.getElementsByTagName(match[1]); + + // Filter out possible comments + if ( match[1] === "*" ) { + var tmp = []; + + for ( var i = 0; results[i]; i++ ) { + if ( results[i].nodeType === 1 ) { + tmp.push( results[i] ); + } + } + + results = tmp; + } + + return results; + }; + } + + // Check to see if an attribute returns normalized href attributes + div.innerHTML = "<a href='#'></a>"; + if ( div.firstChild && typeof div.firstChild.getAttribute !== "undefined" && + div.firstChild.getAttribute("href") !== "#" ) { + Expr.attrHandle.href = function(elem){ + return elem.getAttribute("href", 2); + }; + } +})(); + +if ( document.querySelectorAll ) (function(){ + var oldSizzle = Sizzle, div = document.createElement("div"); + div.innerHTML = "<p class='TEST'></p>"; + + // Safari can't handle uppercase or unicode characters when + // in quirks mode. + if ( div.querySelectorAll && div.querySelectorAll(".TEST").length === 0 ) { + return; + } + + Sizzle = function(query, context, extra, seed){ + context = context || document; + + // Only use querySelectorAll on non-XML documents + // (ID selectors don't work in non-HTML documents) + if ( !seed && context.nodeType === 9 && !isXML(context) ) { + try { + return makeArray( context.querySelectorAll(query), extra ); + } catch(e){} + } + + return oldSizzle(query, context, extra, seed); + }; + + Sizzle.find = oldSizzle.find; + Sizzle.filter = oldSizzle.filter; + Sizzle.selectors = oldSizzle.selectors; + Sizzle.matches = oldSizzle.matches; +})(); + +if ( document.getElementsByClassName && document.documentElement.getElementsByClassName ) (function(){ + var div = document.createElement("div"); + div.innerHTML = "<div class='test e'></div><div class='test'></div>"; + + // Opera can't find a second classname (in 9.6) + if ( div.getElementsByClassName("e").length === 0 ) + return; + + // Safari caches class attributes, doesn't catch changes (in 3.2) + div.lastChild.className = "e"; + + if ( div.getElementsByClassName("e").length === 1 ) + return; + + Expr.order.splice(1, 0, "CLASS"); + Expr.find.CLASS = function(match, context, isXML) { + if ( typeof context.getElementsByClassName !== "undefined" && !isXML ) { + return context.getElementsByClassName(match[1]); + } + }; +})(); + +function dirNodeCheck( dir, cur, doneName, checkSet, nodeCheck, isXML ) { + var sibDir = dir == "previousSibling" && !isXML; + for ( var i = 0, l = checkSet.length; i < l; i++ ) { + var elem = checkSet[i]; + if ( elem ) { + if ( sibDir && elem.nodeType === 1 ){ + elem.sizcache = doneName; + elem.sizset = i; + } + elem = elem[dir]; + var match = false; + + while ( elem ) { + if ( elem.sizcache === doneName ) { + match = checkSet[elem.sizset]; + break; + } + + if ( elem.nodeType === 1 && !isXML ){ + elem.sizcache = doneName; + elem.sizset = i; + } + + if ( elem.nodeName === cur ) { + match = elem; + break; + } + + elem = elem[dir]; + } + + checkSet[i] = match; + } + } +} + +function dirCheck( dir, cur, doneName, checkSet, nodeCheck, isXML ) { + var sibDir = dir == "previousSibling" && !isXML; + for ( var i = 0, l = checkSet.length; i < l; i++ ) { + var elem = checkSet[i]; + if ( elem ) { + if ( sibDir && elem.nodeType === 1 ) { + elem.sizcache = doneName; + elem.sizset = i; + } + elem = elem[dir]; + var match = false; + + while ( elem ) { + if ( elem.sizcache === doneName ) { + match = checkSet[elem.sizset]; + break; + } + + if ( elem.nodeType === 1 ) { + if ( !isXML ) { + elem.sizcache = doneName; + elem.sizset = i; + } + if ( typeof cur !== "string" ) { + if ( elem === cur ) { + match = true; + break; + } + + } else if ( Sizzle.filter( cur, [elem] ).length > 0 ) { + match = elem; + break; + } + } + + elem = elem[dir]; + } + + checkSet[i] = match; + } + } +} + +var contains = document.compareDocumentPosition ? function(a, b){ + return a.compareDocumentPosition(b) & 16; +} : function(a, b){ + return a !