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[hg] galaxy 1478: Add excanvas javascript (emulates <canvas> in ...
by greg＠scofield.bx.psu.edu 27 Aug '08

27 Aug '08

details: http://www.bx.psu.edu/hg/galaxy/rev/6eac08f7edcf changeset: 1478:6eac08f7edcf user: James Taylor <james(a)jamestaylor.org> date: Fri Aug 22 17:44:32 2008 -0400 description: Add excanvas javascript (emulates <canvas> in IE using silverlight) 2 file(s) affected in this change: static/scripts/excanvas.js static/scripts/packed/excanvas.js diffs (780 lines): diff -r 99e223f6a132 -r 6eac08f7edcf static/scripts/excanvas.js --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/static/scripts/excanvas.js Fri Aug 22 17:44:32 2008 -0400 @@ -0,0 +1,770 @@ +// Copyright 2006 Google Inc. +// +// Licensed under the Apache License, Version 2.0 (the "License"); +// you may not use this file except in compliance with the License. +// You may obtain a copy of the License at +// +// http://www.apache.org/licenses/LICENSE-2.0 +// +// Unless required by applicable law or agreed to in writing, software +// distributed under the License is distributed on an "AS IS" BASIS, +// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +// See the License for the specific language governing permissions and +// limitations under the License. + + +// Known Issues: (From VML version) +// +// * Patterns are not implemented. +// * Radial gradient are not implemented. The VML version of these look very +// different from the canvas one. +// * Clipping paths are not implemented. +// * Coordsize. The width and height attribute have higher priority than the +// width and height style values which isn't correct. +// * Painting mode isn't implemented. +// * Canvas width/height should is using content-box by default. IE in +// Quirks mode will draw the canvas using border-box. Either change your +// doctype to HTML5 +// (http://www.whatwg.org/specs/web-apps/current-work/#the-doctype) +// or use Box Sizing Behavior from WebFX +// (http://webfx.eae.net/dhtml/boxsizing/boxsizing.html) +// * Optimize. There is always room for speed improvements. + +//Known Issues: Silverlight version +// +// * Doing a transformation during a path (ie lineTo, transform, lineTo) will +// not work corerctly because the transform is done to the whole path (ie +// transform, lineTo, lineTo) +// * Patterns are not yet implemented. + + +// only add this code if we do not already have a canvas implementation +if (!window.CanvasRenderingContext2D) { + +(function () { + + var xamlId; + + var G_vmlCanvasManager_ = { + init: function (opt_doc) { + var doc = opt_doc || document; + // Create a dummy element so that IE will allow canvas elements to be + // recognized. + doc.createElement('canvas'); + if (/MSIE/.test(navigator.userAgent) && !window.opera) { + var self = this; + + createXamlScriptTag(); + + doc.attachEvent('onreadystatechange', function () { + self.init_(doc); + }); + } + }, + + init_: function (doc) { + // setup default css + var ss = doc.createStyleSheet(); + ss.cssText = 'canvas{display:inline-block;overflow:hidden;' + + // default size is 300x150 in Gecko and Opera + 'text-align:left;width:300px;height:150px}' + + 'canvas object{width:100%;height:100%;border:0;' + + 'background:transparen;margin:0}'; + + // find all canvas elements + var els = doc.getElementsByTagName('canvas'); + for (var i = 0; i < els.length; i++) { + if (!els[i].getContext) { + this.initElement(els[i]); + } + } + }, + + + /** + * Public initializes a canvas element so that it can be used as canvas + * element from now on. This is called automatically before the page is + * loaded but if you are creating elements using createElement you need to + * make sure this is called on the element. + * @param {HTMLElement} el The canvas element to initialize. + * @return {HTMLElement} the element that was created. + */ + initElement: function (el) { + el.getContext = function () { + if (this.context_) { + return this.context_; + } + return this.context_ = new CanvasRenderingContext2D_(this); + }; + + var attrs = el.attributes; + if (attrs.width && attrs.width.specified) { + // TODO: use runtimeStyle and coordsize + // el.getContext().setWidth_(attrs.width.nodeValue); + el.style.width = attrs.width.nodeValue + 'px'; + } else { + el.width = el.clientWidth; + } + if (attrs.height && attrs.height.specified) { + // TODO: use runtimeStyle and coordsize + // el.getContext().setHeight_(attrs.height.nodeValue); + el.style.height = attrs.height.nodeValue + 'px'; + } else { + el.height = el.clientHeight; + } + + // insert object tag + el.innerHTML = getObjectHtml(); + + // do not use inline function because that will leak memory + el.attachEvent('onpropertychange', onPropertyChange); + return el; + } + }; + + function onPropertyChange(e) { + var el = e.srcElement; + + switch (e.propertyName) { + case 'width': + el.style.width = el.attributes.width.nodeValue + 'px'; + el.getContext().clearRect(); + break; + case 'height': + el.style.height = el.attributes.height.nodeValue + 'px'; + el.getContext().clearRect(); + break; + } + } + + G_vmlCanvasManager_.init(); + + function createXamlScriptTag() { + // This script tag contains the boilerplate XAML. + document.write('<script type=text/xaml>' + + '<Canvas x:Name="root" ' + + 'xmlns="http://schemas.microsoft.com/client/2007" ' + + 'xmlns:x="http://schemas.microsoft.com/winfx/2006/xaml" ' + + 'Width="300" ' + + 'Height="150" ' + + 'Background="Transparent"> ' + + '</Canvas>' + + '</script>'); + // Find the id of the writtenscript file. + var scripts = document.scripts; + var script = scripts[scripts.length - 1]; + xamlId = script.uniqueID; + script.id = xamlId; + } + + function getObjectHtml(fn) { + return '<object type="application/x-silverlight" >' + + '<param name="windowless" value="true">' + + '<param name="background" value="transparent">' + + '<param name="source" value="#' + xamlId + '">' + + '</object>'; + } + + function hasSilverlight() { + try { + new ActiveXObject('AgControl.AgControl'); + return true; + } catch(_) { + return false; + } + } + + // precompute "00" to "FF" + var dec2hex = []; + for (var i = 0; i < 16; i++) { + for (var j = 0; j < 16; j++) { + dec2hex[i * 16 + j] = i.toString(16) + j.toString(16); + } + } + + function createMatrixIdentity() { + return [ + [1, 0, 0], + [0, 1, 0], + [0, 0, 1] + ]; + } + + function matrixMultiply(m1, m2) { + var result = createMatrixIdentity(); + + for (var x = 0; x < 3; x++) { + for (var y = 0; y < 3; y++) { + var sum = 0; + + for (var z = 0; z < 3; z++) { + sum += m1[x][z] * m2[z][y]; + } + + result[x][y] = sum; + } + } + return result; + } + + function doTransform(ctx) { + transformObject(ctx, getRoot(ctx), ctx.m_); + } + + function transformObject(ctx, obj, m) { + var transform = obj.renderTransform; + var matrix; + if (!transform) { + transform = create(ctx, '<MatrixTransform/>'); + matrix = create(ctx, '<Matrix/>'); + transform.matrix = matrix; + obj.renderTransform = transform; + } else { + matrix = transform.matrix; + } + + matrix.m11 = m[0][0]; + matrix.m12 = m[0][1]; + matrix.m21 = m[1][0]; + matrix.m22 = m[1][1]; + matrix.offsetX = m[2][0]; + matrix.offsetY = m[2][1]; + } + + function copyState(o1, o2) { + o2.fillStyle = o1.fillStyle; + o2.lineCap = o1.lineCap; + o2.lineJoin = o1.lineJoin; + o2.lineWidth = o1.lineWidth; + o2.miterLimit = o1.miterLimit; + o2.shadowBlur = o1.shadowBlur; + o2.shadowColor = o1.shadowColor; + o2.shadowOffsetX = o1.shadowOffsetX; + o2.shadowOffsetY = o1.shadowOffsetY; + o2.strokeStyle = o1.strokeStyle; + o2.globalAlpha = o1.globalAlpha; + o2.arcScaleX_ = o1.arcScaleX_; + o2.arcScaleY_ = o1.arcScaleY_; + } + + function translateColor(s) { + var rgbaMatch = /rgba\(([^)]+)\)/gi.exec(s); + if (rgbaMatch) { + var parts = rgbaMatch[1].split(','); + return '#' + dec2hex[Math.floor(Number(parts[3]) * 255)] + + dec2hex[Number(parts[0])] + + dec2hex[Number(parts[1])] + + dec2hex[Number(parts[2])]; + } + + var rgbMatch = /rgb\(([^)]+)\)/gi.exec(s); + if (rgbMatch) { + var parts = rgbMatch[1].split(','); + return '#FF' + dec2hex[Number(parts[0])] + + dec2hex[Number(parts[1])] + + dec2hex[Number(parts[2])]; + } + + return s; + } + + function processLineCap(lineCap) { + switch (lineCap) { + case 'butt': + return 'flat'; + case 'round': + return 'round'; + case 'square': + default: + return 'square'; + } + } + + function getRoot(ctx) { + return ctx.canvas.firstChild.content.findName('root'); + } + + function create(ctx, s, opt_args) { + if (opt_args) { + s = s.replace(/\%(\d+)/g, function(match, index) { + return opt_args[Number(index) - 1]; + }); + } + + try { + return ctx.canvas.firstChild.content.createFromXaml(s); + } catch (ex) { + throw Error('Could not create XAML from: ' + s); + } + } + + function drawShape(ctx, s, opt_args) { + var canvas = ctx.lastCanvas_ || create(ctx, '<Canvas/>'); + var shape = create(ctx, s, opt_args); + canvas.children.add(shape); + transformObject(ctx, canvas, ctx.m_); + if (!ctx.lastCanvas_) { + getRoot(ctx).children.add(canvas); + ctx.lastCanvas_ = canvas; + } + return shape; + } + + function createBrushObject(ctx, value) { + if (value instanceof CanvasGradient_) { + return value.createBrush_(ctx); + } else if (value instanceof CanvasPattern_) { + throw Error('Not implemented'); + } else { + return create(ctx, '<SolidColorBrush Color="%1"/>', + [translateColor(value)]); + } + } + + /** + * This class implements CanvasRenderingContext2D interface as described by + * the WHATWG. + * @param {HTMLElement} surfaceElement The element that the 2D context should + * be associated with + */ + function CanvasRenderingContext2D_(surfaceElement) { + this.m_ = createMatrixIdentity(); + this.lastCanvas_ = null; + + this.mStack_ = []; + this.aStack_ = []; + this.currentPath_ = []; + + // Canvas context properties + this.strokeStyle = '#000'; + this.fillStyle = '#000'; + + this.lineWidth = 1; + this.lineJoin = 'miter'; + this.lineCap = 'butt'; + this.miterLimit = 10; + this.globalAlpha = 1; + this.canvas = surfaceElement; + }; + + + var contextPrototype = CanvasRenderingContext2D_.prototype; + + contextPrototype.clearRect = function() { + var root = getRoot(this); + root.children.clear(); + + // TODO: Implement + this.currentPath_ = []; + this.lastCanvas_ = null; + + }; + + contextPrototype.beginPath = function() { + // TODO: Branch current matrix so that save/restore has no effect + // as per safari docs. + + this.currentPath_ = []; + }; + + contextPrototype.moveTo = function(aX, aY) { + this.currentPath_.push('M' + aX + ',' + aY); + }; + + contextPrototype.lineTo = function(aX, aY) { + if (this.currentPath_.length == 0) return; + this.currentPath_.push('L' + aX + ',' + aY); + }; + + contextPrototype.bezierCurveTo = function(aCP1x, aCP1y, + aCP2x, aCP2y, + aX, aY) { + if (this.currentPath_.length == 0) return; + this.currentPath_.push('C' + aCP1x + ',' + aCP1y + ' ' + + aCP2x + ',' + aCP2y + ' ' + + aX + ' ' + aY); + }; + + contextPrototype.quadraticCurveTo = function(aCPx, aCPy, aX, aY) { + if (this.currentPath_.length == 0) return; + this.currentPath_.push('Q' + aCPx + ',' + aCPy + ' ' + + aX + ',' + aY); + }; + + contextPrototype.arcTo = function(x1, y1, x2, y2, radius) { + if (this.currentPath_.length == 0) return; + // TODO: Implement + }; + + contextPrototype.arc = function(aX, aY, aRadius, + aStartAngle, aEndAngle, aClockwise) { + var deltaAngle = Math.abs(aStartAngle - aEndAngle); + // If start and stop are the same WebKit and Moz does nothing + if (aStartAngle == aEndAngle) { + // different browsers behave differently here so we do the easiest thing + return; + } + + var endX = aX + aRadius * Math.cos(aEndAngle); + var endY = aY + aRadius * Math.sin(aEndAngle); + + if (deltaAngle >= 2 * Math.PI) { + // if larger than 2PI + this.arc(aX, aY, aRadius, aStartAngle, aStartAngle + Math.PI, aClockwise); + this.arc(aX, aY, aRadius, aStartAngle + Math.PI, + aStartAngle + 2 * Math.PI, aClockwise); + // now move to end point + this.moveTo(endX, endY); + return; + } + + var startX = aX + aRadius * Math.cos(aStartAngle); + var startY = aY + aRadius * Math.sin(aStartAngle); + var rotationAngle = deltaAngle * 180 / Math.PI; // sign, abs? + var sweepDirection = aClockwise ? 0 : 1; + var isLargeArc = rotationAngle >= 180 == Boolean(aClockwise) ? 0 : 1; + + if (this.currentPath_.length != 0) { + // add line to start point + this.lineTo(startX, startY); + } else { + this.moveTo(startX, startY); + } + + this.currentPath_.push('A' + aRadius + ',' + aRadius + ' ' + + rotationAngle + ' ' + + isLargeArc + ' ' + + sweepDirection + ' ' + + endX + ',' + endY); + }; + + contextPrototype.rect = function(aX, aY, aWidth, aHeight) { + this.moveTo(aX, aY); + this.lineTo(aX + aWidth, aY); + this.lineTo(aX + aWidth, aY + aHeight); + this.lineTo(aX, aY + aHeight); + this.closePath(); + }; + + contextPrototype.strokeRect = function(aX, aY, aWidth, aHeight) { + // Will destroy any existing path (same as FF behaviour) + this.beginPath(); + this.moveTo(aX, aY); + this.lineTo(aX + aWidth, aY); + this.lineTo(aX + aWidth, aY + aHeight); + this.lineTo(aX, aY + aHeight); + this.closePath(); + this.stroke(); + this.currentPath_ = []; + }; + + contextPrototype.fillRect = function(aX, aY, aWidth, aHeight) { + // Will destroy any existing path (same as FF behaviour) + this.beginPath(); + this.moveTo(aX, aY); + this.lineTo(aX + aWidth, aY); + this.lineTo(aX + aWidth, aY + aHeight); + this.lineTo(aX, aY + aHeight); + this.closePath(); + this.fill(); + this.currentPath_ = []; + }; + + contextPrototype.createLinearGradient = function(aX0, aY0, aX1, aY1) { + return new LinearCanvasGradient_(aX0, aY0, aX1, aY1); + }; + + contextPrototype.createRadialGradient = function(x0, y0, + r0, x1, + y1, r1) { + return new RadialCanvasGradient_(x0, y0, r0, x1, y1, r1); + }; + + contextPrototype.drawImage = function (image, var_args) { + var dx, dy, dw, dh, sx, sy, sw, sh; + + // For Silverlight we don't need to get the size of the image since + // Silverlight uses the image original dimension if not provided. + + if (arguments.length == 3) { + dx = arguments[1]; + dy = arguments[2]; + // Keep sx, sy, sw, dw, sh and dh undefined + } else if (arguments.length == 5) { + dx = arguments[1]; + dy = arguments[2]; + dw = arguments[3]; + dh = arguments[4]; + // Keep sx, sy, sw and sh undefined + } else