== b && (a.contains ? a.contains(b) : true); +}; + +var isXML = function(elem){ + return elem.nodeType === 9 && elem.documentElement.nodeName !== "HTML" || + !!elem.ownerDocument && isXML( elem.ownerDocument ); +}; + +var posProcess = function(selector, context){ + var tmpSet = [], later = "", match, + root = context.nodeType ? [context] : context; + + // Position selectors must be done after the filter + // And so must :not(positional) so we move all PSEUDOs to the end + while ( (match = Expr.match.PSEUDO.exec( selector )) ) { + later += match[0]; + selector = selector.replace( Expr.match.PSEUDO, "" ); + } + + selector = Expr.relative[selector] ? selector + "*" : selector; + + for ( var i = 0, l = root.length; i < l; i++ ) { + Sizzle( selector, root[i], tmpSet ); + } + + return Sizzle.filter( later, tmpSet ); +}; + +// EXPOSE +jQuery.find = Sizzle; +jQuery.filter = Sizzle.filter; +jQuery.expr = Sizzle.selectors; +jQuery.expr[":"] = jQuery.expr.filters; + +Sizzle.selectors.filters.hidden = function(elem){ + return elem.offsetWidth === 0 || elem.offsetHeight === 0; +}; + +Sizzle.selectors.filters.visible = function(elem){ + return elem.offsetWidth > 0 || elem.offsetHeight > 0; +}; + +Sizzle.selectors.filters.animated = function(elem){ + return jQuery.grep(jQuery.timers, function(fn){ + return elem === fn.elem; + }).length; +}; + +jQuery.multiFilter = function( expr, elems, not ) { + if ( not ) { + expr = ":not(" + expr + ")"; + } + + return Sizzle.matches(expr, elems); +}; + +jQuery.dir = function( elem, dir ){ + var matched = [], cur = elem[dir]; + while ( cur && cur != document ) { + if ( cur.nodeType == 1 ) + matched.push( cur ); + cur = cur[dir]; + } + return matched; +}; + +jQuery.nth = function(cur, result, dir, elem){ + result = result || 1; + var num = 0; + + for ( ; cur; cur = cur[dir] ) + if ( cur.nodeType == 1 && ++num == result ) + break; + + return cur; +}; + +jQuery.sibling = function(n, elem){ + var r = []; + + for ( ; n; n = n.nextSibling ) { + if ( n.nodeType == 1 && n != elem ) + r.push( n ); + } + + return r; +}; + +return; + +window.Sizzle = Sizzle; + +})(); +/* + * A number of helper functions used for managing events. + * Many of the ideas behind this code originated from + * Dean Edwards' addEvent library. + */ +jQuery.event = { + + // Bind an event to an element + // Original by Dean Edwards + add: function(elem, types, handler, data) { + if ( elem.nodeType == 3 || elem.nodeType == 8 ) + return; + + // For whatever reason, IE has trouble passing the window object + // around, causing it to be cloned in the process + if ( elem.setInterval && elem != window ) + elem = window; + + // Make sure that the function being executed has a unique ID + if ( !handler.guid ) + handler.guid = this.guid++; + + // if data is passed, bind to handler + if ( data !== undefined ) { + // Create temporary function pointer to original handler + var fn = handler; + + // Create unique handler function, wrapped around original handler + handler = this.proxy( fn ); + + // Store data in unique handler + handler.data = data; + } + + // Init the element's event structure + var events = jQuery.data(elem, "events") || jQuery.data(elem, "events", {}), + handle = jQuery.data(elem, "handle") || jQuery.data(elem, "handle", function(){ + // Handle the second event of a trigger and when + // an event is called after a page has unloaded + return typeof jQuery !== "undefined" && !jQuery.event.triggered ? + jQuery.event.handle.apply(arguments.callee.elem, arguments) : + undefined; + }); + // Add elem as a property of the handle function + // This is to prevent a memory leak with non-native + // event in IE. + handle.elem = elem; + + // Handle multiple events separated by a space + // jQuery(...).bind("mouseover mouseout", fn); + jQuery.each(types.split(/\s+/), function(index, type) { + // Namespaced event handlers + var namespaces = type.split("."); + type = namespaces.shift(); + handler.type = namespaces.slice().sort().join("."); + + // Get the current list of functions bound to this event + var handlers = events[type]; + + if ( jQuery.event.specialAll[type] ) + jQuery.event.specialAll[type].setup.call(elem, data, namespaces); + + // Init the event handler queue + if (!handlers) { + handlers = events[type] = {}; + + // Check for a special event handler + // Only use addEventListener/attachEvent if the special + // events handler returns false + if ( !jQuery.event.special[type] || jQuery.event.special[type].setup.call(elem, data, namespaces) === false ) { + // Bind the global event handler to the element + if (elem.addEventListener) + elem.addEventListener(type, handle, false); + else if (elem.attachEvent) + elem.attachEvent("on" + type, handle); + } + } + + // Add the function to the element's handler list + handlers[handler.guid] = handler; + + // Keep track of which events have been used, for global triggering + jQuery.event.global[type] = true; + }); + + // Nullify elem to prevent memory leaks in IE + elem = null; + }, + + guid: 1, + global: {}, + + // Detach an event or set of events from an element + remove: function(elem, types, handler) { + // don't do events on text and comment nodes + if ( elem.nodeType == 3 || elem.nodeType == 8 ) + return; + + var events = jQuery.data(elem, "events"), ret, index; + + if ( events ) { + // Unbind all events for the element + if ( types === undefined || (typeof types === "string" && types.charAt(0) == ".") ) + for ( var type in events ) + this.remove( elem, type + (types || "") ); + else { + // types is actually an event object here + if ( types.type ) { + handler = types.handler; + types = types.type; + } + + // Handle multiple events seperated by a space + // jQuery(...).unbind("mouseover mouseout", fn); + jQuery.each(types.split(/\s+/), function(index, type){ + // Namespaced event handlers + var namespaces = type.split("."); + type = namespaces.shift(); + var namespace = RegExp("(^|\\.)" + namespaces.slice().sort().join(".*\\.") + "(\\.|$)"); + + if ( events[type] ) { + // remove the given handler for the given type + if ( handler ) + delete events[type][handler.guid]; + + // remove all handlers for the given type + else + for ( var handle in events[type] ) + // Handle the removal of namespaced events + if ( namespace.test(events[type][handle].type) ) + delete events[type][handle]; + + if ( jQuery.event.specialAll[type] ) + jQuery.event.specialAll[type].teardown.call(elem, namespaces); + + // remove generic event handler if no more handlers exist + for ( ret in events[type] ) break; + if ( !ret ) { + if ( !jQuery.event.special[type] || jQuery.event.special[type].teardown.call(elem, namespaces) === false ) { + if (elem.removeEventListener) + elem.removeEventListener(type, jQuery.data(elem, "handle"), false); + else if (elem.detachEvent) + elem.detachEvent("on" + type, jQuery.data(elem, "handle")); + } + ret = null; + delete events[type]; + } + } + }); + } + + // Remove the expando if it's no longer used + for ( ret in events ) break; + if ( !ret ) { + var handle = jQuery.data( elem, "handle" ); + if ( handle ) handle.elem = null; + jQuery.removeData( elem, "events" ); + jQuery.removeData( elem, "handle" ); + } + } + }, + + // bubbling is internal + trigger: function( event, data, elem, bubbling ) { + // Event object or event type + var type = event.type || event; + + if( !bubbling ){ + event = typeof event === "object" ? + // jQuery.Event object + event[expando] ? event : + // Object