if (arguments.length == 9) { + sx = arguments[1]; + sy = arguments[2]; + sw = arguments[3]; + sh = arguments[4]; + dx = arguments[5]; + dy = arguments[6]; + dw = arguments[7]; + dh = arguments[8]; + } else { + throw Error('Invalid number of arguments'); + } + + var slImage; + + // If we have a source rect we need to clip the image. + if (arguments.length == 9) { + slImage = drawShape(this, '<Image Source="%1"/>', [image.src]); + + var clipRect = create(this, + '<RectangleGeometry Rect="%1,%2,%3,%4"/>', [sx, sy, sw, sh]); + slImage.clip = clipRect; + + var m = createMatrixIdentity(); + + // translate to 0,0 + m[2][0] = -sx; + m[2][1] = -sy; + + // scale + var m2 = createMatrixIdentity(); + m2[0][0] = dw / sw; + m2[1][1] = dh / sh; + + m = matrixMultiply(m, m2); + + // translate to destination + m[2][0] += dx; + m[2][1] += dy; + + transformObject(this, slImage, m); + + } else { + slImage = drawShape(this, + '<Image Source="%1" Canvas.Left="%2" Canvas.Top="%3"/>', + [image.src, dx, dy]); + if (dw != undefined || dh != undefined) { + slImage.width = dw; + slImage.height = dh; + slImage.stretch = 'fill'; + } + } + }; + + contextPrototype.stroke = function() { + if (this.currentPath_.length == 0) return; + var path = drawShape(this, '<Path Data="%1"/>', + [this.currentPath_.join(' ')]); + path.stroke = createBrushObject(this, this.strokeStyle); + path.opacity = this.globalAlpha; + path.strokeThickness = this.lineWidth; + path.strokeMiterLimit = this.miterLimit; + path.strokeLineJoin = this.lineJoin; + // Canvas does not differentiate start from end + path.strokeEndLineCap = path.strokeStartLineCap = + processLineCap(this.lineCap); + }; + + contextPrototype.fill = function() { + if (this.currentPath_.length == 0) return; + var path = drawShape(this, '<Path Data="%1"/>', + [this.currentPath_.join(' ')]); + // The spec says to use non zero but Silverlight uses EvenOdd by defaul + path.data.fillRule = 'NonZero'; + path.fill = createBrushObject(this, this.fillStyle); + // TODO: What about even-odd etc? + }; + + contextPrototype.closePath = function() { + this.currentPath_.push('z'); + }; + + /** + * Sets the transformation matrix and marks things as dirty + */ + function setM(self, m) { + self.m_ = m; + self.lastCanvas_ = null; + }; + + contextPrototype.save = function() { + var o = {}; + copyState(this, o); + this.aStack_.push(o); + this.mStack_.push(this.m_); + setM(this, matrixMultiply(createMatrixIdentity(), this.m_)); + }; + + contextPrototype.restore = function() { + copyState(this.aStack_.pop(), this); + setM(this, this.mStack_.pop()); + }; + + contextPrototype.translate = function(aX, aY) { + var m1 = [ + [1, 0, 0], + [0, 1, 0], + [aX, aY, 1] + ]; + + setM(this, matrixMultiply(m1, this.m_)); + }; + + contextPrototype.rotate = function(aRot) { + var c = Math.cos(aRot); + var s = Math.sin(aRot); + + var m1 = [ + [c, s, 0], + [-s, c, 0], + [0, 0, 1] + ]; + + setM(this, matrixMultiply(m1, this.m_)); + }; + + contextPrototype.scale = function(aX, aY) { + var m1 = [ + [aX, 0, 0], + [0, aY, 0], + [0, 0, 1] + ]; + + setM(this, matrixMultiply(m1, this.m_)); + }; + + contextPrototype.transform = function(m11, m12, m21, m22, dx, dy) { + var m1 = [ + [m11, m12, 0], + [m21, m22, 0], + [ dx, dy, 1] + ]; + + setM(this, matrixMultiply(m1, this.m_)); + }; + + contextPrototype.setTransform = function(m11, m12, m21, m22, dx, dy) { + setM(this, [ + [m11, m12, 0], + [m21, m22, 0], + [ dx, dy, 1], + ]); + }; + + /******** STUBS ********/ + contextPrototype.clip = function() { + // TODO: Implement + }; + + contextPrototype.createPattern = function() { + return new CanvasPattern_; + }; + + // Gradient / Pattern Stubs + function CanvasGradient_() { + this.colors_ = []; + } + + CanvasGradient_.prototype.addColorStop = function(aOffset, aColor) { + aColor = translateColor(aColor); + this.colors_.push({offset: aOffset, color: aColor}); + }; + + CanvasGradient_.prototype.createStops_ = function(ctx, brushObj, colors) { + var gradientStopCollection = brushObj.gradientStops; + for (var i = 0, c; c = colors[i]; i++) { + var color = translateColor(c.color); + gradientStopCollection.add(create(ctx, + '<GradientStop Color="%1" Offset="%2"/>', [color, c.offset])); + } + }; + + function LinearCanvasGradient_(x0, y0, x1, y1) { + CanvasGradient_.call(this); + this.x0_ = x0; + this.y0_ = y0; + this.x1_ = x1; + this.y1_ = y1; + } + LinearCanvasGradient_.prototype = new CanvasGradient_; + + LinearCanvasGradient_.prototype.createBrush_ = function(ctx) { + var brushObj = create(ctx, '<LinearGradientBrush MappingMode="Absolute" ' + + 'StartPoint="%1,%2" EndPoint="%3,%4"/>', + [this.x0_, this.y0_, this.x1_, this.y1_]); + this.createStops_(ctx, brushObj, this.colors_); + return brushObj; + }; + + function isNanOrInfinite(v) { + return isNaN(v) || !isFinite(v); + } + + function RadialCanvasGradient_(x0, y0, r0, x1, y1, r1) { + if (r0 < 0 || r1 < 0 || isNanOrInfinite(x0) || isNanOrInfinite(y0) || + isNanOrInfinite(x1) || isNanOrInfinite(y1)) { + // IE does not support DOMException so this is as close as we get. + var error = Error('DOMException.INDEX_SIZE_ERR'); + error.code = 1; + throw error; + } + + CanvasGradient_.call(this); + this.x0_ = x0; + this.y0_ = y0; + this.r0_ = r0; + this.x1_ = x1; + this.y1_ = y1; + this.r1_ = r1; + } + RadialCanvasGradient_.prototype = new CanvasGradient_; + + CanvasGradient_.prototype.createBrush_ = function(ctx) { + if (this.x0_ == this.x1_ && this.y0_ == this.y1_ && this.r0_ == this.r1_) { + return null; + } + + var radius = Math.max(this.r0_, this.r1_); + var minRadius = Math.min(this.r0_, this.r1_); + var brushObj = create(ctx, '<RadialGradientBrush MappingMode="Absolute" ' + + 'GradientOrigin="%1,%2" Center="%3,%4" ' + + 'RadiusX="%5" RadiusY="%5"/>', + [this.x0_, this.y0_, this.x1_, this.y1_, radius]); + + var colors = this.colors_.concat(); + + if (this.r1_ < this.r0_) { + // reverse color stop array + colors.reverse(); + for (var i = 0, c; c = colors[i]; i++) { + c.offset = 1 - c.offset; + } + } + + // sort the color stops + colors.sort(function(c1, c2) { + return c1.offset - c2.offset; + }); + + if (minRadius > 0) { + // We need to adjust the color stops since SL always have the inner radius + // at (0, 0) so we change the stops in case the min radius is not 0. + for (var i = 0, c; c = colors[i]; i++) { + c.offset = minRadius / radius + (radius - minRadius) / radius * c.offset; + } + } + + this.createStops_(ctx, brushObj, colors); + return brushObj; + }; + + function CanvasPattern_() {} + + // set up externs + G_vmlCanvasManager = G_vmlCanvasManager_; + CanvasRenderingContext2D = CanvasRenderingContext2D_; + CanvasGradient = CanvasGradient_; + CanvasPattern = CanvasPattern_; + +})(); + +} // if diff -r 99e223f6a132 -r 6eac08f7edcf static/scripts/packed/excanvas.js --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/static/scripts/packed/excanvas.js Fri Aug 22 17:44:32 2008 -0400 @@ -0,0 +1,1 @@ +if(!window.CanvasRenderingContext2D){(function(){var L;var N={init:function(d){var e=d||document;e.createElement("canvas");if(/MSIE/.test(navigator.userAgent)&&!window.opera){var 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1 0