literal + jQuery.extend( jQuery.Event(type), event ) : + // Just the event type (string) + jQuery.Event(type); + + if ( type.indexOf("!") >= 0 ) { + event.type = type = type.slice(0, -1); + event.exclusive = true; + } + + // Handle a global trigger + if ( !elem ) { + // Don't bubble custom events when global (to avoid too much overhead) + event.stopPropagation(); + // Only trigger if we've ever bound an event for it + if ( this.global[type] ) + jQuery.each( jQuery.cache, function(){ + if ( this.events && this.events[type] ) + jQuery.event.trigger( event, data, this.handle.elem ); + }); + } + + // Handle triggering a single element + + // don't do events on text and comment nodes + if ( !elem || elem.nodeType == 3 || elem.nodeType == 8 ) + return undefined; + + // Clean up in case it is reused + event.result = undefined; + event.target = elem; + + // Clone the incoming data, if any + data = jQuery.makeArray(data); + data.unshift( event ); + } + + event.currentTarget = elem; + + // Trigger the event, it is assumed that "handle" is a function + var handle = jQuery.data(elem, "handle"); + if ( handle ) + handle.apply( elem, data ); + + // Handle triggering native .onfoo handlers (and on links since we don't call .click() for links) + if ( (!elem[type] || (jQuery.nodeName(elem, 'a') && type == "click")) && elem["on"+type] && elem["on"+type].apply( elem, data ) === false ) + event.result = false; + + // Trigger the native events (except for clicks on links) + if ( !bubbling && elem[type] && !event.isDefaultPrevented() && !(jQuery.nodeName(elem, 'a') && type == "click") ) { + this.triggered = true; + try { + elem[ type ](); + // prevent IE from throwing an error for some hidden elements + } catch (e) {} + } + + this.triggered = false; + + if ( !event.isPropagationStopped() ) { + var parent = elem.parentNode || elem.ownerDocument; + if ( parent ) + jQuery.event.trigger(event, data, parent, true); + } + }, + + handle: function(event) { + // returned undefined or false + var all, handlers; + + event = arguments[0] = jQuery.event.fix( event || window.event ); + event.currentTarget = this; + + // Namespaced event handlers + var namespaces = event.type.split("."); + event.type = namespaces.shift(); + + // Cache this now, all = true means, any handler + all = !namespaces.length && !event.exclusive; + + var namespace = RegExp("(^|\\.)" + namespaces.slice().sort().join(".*\\.") + "(\\.|$)"); + + handlers = ( jQuery.data(this, "events") || {} )[event.type]; + + for ( var j in handlers ) { + var handler = handlers[j]; + + // Filter the functions by class + if ( all || namespace.test(handler.type) ) { + // Pass in a reference to the handler function itself + // So that we can later remove it + event.handler = handler; + event.data = handler.data; + + var ret = handler.apply(this, arguments); + + if( ret !== undefined ){ + event.result = ret; + if ( ret === false ) { + event.preventDefault(); + event.stopPropagation(); + } + } + + if( event.isImmediatePropagationStopped() ) + break; + + } + } + }, + + props: "altKey attrChange attrName bubbles button cancelable charCode clientX clientY ctrlKey currentTarget data detail eventPhase fromElement handler keyCode metaKey newValue originalTarget pageX pageY prevValue relatedNode relatedTarget screenX screenY shiftKey srcElement target toElement view wheelDelta which".split(" "), + + fix: function(event) { + if ( event[expando] ) + return event; + + // store a copy of the original event object + // and "clone" to set read-only properties + var originalEvent = event; + event = jQuery.Event( originalEvent ); + + for ( var i = this.props.length, prop; i; ){ + prop = this.props[ --i ]; + event[ prop ] = originalEvent[ prop ]; + } + + // Fix target property, if necessary + if ( !event.target ) + event.target = event.srcElement || document; // Fixes #1925 where srcElement might not be defined either + + // check if target is a textnode (safari) + if ( event.target.nodeType == 3 ) + event.target = event.target.parentNode; + + // Add relatedTarget, if necessary + if ( !event.relatedTarget && event.fromElement ) + event.relatedTarget = event.fromElement == event.target ? event.toElement : event.fromElement; + + // Calculate pageX/Y if missing and clientX/Y available + if ( event.pageX == null && event.clientX != null ) { + var doc = document.documentElement, body = document.body; + event.pageX = event.clientX + (doc && doc.scrollLeft || body && body.scrollLeft || 0) - (doc.clientLeft || 0); + event.pageY = event.clientY + (doc && doc.scrollTop || body && body.scrollTop || 0) - (doc.clientTop || 0); + } + + // Add which for key events + if ( !event.which && ((event.charCode || event.charCode === 0) ? event.charCode : event.keyCode) ) + event.which = event.charCode || event.keyCode; + + // Add metaKey to non-Mac browsers (use ctrl for PC's and Meta for Macs) + if ( !event.metaKey && event.ctrlKey ) + event.metaKey = event.ctrlKey; + + // Add which for click: 1 == left; 2 == middle; 3 == right + // Note: button is not normalized, so don't use it + if ( !event.which && event.button ) + event.which = (event.button & 1 ? 1 : ( event.button & 2 ? 3 : ( event.button & 4 ? 2 : 0 ) )); + + return event; + }, + + proxy: function( fn, proxy ){ + proxy = proxy || function(){ return fn.apply(this, arguments); }; + // Set the guid of unique handler to the same of original handler, so it can be removed + proxy.guid = fn.guid = fn.guid || proxy.guid || this.guid++; + // So proxy can be declared as an argument + return proxy; + }, + + special: { + ready: { + // Make sure the ready event is setup + setup: bindReady, + teardown: function() {} + } + }, + + specialAll: { + live: { + setup: function( selector, namespaces ){ + jQuery.event.add( this, namespaces[0], liveHandler ); + }, + teardown: function( namespaces ){ + if ( namespaces.length ) { + var remove = 0, name = RegExp("(^|\\.)" + namespaces[0] + "(\\.|$)"); + + jQuery.each( (jQuery.data(this, "events").live || {}), function(){ + if ( name.test(this.type) ) + remove++; + }); + + if ( remove < 1 ) + jQuery.event.remove( this, namespaces[0], liveHandler ); + } + } + } + } +}; + +jQuery.Event = function( src ){ + // Allow instantiation without the 'new' keyword + if( !this.preventDefault ) + return new jQuery.Event(src); + + // Event object + if( src && src.type ){ + this.originalEvent = src; + this.type = src.type; + // Event type + }else + this.type = src; + + // timeStamp is buggy for some events on Firefox(#3843) + // So we won't rely on the native value + this.timeStamp = now(); + + // Mark it as fixed + this[expando] = true; +}; + +function returnFalse(){ + return false; +} +function returnTrue(){ + return true; +} + +// jQuery.Event is based on DOM3 Events as specified by the ECMAScript Language Binding +// http://www.w3.org/TR/2003/WD-DOM-Level-3-Events-20030331/ecma-script-bindin… +jQuery.Event.prototype = { + preventDefault: function() { + this.isDefaultPrevented = returnTrue; + + var e = this.originalEvent; + if( !e ) + return; + // if preventDefault exists run it on the original event + if (e.preventDefault) + e.preventDefault(); + // otherwise set the returnValue property of the original event to false (IE) + e.returnValue = false; + }, + stopPropagation: function() { + this.isPropagationStopped = returnTrue; + + var e = this.originalEvent; + if( !e ) + return; + // if stopPropagation exists run it on the original event + if (e.stopPropagation) + e.stopPropagation(); + // otherwise set the cancelBubble property of the original event to