[hg] galaxy 1480: dbkey must be set after _metadata column is in...
by greg＠scofield.bx.psu.edu 27 Aug '08

27 Aug '08

details: http://www.bx.psu.edu/hg/galaxy/rev/6de3006c62b3 changeset: 1480:6de3006c62b3 user: Dan Blankenberg <dan(a)bx.psu.edu> date: Mon Aug 25 15:28:57 2008 -0400 description: dbkey must be set after _metadata column is initialized in the init of HDA, or else the dbkey is clobered. 1 file(s) affected in this change: lib/galaxy/model/__init__.py diffs (14 lines): diff -r b671c301674a -r 6de3006c62b3 lib/galaxy/model/__init__.py --- a/lib/galaxy/model/__init__.py Fri Aug 22 17:47:43 2008 -0400 +++ b/lib/galaxy/model/__init__.py Mon Aug 25 15:28:57 2008 -0400 @@ -112,9 +112,9 @@ self.blurb = blurb self.peek = peek self.extension = extension - self.dbkey = dbkey self.designation = designation self._metadata = metadata or dict() + self.dbkey = dbkey self.deleted = deleted self.visible = visible # Relationships

1 0

Test is at rev 1533:c77dea3e745a
by Greg Von Kuster 27 Aug '08

27 Aug '08

1 0

Test is at rev 1524:96f8ed6d89cc
by Greg Von Kuster 26 Aug '08

26 Aug '08

1 0

Test is at rev 1523:e68dbb8f6b4c
by Greg Von Kuster 26 Aug '08

26 Aug '08

Thanks, Nate!

1 0

Main is at rev 1476:77f8bf51b2ae
by Greg Von Kuster 22 Aug '08

22 Aug '08

1 0

[hg] galaxy 1477: Fix for dataset_metadata_in_file validator: al...
by greg＠scofield.bx.psu.edu 22 Aug '08

22 Aug '08

details: http://www.bx.psu.edu/hg/galaxy/rev/99e223f6a132 changeset: 1477:99e223f6a132 user: Greg Von Kuster <greg(a)bx.psu.edu> date: Fri Aug 22 11:22:44 2008 -0400 description: Fix for dataset_metadata_in_file validator: all locally cached data files that are columnar must have columns separated by tabs characters, not white space. I've eliminated the 'split' param from the validator as it was causing problems. Extract genomic DNA tool should now finally work correctly. 2 file(s) affected in this change: lib/galaxy/tools/parameters/validation.py tools/extract/extract_genomic_dna.xml diffs (37 lines): diff -r 77f8bf51b2ae -r 99e223f6a132 lib/galaxy/tools/parameters/validation.py --- a/lib/galaxy/tools/parameters/validation.py Fri Aug 22 10:39:58 2008 -0400 +++ b/lib/galaxy/tools/parameters/validation.py Fri Aug 22 11:22:44 2008 -0400 @@ -235,18 +235,17 @@ metadata_name = metadata_name.strip() metadata_column = int( elem.get( "metadata_column", 0 ) ) message = elem.get( "message", "Value for metadata %s was not found in %s." % ( metadata_name, filename ) ) - split = elem.get( "split", None ) line_startswith = elem.get( "line_startswith", None ) if line_startswith: line_startswith = line_startswith.strip() - return cls( filename, metadata_name, metadata_column, message, split, line_startswith ) - def __init__( self, filename, metadata_name, metadata_column, message="Value for metadata not found.", split=None, line_startswith=None ): + return cls( filename, metadata_name, metadata_column, message, line_startswith ) + def __init__( self, filename, metadata_name, metadata_column, message="Value for metadata not found.", line_startswith=None ): self.metadata_name = metadata_name self.message = message self.valid_values = [] for line in open( filename ): if line_startswith is None or line.startswith( line_startswith ): - fields = line.split( split ) + fields = line.split( '\t' ) if metadata_column < len( fields ): self.valid_values.append( fields[metadata_column] ) def validate( self, value, history = None ): diff -r 77f8bf51b2ae -r 99e223f6a132 tools/extract/extract_genomic_dna.xml --- a/tools/extract/extract_genomic_dna.xml Fri Aug 22 10:39:58 2008 -0400 +++ b/tools/extract/extract_genomic_dna.xml Fri Aug 22 11:22:44 2008 -0400 @@ -4,7 +4,7 @@ <inputs> <param format="interval" name="input" type="data" label="Fetch sequences corresponding to Query"> <validator type="unspecified_build" /> - <validator type="dataset_metadata_in_file" filename="alignseq.loc" metadata_name="dbkey" metadata_column="1" message="Sequences are not currently available for the specified build." split="\t" line_startswith="seq" /> + <validator type="dataset_metadata_in_file" filename="alignseq.loc" metadata_name="dbkey" metadata_column="1" message="Sequences are not currently available for the specified build." line_startswith="seq" /> </param> <param name="out_format" type="select" label="Output data type"> <option value="fasta">FASTA</option>

1 0

[hg] galaxy 1476: Better fix for interval_maf_to_merged_fasta wh...
by greg＠scofield.bx.psu.edu 22 Aug '08