true (IE) + e.cancelBubble = true; + }, + stopImmediatePropagation:function(){ + this.isImmediatePropagationStopped = returnTrue; + this.stopPropagation(); + }, + isDefaultPrevented: returnFalse, + isPropagationStopped: returnFalse, + isImmediatePropagationStopped: returnFalse +}; +// Checks if an event happened on an element within another element +// Used in jQuery.event.special.mouseenter and mouseleave handlers +var withinElement = function(event) { + // Check if mouse(over|out) are still within the same parent element + var parent = event.relatedTarget; + // Traverse up the tree + while ( parent && parent != this ) + try { parent = parent.parentNode; } + catch(e) { parent = this; } + + if( parent != this ){ + // set the correct event type + event.type = event.data; + // handle event if we actually just moused on to a non sub-element + jQuery.event.handle.apply( this, arguments ); + } +}; + +jQuery.each({ + mouseover: 'mouseenter', + mouseout: 'mouseleave' +}, function( orig, fix ){ + jQuery.event.special[ fix ] = { + setup: function(){ + jQuery.event.add( this, orig, withinElement, fix ); + }, + teardown: function(){ + jQuery.event.remove( this, orig, withinElement ); + } + }; +}); + +jQuery.fn.extend({ + bind: function( type, data, fn ) { + return type == "unload" ? this.one(type, data, fn) : this.each(function(){ + jQuery.event.add( this, type, fn || data, fn && data ); + }); + }, + + one: function( type, data, fn ) { + var one = jQuery.event.proxy( fn || data, function(event) { + jQuery(this).unbind(event, one); + return (fn || data).apply( this, arguments ); + }); + return this.each(function(){ + jQuery.event.add( this, type, one, fn && data); + }); + }, + + unbind: function( type, fn ) { + return this.each(function(){ + jQuery.event.remove( this, type, fn ); + }); + }, + + trigger: function( type, data ) { + return this.each(function(){ + jQuery.event.trigger( type, data, this ); + }); + }, + + triggerHandler: function( type, data ) { + if( this[0] ){ + var event = jQuery.Event(type); + event.preventDefault(); + event.stopPropagation(); + jQuery.event.trigger( event, data, this[0] ); + return event.result; + } + }, + + toggle: function( fn ) { + // Save reference to arguments for access in closure + var args = arguments, i = 1; + + // link all the functions, so any of them can unbind this click handler + while( i < args.length ) + jQuery.event.proxy( fn, args[i++] ); + + return this.click( jQuery.event.proxy( fn, function(event) { + // Figure out which function to execute + this.lastToggle = ( this.lastToggle || 0 ) % i; + + // Make sure that clicks stop + event.preventDefault(); + + // and execute the function + return args[ this.lastToggle++ ].apply( this, arguments ) || false; + })); + }, + + hover: function(fnOver, fnOut) { + return this.mouseenter(fnOver).mouseleave(fnOut); + }, + + ready: function(fn) { + // Attach the listeners + bindReady(); + + // If the DOM is already ready + if ( jQuery.isReady ) + // Execute the function immediately + fn.call( document, jQuery ); + + // Otherwise, remember the function for later + else + // Add the function to the wait list + jQuery.readyList.push( fn ); + + return this; + }, + + live: function( type, fn ){ + var proxy = jQuery.event.proxy( fn ); + proxy.guid += this.selector + type; + + jQuery(document).bind( liveConvert(type, this.selector), this.selector, proxy ); + + return this; + }, + + die: function( type, fn ){ + jQuery(document).unbind( liveConvert(type, this.selector), fn ? { guid: fn.guid + this.selector + type } : null ); + return this; + } +}); + +function liveHandler( event ){ + var check = RegExp("(^|\\.)" + event.type + "(\\.|$)"), + stop = true, + elems = []; + + jQuery.each(jQuery.data(this, "events").live || [], function(i, fn){

1 0

Galaxy refusing traffic from other machines?
by Chevreux, Bastien 17 Feb '10

17 Feb '10

Hello there, I downloaded Galaxy (Dist) from http://bitbucket.org/galaxy/galaxy-dist/ ran a basic setup and then "run.sh". Joy, Galaxy works fine. But when trying to access Galaxy from another machine, the connection is refused. I've checked that it's not a funny misconfiguration of our network which would block traffic between the machines, so I deduce that it's Galaxy which rejects every traffic not coming from localhost. I've searched a bit in the config files where to change that but did not find a place. Where do I tell Galaxy it should accept traffic from a given host (or IP range). Regards, Bastien -- DSM Nutritional Products AG R&D Human Nutrition & Health Bioinformatics - Bldg. 203 / 115 P.O. Box 2676 CH-4002 Basel / Switzerland Tel. +41 61 815 8264 DISCLAIMER : This e-mail is for the intended recipient only If you have received it by mistake please let us know by reply and then delete it from your system; access, disclosure, copying, distribution or reliance on any of it by anyone else is prohibited. If you as intended recipient have received this e-mail incorrectly, please notify the sender (via e-mail) immediately.

2 4

[hg] galaxy 3402: Open links to galaxy screencasts in pages in a...
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/bb50ac713feb changeset: 3402:bb50ac713feb user: jeremy goecks <jeremy.goecks(a)emory.edu> date: Tue Feb 16 17:05:12 2010 -0500 description: Open links to galaxy screencasts in pages in an overlay. diffstat: templates/display_base.mako | 46 +++++++++++++++++++++++++++++++++----------- 1 files changed, 34 insertions(+), 12 deletions(-) diffs (56 lines): diff -r 99b373f37475 -r bb50ac713feb templates/display_base.mako --- a/templates/display_base.mako Tue Feb 16 14:07:50 2010 -0500 +++ b/templates/display_base.mako Tue Feb 16 17:05:12 2010 -0500 @@ -35,18 +35,40 @@ ${h.js( "galaxy.base", "jquery", "json2", "jquery.autocomplete", "autocomplete_tagging" )} <script type="text/javascript"> - // - // Handle click on community tag. - // - function community_tag_click(tag_name, tag_value) - { - <% controller_name = get_controller_name( item ) %> - var href = '${h.url_for ( controller='/' + controller_name , action='list_published')}'; - href = href + "?f-tags=" + tag_name; - if (tag_value != null && tag_value != "") - href = href + ":" + tag_value; - self.location = href; - } + // + // Handle click on community tag. + // + function community_tag_click(tag_name, tag_value) + { + <% controller_name = get_controller_name( item ) %> + var href = '${h.url_for ( controller='/' + controller_name , action='list_published')}'; + href = href + "?f-tags=" + tag_name; + if (tag_value != null && tag_value != "") + href = href + ":" + tag_value; + self.location = href; + } + + $(document).ready( function() + { + // Set links to Galaxy screencasts to open in overlay. + $(this).find("a[href^='http://screencast.g2.bx.psu.edu/']").each( function() + { + $(this).click( function() + { + var href = $(this).attr('href'); + options = + { + url: href, + width: 640, + height: 480, + scroll: 'no' + }; + show_in_overlay(options); + return false; + }); + }); + + }); </script> </%def>

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[hg] galaxy 3401: Remove header from displayed page.
by Greg Von Kuster 17 Feb '10

17 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/99b373f37475 changeset: 3401:99b373f37475 user: jeremy goecks <jeremy.goecks(a)emory.edu> date: Tue Feb 16 14:07:50 2010 -0500 description: Remove header from displayed page. diffstat: templates/page/display.mako | 4 ++++ 1 files changed, 4 insertions(+), 0 deletions(-) diffs (14 lines): diff -r a4cd313cf84b -r 99b373f37475 templates/page/display.mako --- a/templates/page/display.mako Tue Feb 16 11:50:50 2010 -0500 +++ b/templates/page/display.mako Tue Feb 16 14:07:50 2010 -0500 @@ -202,6 +202,10 @@ </style> </%def> +<%def name="render_item_header( item )"> + ## No header for pages. +</%def> + <%def name="render_item_links( page )"> </%def>

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2010 GMOD Summer School - Americas
by Dave Clements, GMOD Help Desk 16 Feb '10

16 Feb '10

Hello all, I am pleased to announce that we are now accepting applications for: 2010 GMOD Summer School - Americas 6-9 May 2010 NESCent, Durham, NC, USA http://gmod.org/wiki/2010_GMOD_Summer_School_-_Americas This will be a hands-on multi-day course aimed at teaching new GMOD users/administrators how to get GMOD Components up and running. The course will introduce participants to the GMOD project and then focus on installation, configuration and integration of popular GMOD Components. The course will be held May 6-9, at NESCent in Durham, NC. These components will be covered: * Apollo - genome annotation editor * Chado - a modular and extensible database schema * Galaxy - workflow system * GBrowse - the Generic Genome Browser * GBrowse_syn - A generic synteny browser * JBrowse - genome browser * MAKER - genome annotation pipeline * Tripal - web front end for Chado The deadline for applying is the end of Friday, February 22. Admission is competitive and is based on the strength of the application (especially the statement of interest). In 2009 there were over 50 applications for the 25 slots. Any applications received after the deadline will be placed on the waiting list. See the course page for details and an application link: http://gmod.org/wiki/2010_GMOD_Summer_School_-_Americas Thanks, Dave Clements GMOD Help Desk PS: We are also investigating holding a GMOD course in the Asia/Pacific region, sometime this fall. Watch the GMOD mailing lists and the GMOD News page/RSS feed for updates. -- Please keep responses on the list! http://gmod.org/wiki/2010_GMOD_Summer_School_-_Americas http://gmod.org/wiki/GMOD_News Was this helpful? http://gmod.org/wiki/Help_Desk_Feedback

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[hg] galaxy 3400: Filter out sharing roles from being displayed ...
by Greg Von Kuster 16 Feb '10

16 Feb '10

details: http://www.bx.psu.edu/hg/galaxy/rev/a4cd313cf84b changeset: 3400:a4cd313cf84b user: Greg Von Kuster <greg(a)bx.psu.edu> date: Tue Feb 16 11:50:50 2010 -0500 description: Filter out sharing roles from being displayed on permissions forms unless they belong to the current user. diffstat: lib/galaxy/security/__init__.py | 31 ++++++++++++++++++++++--------- 1 files changed, 22 insertions(+), 9 deletions(-) diffs (62 lines): diff -r e783e000f7c3 -r a4cd313cf84b lib/galaxy/security/__init__.py --- a/lib/galaxy/security/__init__.py Tue Feb 16 09:44:07 2010 -0500 +++ b/lib/galaxy/security/__init__.py Tue Feb 16 11:50:50 2010 -0500 @@ -139,13 +139,19 @@ if not trans.user: return trans.sa_session.query( trans.app.model.Role ) \ .filter( and_( self.model.Role.table.c.deleted==False, - self.model.Role.table.c.type != self.model.Role.types.PRIVATE ) ) \ + self.model.Role.table.c.type != self.model.Role.types.PRIVATE, + self.model.Role.table.c.type != self.model.Role.types.SHARING ) ) \ .order_by( self.model.Role.table.c.name ) # Add the current user's private role roles.add( self.get_private_user_role( trans.user ) ) + # Add the current user's sharing roles + for role in self.get_sharing_roles( trans.user ): + roles.add( role ) + # Add all remaining non-private, non-sharing roles for role in trans.sa_session.query( trans.app.model.Role ) \ .filter( and_( self.model.Role.table.c.deleted==False, - self.model.Role.table.c.type != self.model.Role.types.PRIVATE ) ) \ + self.model.Role.table.c.type != self.model.Role.types.PRIVATE, + self.model.Role.table.c.type != self.model.Role.types.SHARING ) ) \ .order_by( self.model.Role.table.c.name ): roles.add( role ) return sort_by_attr( [ role for role in roles ], 'name' ) @@ -172,15 +178,18 @@ return sort_by_attr( [ role for role in roles ], 'name' ) def ok_to_display( self, trans, role ): """ - Method for checking if a role is not private, unless it is the current user's - private role. Private roles, except for the current user's private role, are - never displayed, no matter what. + Method for checking if: + - a role is private and is the current user's private role + - a role is a sharing role and belongs to the current user """ - if trans.user and ( role.type != self.model.Role.types.PRIVATE or role == self.get_private_user_role( trans.user ) ): + if trans.user: + if role.type == self.model.Role.types.PRIVATE: + return role == self.get_private_user_role( trans.user ) + if role.type == self.model.Role.types.SHARING: + return role in self.get_sharing_roles( trans.user ) + # If role.type is neither private nor sharing, it's ok to display return True - if not trans.user and role.type != self.model.Role.types.PRIVATE: - return True - return False + return role.type != self.model.Role.types.PRIVATE and role.type != self.model.Role.types.SHARING def allow_action( self, roles, action, item ): """ Method for checking a permission for the current user ( based on roles ) to perform a @@ -287,6 +296,10 @@ else: return None return role + def get_sharing_roles( self, user ): + return self.sa_session.query( self.model.Role ) \ + .filter( and_( ( self.model.Role.table.c.name ).like( "Sharing role for: %" + user.email + "%" ), + self.model.Role.table.c.type == self.model.Role.types.SHARING ) ) def user_set_default_permissions( self, user, permissions={}, history=False, dataset=False, bypass_manage_permission=False, default_access_private = False ): # bypass_manage_permission is used to change permissions of datasets in a userless history when logging in if user is None:

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