22 Aug '08

details: http://www.bx.psu.edu/hg/galaxy/rev/77f8bf51b2ae changeset: 1476:77f8bf51b2ae user: Greg Von Kuster <greg(a)bx.psu.edu> date: Fri Aug 22 10:39:58 2008 -0400 description: Better fix for interval_maf_to_merged_fasta when no strand column in input, added functional test. 4 file(s) affected in this change: test-data/13.bed test-data/interval_maf_to_merged_fasta_out3.fasta tools/maf/interval_maf_to_merged_fasta.py tools/maf/interval_maf_to_merged_fasta.xml diffs (716 lines): diff -r 973d6cbeea87 -r 77f8bf51b2ae test-data/13.bed --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/13.bed Fri Aug 22 10:39:58 2008 -0400 @@ -0,0 +1,96 @@ +chr16 20682314 20682813 ENSG00000005187 +chrX 123339504 123340003 ENSG00000009694 +chr3 52503897 52504396 ENSG00000010327 +chr6 112089190 112089689 ENSG00000010810 +chr6 112089249 112089748 ENSG00000010810 +chr6 112089261 112089760 ENSG00000010810 +chr2 31310208 31310707 ENSG00000013016 +chr22 16598265 16598764 ENSG00000015475 +chr22 16598139 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ENSG00000091972 +chr15 40483770 40484269 ENSG00000092529 +chr15 40427094 40427593 ENSG00000092529 +chr15 40481381 40481880 ENSG00000092529 +chr15 40457707 40458206 ENSG00000092529 +chr15 40438491 40438990 ENSG00000092529 +chr1 120055534 120056033 ENSG00000092621 +chr1 120063274 120063773 ENSG00000092621 +chr6 159106769 159107268 ENSG00000092820 +chr6 159106768 159107267 ENSG00000092820 +chr6 159106766 159107265 ENSG00000092820 +chr9 111041832 111042331 ENSG00000095203 +chr9 110974075 110974574 ENSG00000095203 +chr10 94822723 94823222 ENSG00000095596 +chr10 94823138 94823637 ENSG00000095596 +chr10 29005931 29006430 ENSG00000095739 diff -r 973d6cbeea87 -r 77f8bf51b2ae test-data/interval_maf_to_merged_fasta_out3.fasta --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/interval_maf_to_merged_fasta_out3.fasta Fri Aug 22 10:39:58 2008 -0400 @@ -0,0 +1,480 @@ +>hg18.chr16(+):20682314-20682813 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+GTCTGGGTCAGAGGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCCTCCTAGTAACGCACTGCCTTCCCAGCCTACTAAAACTCTGCTGTGTGTACAGATCATTACCTGTAATAAGACAGGCCAGGGTT-ATGTAAACAT----------TCACGCTCCTCCCACCAA-TATATCCACCAATTAAGGAAAGCACTGCCGGCCAGTCTGACTCCTCC + +>hg18.chrX(+):123339504-123340003 +CTACTGATTAGTAGTTTTGTTTTTTTTTTCTTTCCTCCCTCAAGCTTTAGGAGTTGTAAAAAGAATAATAATAGTTCAAGGCAGTATTAAAACCACAGCTGTAAGTAATAAAAAGTGCATTTCCTGAATATAATACAAATGTAACTTTAACAAACTAAAGGCACGAACCAACCAAATACGTATTACAAACTAGAAATGCACAGTTCAAGGTAATCACTATTAAGTAAAAGCTTCAAATATTTGTTTCTAATGGATATTTAAAGCAGTTTGAAAATGATACATCATCAATGAATTGCAAAAACGTATAATTGCTTAAAATATAAGCAAAATAGACTCTAATATTGACATTTTGGATTTGTGATAAAATACATAATCACATTTATGAATGCACTCTCTATATACAGTTCACAAATTATTTTTCCATTAATTTAAAAGAACATCAGAGGTTCTAGGAACTTAAGGTCCATTTTTAGGTTGGTGTGGAGGTATTCAAATTTTC +>mm8 +CAACTTGTTA-TACCTTTTTTTTTTTTTCTTTTCCTCCTCAAAACTTTAGGAGTTGTAAAGAGAACAATAATATTTCAAGGCAGTATTAAAACCACAGTTGTAAGTGATAAAAAGTGCATTTCCTGAATATAATACAAATATAACTTTAGGTAACCAAAGGCACAAACTAACTAAATACATATTACAAACTAGAATTGCACAGTTCAAGGTAATTACTATTAAGGAATAGTTCCAAATATTTCTTCCTAATGAATATTTAAATCGGTTTGAAAATGATACATCACTAGTGAGTTGCAAAAGAGCGCAATCACTTAAAATAGAAGCAAAATAGGCTCCAAGATTGACACATTGGGTTAGTGATAAAATAC---ACCACATTTAAGAATGCACT-TTTATGTACAGTTAACAAATTATTTTCCTATTGACTTCAAAGAATGTCAGAGGTTCTAGGAACTTAAGATCTATTTTTAGGTTGGTGTGGAGGTATTCAAATTTTC + +>hg18.chr3(+):52503897-52504396 +CGGGCAGGACCAGCGGCTCAGGAGTGGCTGGGGCTAGTGAGGGGATGTGGGTCTGGTGGGCTAGCAGGGTGCCTGTAGCGAGTCAGAGCCCCATGAGCGCCCTGGAGTTGGAAAGGTGGAGGCAGGAACAGACAGACCCATTCAGGGGCTGCCCTGCCTTCCGCCGACCAGCACCCCAGGAGCCTCTGAATGAAACACACTGGGCTCGCAGGCGGGGGACTCGTTCACGTGTGCCTTTGGATTTGCTTCAGAACCTCTGATAGAGCCCAGGTCCCGGGGCTCATGGTGGCCTGGACTTCCAGGTTGTGATGCCAGGAGGGTCCCAGCCGGGAAGCCCCGAGCAGGGCTCAGGCCGCCCATGGGGGGTCAGTGGCCAGCACCTTCCCTTCCGCCTGCAGGCTGCTGATATGCAGGAGGAAATCCTGGCGGGTTCCTGTGGGGGTGAGCTGGCGGGGCCTCCGGGCTGCTTTTAAGGCCACTGCCCGCCCCGTCCCGCCTG +>mm8 +--------------GGCTCAGGAAGGCCTGAGGCTGGT-AGGGGAGACCAGTCTGAGGGGCTAGCATGGTGTTTCCACC------------------TCTACTGGTGTCTGAAAGACTGAGGCAGCTGGGGGCCAGCCAGCCCAGGGGCTGTCCAACCTCCTAGGCACCAGAACCCCGA-AGCTTCTGAATG-AAAAAGCCAGCTTGACAGATGGGAAAATTATTTATTGGTGC--TTAAATTTGCTTTAGAATCTCCCCTAGACCCCAGG-CAGGTGGCTAATGGTGGTCTGGACCTCTAGACTATGGTGCCAGGGAGGTCCTGGCCAGGAAGCCCTGAACAGGGCCCAGGTCGTCCATGGGGGGTCACTGGCCAGCGTCTTCCCTTCCGCCTGCAGGCTGCTGATACGCAGGAGGAAATCCTGGTGGGTTCCTGTGGGGGTGAGCTGA---------CGGATAGCTTTTAAAGCGGCTGCCCACCCTGTCCTGCCT- + +>hg18.chr6(+):112089190-112089689 +AAACATGAAAAAAAATTTTATTGTTTTAGACAAAGAGGCCACTTTTGGAAAATAATACTTTTTTTTTTTTAGTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCATTTTTAAAAAAGGAAAGCACTAGGATTGTTGGCACTGGAGTAACTATTTACACTGAACAGAGGTTTGGCCTTTTACATAACATCGATACAATGCATTTTCCAAAGTCTGAGAAATAACAAGGTTCTGTCTCGAATGCTTCACAGAGGAGGTTCGGATTTGGGGACAAGTGTCATTAATGAGGGCCATGGAAGTTCGTCAGCTTCAGAGTCACATGCAATCTGATCCTGGGCGGTTCCGCTGCTGGGGAGCAGCTGGCTACGGAATTGAAAGCTAATGGGGAGGGGTGGGGCAGCCTCTGGGACAAGGCCTCTCTCCGCAGACCCGGGCCTTACAGGTTTTCACCAGGTTGGTACTGGGGCTCTGTCGCGGTAAAGTAGTCTTCC +>mm8 +AAACATGAAAAAAAATTTTATTGTTTTAGACAAAGAGGCCACTTTTGGAAAATAATACTTTTTTTTTTTTAGTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCTTTTTTAAAAAAGGAAAGCACTGGGATTGTTGGCACAGGAGCAGCTATTTACACTGAACAGAGGTTTGGCCTTTGACATAACATCGATACAATGCATTTCC--AAGTCTGAGAAATAACACGCTTCTGTCTCAGATGGTTCACAGAGGAGGTTCGGACTGGGGGACAAGTGTCATTAATGAGGGCCGTGGAAGT---TCAGCTTCAGAGTCACATGCAATCTGATCCTGGACGGTTCCGCTGCTCTGGGGCAGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTC-GGGAAGAGGC----GTCTGAAGCGCAGGCTCTCACAGGTTTTCACCGGGCTGATACTGGGGCTCTGTGGCCGTAAAGTAGTCCTCC + +>hg18.chr6(+):112089249-112089748 +TTTTTTTTTTTAGTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCATTTTTAAAAAAGGAAAGCACTAGGATTGTTGGCACTGGAGTAACTATTTACACTGAACAGAGGTTTGGCCTTTTACATAACATCGATACAATGCATTTTCCAAAGTCTGAGAAATAACAAGGTTCTGTCTCGAATGCTTCACAGAGGAGGTTCGGATTTGGGGACAAGTGTCATTAATGAGGGCCATGGAAGTTCGTCAGCTTCAGAGTCACATGCAATCTGATCCTGGGCGGTTCCGCTGCTGGGGAGCAGCTGGCTACGGAATTGAAAGCTAATGGGGAGGGGTGGGGCAGCCTCTGGGACAAGGCCTCTCTCCGCAGACCCGGGCCTTACAGGTTTTCACCAGGTTGGTACTGGGGCTCTGTCGCGGTAAAGTAGTCTTCCAGGAAGCTCTGCAAGTACTCAAAAGTGGGGCGTTCTTCAGGGTCCTTTTTCCAGCAGTG +>mm8 +TTTTTTTTTTTAGTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCTTTTTTAAAAAAGGAAAGCACTGGGATTGTTGGCACAGGAGCAGCTATTTACACTGAACAGAGGTTTGGCCTTTGACATAACATCGATACAATGCATTTCC--AAGTCTGAGAAATAACACGCTTCTGTCTCAGATGGTTCACAGAGGAGGTTCGGACTGGGGGACAAGTGTCATTAATGAGGGCCGTGGAAGT---TCAGCTTCAGAGTCACATGCAATCTGATCCTGGACGGTTCCGCTGCTCTGGGGCAGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTC-GGGAAGAGGC----GTCTGAAGCGCAGGCTCTCACAGGTTTTCACCGGGCTGATACTGGGGCTCTGTGGCCGTAAAGTAGTCCTCCAGGAAGCCCTGCAAGTACTCGAAGGTCGGGCGCTCTTCCGGATCCTTTTTCCAGCAGTG + +>hg18.chr6(+):112089261-112089760 +GTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCATTTTTAAAAAAGGAAAGCACTAGGATTGTTGGCACTGGAGTAACTATTTACACTGAACAGAGGTTTGGCCTTTTACATAACATCGATACAATGCATTTTCCAAAGTCTGAGAAATAACAAGGTTCTGTCTCGAATGCTTCACAGAGGAGGTTCGGATTTGGGGACAAGTGTCATTAATGAGGGCCATGGAAGTTCGTCAGCTTCAGAGTCACATGCAATCTGATCCTGGGCGGTTCCGCTGCTGGGGAGCAGCTGGCTACGGAATTGAAAGCTAATGGGGAGGGGTGGGGCAGCCTCTGGGACAAGGCCTCTCTCCGCAGACCCGGGCCTTACAGGTTTTCACCAGGTTGGTACTGGGGCTCTGTCGCGGTAAAGTAGTCTTCCAGGAAGCTCTGCAAGTACTCAAAAGTGGGGCGTTCTTCAGGGTCCTTTTTCCAGCAGTGGATCATGAGCTC +>mm8 +GTTGAATCAGGTGAAGACAGAGTTAAAATCACATAGGATTTGCTTTTTTAAAAAAGGAAAGCACTGGGATTGTTGGCACAGGAGCAGCTATTTACACTGAACAGAGGTTTGGCCTTTGACATAACATCGATACAATGCATTTCC--AAGTCTGAGAAATAACACGCTTCTGTCTCAGATGGTTCACAGAGGAGGTTCGGACTGGGGGACAAGTGTCATTAATGAGGGCCGTGGAAGT---TCAGCTTCAGAGTCACATGCAATCTGATCCTGGACGGTTCCGCTGCTCTGGGGCAGCTGGCTACAGAATTGGAAGCTAATGGGGAGGGGTAGGGAGGCCTC-GGGAAGAGGC----GTCTGAAGCGCAGGCTCTCACAGGTTTTCACCGGGCTGATACTGGGGCTCTGTGGCCGTAAAGTAGTCCTCCAGGAAGCCCTGCAAGTACTCGAAGGTCGGGCGCTCTTCCGGATCCTTTTTCCAGCAGTGGATCATGAGCTC + +>hg18.chr2(+):31310208-31310707 +AAGCAGGGAGTGTGATGAATAGGTCAACTCTGTCCTCGCAGCCGTCCCTGAGAGGGCGCTGTTCCCAAATCGAAGCCCCAGAGGCGGAGACTGAGACACCGGCACTCTCCCACTGGACTGGGTCAGCATCCCTCTCCCCGCGCGGCCGCAGGTCTAGAGCTGAGCGCCTGCCCACAAACATGGCGGCGCCCTGCGCGGCTTCCCGTCGCCGCAACCGTGGGGCCGGCCCTGCCTTGCCAGTACTAGGGGACTTCCTCTGCGCGCCGGCTTCCTGCCCAGCTGGCATTTAAACCACCGCCTGGGGCTGCAGGATGCTGCTGCGGATGCAGAGCTGTCCGCGGGCTGGGCAGCGTCGCCGTCTCCCCTGAGCCGCCTCGGTCCGGCAGGAGCGGAGCCGAAGCATCCCTTGCTGCACGCAGGGCAGAGCAGGCGAGGGCTGGGGGCCGATCGGGGACCCCGGCTTGGGACCCCGGCATCTGGCAGTTTCCTTGCAGGTTCA +>mm8 +AAACAGAG-----------TAGGTCAAGGCTGTCTTAGTCTCCGTCCTTGAGAGGGCGCTGCTCCCAAGTCAAATCCCCAG-GGCTGGGAAAGAAATGCCTGCGCTTTCCCACAGGACTCTGGCAGCAGCTTTTTGCCCGCGCGGCCGCA-----------GAGCGCCTGCCCATAGACATGGCGGCGCCCTCCTTGGCTTCGCGTCGCCCTGACCGTGGAGCTGGCCGGGTTTTGCCAGTTCTCGGGGACTTCCTGCACGT-----------------CTGGCATTTAAACGCGCGCCGGGGGCGGCGGGATGCTGCTGCGGATGCGGAGCTGTGTGA------------GCCGCTGCCTACCCGGCGCAGCCTGGGCTCCGCAGTAGCGGAGCTCGAGCATCCTTTAGTC-----------------------------ATCTATCTGGGGA----GACCTGGAACTCAGGCTT----CGGCTTCCCGGCAGGTTTG + +>hg18.chr22(+):16598265-16598764 +GGGCTCCGTCTACACTGGAAGCAGCTATACAGCTGTGACCACATCGAGCTTTAGCCAGTCACACTTCTGGAACTGTCCGTTCAGTCCATCCCCTAGAGCAAGAAAGGAGAAAAAGCCAGAATCAGCTAGGCTCATTCACAAACCAGGCTCCAGAGCTCTGTGCCACAGTAGAGCAAAGCTGGGGTTTATGCAAAAACATGTTCTCCAGACCCCTGAAGTCCTATCCGTGCATCCTACTTTTTGCTACATGGGGGCAACTGCAAAAACAGGCCGTTCAGGCGGTGAGGTGGGTATTCACATCTCCAAGGCACTGACGGTGTCAGGAGGCCCCTGCTGGGTCAGAGGAATCACGATTCTGCCTCAGCCCTCAGTCTCTGGTAAGCTGTCCATACAGACTGCTGCACACGTCTTGCCCACCCTTTCCCCCTTTACATGGGTGTTGGTAAAAGCTGTCCAGGAATGGTCTCAGGCTTACCTCCTTCCAACAATTCAGCTGGGT +>mm8 +TGGTCGCGGTTCCTCTGGAGGCAGTGTCACCA--------------------------TCGGGCTTGTGCGGGC-TCC--TCAGTCCATCTCCTAAGAAAGAGG---------CAGCAGAGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr22(+):16598139-16598638 +GACATTTTCATTCAAGTATATTAATGTAGATATTTTAAAGTGGGTTATAAGTTTAACATTGTCTTTAAAATAGAAGTCACAGCTATCTTCCAGCCTGTCTTCTCTAGGAACGCTGTTGACATGCCAGGGCTCCGTCTACACTGGAAGCAGCTATACAGCTGTGACCACATCGAGCTTTAGCCAGTCACACTTCTGGAACTGTCCGTTCAGTCCATCCCCTAGAGCAAGAAAGGAGAAAAAGCCAGAATCAGCTAGGCTCATTCACAAACCAGGCTCCAGAGCTCTGTGCCACAGTAGAGCAAAGCTGGGGTTTATGCAAAAACATGTTCTCCAGACCCCTGAAGTCCTATCCGTGCATCCTACTTTTTGCTACATGGGGGCAACTGCAAAAACAGGCCGTTCAGGCGGTGAGGTGGGTATTCACATCTCCAAGGCACTGACGGTGTCAGGAGGCCCCTGCTGGGTCAGAGGAATCACGATTCTGCCTCAGCCCTCAGTC +>mm8 +GA---------------------ACGCAGAGA-TGTCCAGTGAATCACCAGCTTGGCCACCACCTGGAAATAGGAGA--CAGCTGTTCTCTGGCCTGTCTTCAGGCCAAGGTCTTTC-------CATGGTCGCGGTTCCTCTGGAGGCAGTGTCACCA--------------------------TCGGGCTTGTGCGGGC-TCC--TCAGTCCATCTCCTAAGAAAGAGG---------CAGCAGAGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr22(+):16596941-16597440 +CCACACTGCGCGGCAGCACTTCTTTTTAGTATTTGTAAGCTTTTGCCCACTTTCAATTGAGCCAGCCCTAGCGTGGTATGTATTGCATGCTGAACAATATAGAGTTTGTTTTTCCTTTCTGATGATTTTAAACTCTTAAAGAACAGGAAAGCATCTGGTAAGAAGAAATCATGAGTCCGTCAGTGCCCTTACTCATATGCGTCTCCAGTGGCCTCATGTTGTGGTCACAGGAGTTTCCTGTTCACAGCAATGTGTGTGATATGGACCCAGCATCCACTGTCGTGCTTTTAAACTGATTCCTGGGACATAGCTTACCACTGGAACAGCAGACCAGTGTTGCACTGTTTCTAAAGCTAAGCTTTTCCTTATTTATTTTGGTACTACCTAAGTGACTTGGTTTTGACTGTCCCTAAGAGAGGGAACCACTTTGCTGAATTTTTAAAAAGTCCAACTGCTCTTTCATCTTTTATGCTTAGAAACCTGTTCTCTCCAGATGCAC +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr22(+):16596908-16597407 +GTGTTAGGAAGATTTATTTCCAAACAGTGGCCTCCACACTGCGCGGCAGCACTTCTTTTTAGTATTTGTAAGCTTTTGCCCACTTTCAATTGAGCCAGCCCTAGCGTGGTATGTATTGCATGCTGAACAATATAGAGTTTGTTTTTCCTTTCTGATGATTTTAAACTCTTAAAGAACAGGAAAGCATCTGGTAAGAAGAAATCATGAGTCCGTCAGTGCCCTTACTCATATGCGTCTCCAGTGGCCTCATGTTGTGGTCACAGGAGTTTCCTGTTCACAGCAATGTGTGTGATATGGACCCAGCATCCACTGTCGTGCTTTTAAACTGATTCCTGGGACATAGCTTACCACTGGAACAGCAGACCAGTGTTGCACTGTTTCTAAAGCTAAGCTTTTCCTTATTTATTTTGGTACTACCTAAGTGACTTGGTTTTGACTGTCCCTAAGAGAGGGAACCACTTTGCTGAATTTTTAAAAAGTCCAACTGCTCTTTCATCTT +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr12(+):101335726-101336225 +CATTTTCCTTTTTTGCCTCTGCATTCAGCATTTCTACTTCCAATCTCCCTCCTCTGCTCTTTCTTCTTTCCTCTGATCTGCAGACTTGCTTCTGTCCCCTCCTTCTGTTCCCctcctggatgtgtctttggccaacctttccttctctgagacttcgtgttcttgttggtagatgggggctgatactgtaaacatcacaaaaataATTGCATTGAGAACAAGTGGTTCCCATGGTGTCCCTTTGAATGAGCTCAGAATGCCCAGGCTCCATATGATGCAGGAGACAGCACTCATGCTGGAGAGGGGTCTAGACCTCAGTCACAAGACCCACCATTCCAGAACTTTGGGACTCATCTCTTGACACCTACCCCCTCCCCAGTTAGAAACCAAGAGGCGCTGGGTCACCTGGGAAGAGAAAGAATGAATCTGCCTTTGCCCCAGCAAGCACGCTTTCCTGCCACATTCACCTAAAAGTCTTTTCTGAGATCCTTGCTTCCTG +>mm8 +--ATGTCCCTCTTTGCCTGCTTGCTCACAGTTCCTAGC-CCAGTCTTTTTTCTCTG----------GGACCTCTGATTTTCCGAGTTGCCTCCGTTACCTCCTCCTGTTCCCCTTCTGGGTGTGTCTTTGGCTCACCTTTCCTTCTCTGCAGCTTCGTTTTCTTGTTTGTCGATAGGGACGGGGACTGCAAACATCACAAAAATAATTGCATTGAGAACGGGTGGCTCCTGTG-----TCTTTGAATCTGCCCAGAATGCCTGGGCTCCATAGGAAACAGAAGCTAGCTTTACTGCTGGAGAGGGTTCTACACCTCAGGCACCAGAGCCGAGGTGCCCGAGCTTTGCGCCTTATCTC-TAATACCCACTTCCTCTTCAGCT---------------------------AGAAGGAACA---------------------------CTCCTTTTCCCTTAATTTGCACAGTGATATCCTTTCTGACTCTTGTGCCCACCG + +>hg18.chr12(+):101320236-101320735 +ATCACTCCTAAAGACAATGTTGGAATGTTTACTTGTGTATTTCATTGGGGGAAACGCCCATCTTTTAAATGTTATCAAACTTATTTTTTGGTAGGTGTTCCAAAGTTTAACAGGTAACTCGTGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTTGCGTTCTTCAAATGTACTTCCTATAAATAAAGGAGAAAAAGTGACATTAACTTGATGAAGTTTTATGTATCCATCTATTTCTAACATTGGGCCTCAACCTTCCATGTCTTACGCCTTACCAGTTGAGCTAATAGAGAGCTTGAACCTTGGTTTTCCTGAGAAGGGCATGTATAGGTGGACAGGCCCTTAGTACTTTTGCCAAACCTCACTCAGGCATCTTCTATGTACCCCTGGTGGCGTGAATACCACAGACAGCTTTATAATCACACAAAGATGAGATT +>mm8 +AGCACTCCTAAAGACGATGTTGGAATGTTTACTTGTATATTTCATTGGGGGAAATGCCCATCTTTGTAATGTTATTGGACTTATTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGC--AGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCCTACATTCTGTAGGTCTTGTTTCCTGCACTTCCTCTACTTGTGTTCTTCAAATGTACTTCCTGCAAATAAGAAAGATAAGCGGCCATTAAGTTGTTGTGGTTTTCTATATCCAT----TTCTAACACTGGCCCTCAGCCTTTTGTATCTTATGCCTCACCAACCTATCTTAAGGAGGGTTTGAGTCTTGAATTCTTTGAGAA----ACATACAGATGGTCAGGTCTTTAGTTAATTCAACCAAACTTGACCTGGCT--CTAGGAGCACCCA---TAGCATAGGTACC----ATTGCTTCATAATTACACCAAGAGGCTACC + +>hg18.chr12(+):101320163-101320662 +TTTTCTATAGAACATTATTGATAAAAGATCAACAGCAATCTACCAACTCCAGGACCATTTTTGCAAGGTGCAAATCACTCCTAAAGACAATGTTGGAATGTTTACTTGTGTATTTCATTGGGGGAAACGCCCATCTTTTAAATGTTATCAAACTTATTTTTTGGTAGGTGTTCCAAAGTTTAACAGGTAACTCGTGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTTGCGTTCTTCAAATGTACTTCCTATAAATAAAGGAGAAAAAGTGACATTAACTTGATGAAGTTTTATGTATCCATCTATTTCTAACATTGGGCCTCAACCTTCCATGTCTTACGCCTTACCAGTTGAGCTAATAGAGAGCTTGAACCTTGGTTTTCCTGAGAAGGGCATGTATAGGTGGACAGGCCCTTAGTACTTTTGCCAAACCTCA +>mm8 +TTCTCTATAGAATGTTATTGATAAAGGACCAACAGCAATCTACCCACGCCAGGACCACTTTTGCAAGGTGCAAAGCACTCCTAAAGACGATGTTGGAATGTTTACTTGTATATTTCATTGGGGGAAATGCCCATCTTTGTAATGTTATTGGACTTATTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGC--AGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCCTACATTCTGTAGGTCTTGTTTCCTGCACTTCCTCTACTTGTGTTCTTCAAATGTACTTCCTGCAAATAAGAAAGATAAGCGGCCATTAAGTTGTTGTGGTTTTCTATATCCAT----TTCTAACACTGGCCCTCAGCCTTTTGTATCTTATGCCTCACCAACCTATCTTAAGGAGGGTTTGAGTCTTGAATTCTTTGAGAA----ACATACAGATGGTCAGGTCTTTAGTTAATTCAACCAAACTTG + +>hg18.chr12(+):101313809-101314308 +ATTACTAAAGAAAGATATACCATTTTATTATGACACTCTAGCCATACATTTTCAAAATATGCTTATTAAACAGTAAATGTAAGATAATGATTCAATTAGTTACATTTTTAGAAGTCATTAGGATTGATATTCCTCTGCCATAAGTGAATTGAATAATAATTTCAAATACAATCAGaattaatttaataaaaaatatGCTTTTCAACTAAGACAGATGTAACGAATGGCCAGTCATTATTTTCTGGTTTCAAAGTAGCAGGGGAAATTAATTCAGTGTCTGTAAGTTTATTTATCACACTTGGCCTATAAGTGTGATAAAAATACATGAGGCAAAATACATGATGTAATCCCAATTCTCATAGTTCATTAACTCTTTTACCAAAAAGATCTGACATGGTATTTGGGGCCTTTATGTAAACTGAATATAAGCTGCGTGATATTTGAAAGGTTTTGATATTTTGAATAGACATTTTCATGATACACAGACACAGATAAAAGA +>mm8 +ATTACTAAAGAAAGATATACCATTTTATTATGACACTCTAGCCATACAATTTCAAAATATGCTTACTAAACAGTAAATGTAAGATAATGATTCAGTTAGTTACATTTTTAAGAGTCATTAGGACAGATATTGCTCTGCCATAAATGAATTGAATAACCACTTCAAATACAATCAGGAGTAATTTGATAGAAGATTTTTTTTTGTG-TAAAACACATACAATGAATGACCAAATATTACTTTCAGGTTTC-----AGTAGGG-AAATCAATTCAGTGTCTGTAAGT-TAATCATCACCCTTGGCCTTTAAGTGTGATAAAAATAAATGAAGCAAAATGTGCGTTGTAATCCAGATTCCCATAGCTCCTTAAATCT-TTAACAAAGAGATCTGATATGCTATTTGGAGCTTTCCTGTAAACTTAATATACACTGTATGATGTTTGCAAG----------------------GTTTAAGGATACAGAGACACCGATAGGAGA + +>hg18.chr7(+):99282701-99283200 +TTCTGCTTTGCACAACCCTGGAGGAGTTGCTAGGTCTTGTTCCCATCTATTCTACTGGAAGAACTGGTTCTCTTCCACGTGGAAACCATGCATTTAAAAGGAAACTGGGATATAGTGACTGGAAACCACACCATTTGCCTTGATTCCACCATCCCCCTTCCATATGCTTACAGGAGGCTACACATTCAAGATAAATCTTTATTGagcatctagtatagagcctgccacccagtagatagttactaaatatttgttaaattcatgaTGCCTGTTTAACACATTTTCTACAACTATGGAGATCTCTAAAACTTACGTAGGACAAACTGCTTCTGCTTTGAACTCAAGCCTTTAGGTCCAATGGGATTTCTGAAAAGTGCCTTAAGTTTTGCTGAAGATGAAGAATGGAAGAGAATACGAACATTGCTATCTCCAGCTTTCACCAGTGTAAAATTCAAGGAAGTAAGAAAATAAGGTGATTTATAATTAGAAACTTAAAGGA +>mm8 +TCTTTTTTTGCAAATGCTTGAAAGACACTGCAGGGCTGG--CCTAT----TCTCATGGA-------------TTCTGCAAGGGCGATTTTCATTTAAAGTGAGATGGTCATAGAAAGATGTGAAGCTGTGCCAGATGGATAGATATCACCTTCA----TTTATAGGATTACAGAAATTTTCA--------GTAGAAGATTGTTGAACATCTAGTA-AGATCCAGAAAATT-----ATAGT-----AATGTTTGTTAAATAAATGATGCTTGTTTAATATACTTTCTAAAATTGTGAAGATTATCATAATTTTAATATGATAACCTTCTTTCCATTTGAACCTTAGTTTTTTGGGCCAGTGGGATTCATGAAAAAGGCCATTACCATATCTGAGGATGAAGAATGGAAGAGACTTAGAACACTCCTGTCTCCAACCTTCACCAGTGGCAAACTCAAGGAGGTGATTAGAGAGGGTGTTC-----------ACTTAAGGAA + +>hg18.chr7(+):99263073-99263572 +gctttctaaaaagaattatttttatttgggaataaagcattgcaatgggaatatgcgtgccaaggtaaactatgtgcttattcaggtaggtaaagtaagacaaagtttaaaaaaataatgagaaggattacatatttgttttggaatgattatccttggctataaagatcaataacaagactgacatcagtttgaggttggacaggcagttgctgggcagatgttcttgcagaagtatttttctttaggttCCTGAGAATCTATAACCTTTGGGCTTACCAATAGCAGTGACTGATTTGTTTACTGATTGTTCACAGAATAGGAAATCAAAGGAGGCCAAAATAAGGACAGCCATAATTATTTGCCAATTGTCAATTTGAAAAGGGTACCCAAATCCCTCCATATGAGGAGTAGCATAAGTGGCTTTTCTACTGGCTGCCGCTGTAGACCCACCTCCTTCTCCAGCACATAAATATCGCTGTTAACATTAACTAAATCA +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGAATATAAGCTCAAAGG---TCAGAGTAAGAAAATGCATGACCCTTTGACAAATGCCAGGTGAGAAGCCACACCAGACCTACAAGTT--CGAGCATTGTGCAAGTGGCCCTTGTACTGGCTGAATCCCTGTAACCTCCTCCTTTCCCAGCAAATAA-----ATAGACTGGCCTCACTAGATGC + +>hg18.chr19(+):38013262-38013761 +ACATCTGAGTATATTTTATTCGTAAGAAAAAAAGGAAGAAATAACCACAAATATTGCTTAAGAAAATAAATTCAGCTGACTTGGCTACAAGAGACGGAGCTTGTTACTCAGGGTCTTCCTCCGGTGGGACCACTTCCATTAGCATCTGAAGGTGCATGGTAATCGGCTCTGAAATAAGAGTCAAAAATGAGTACAGTTAGTTAGACTGAAATTCGAAAGTTTCACTGGAGTTGTTGTGGGTGAGGGTGACATTGTTTTCAGTCTTTGGTGATGCGTCACCTAGACCCTGTGCTCAGGATGGCCAGCTTTCCTGCCTTCTGGTTGGATTTCACACTTTCCTGGCTTCTGTCTTCTCCCAGAATTGCAGGAATAGAAATAAAAACCTCCTAGGAGTGTCCGGAGGGACGACTGCACTTTCCAGTTCAGATGAGCTGAACAGGAGAAACAGGCAGGCTTTTAATCACATTCACTTAATAAATCTTAACTGGCTGTTACAGGC +>mm8 +ATATCTGAATACATGTTTTCATTAAGAAAAACAGGAAGAAATAACCACAAATATTGCTTACAAAAATAAATTCAGCTG----GGCTACGAGTGATGGA-CCTTTTACTCTGGGTCCTTTTCTGGTGGGACGACTTCCATGAGCATCTGCAGGTGCTTTGTGACCGGCCCTGGAACAGAAGCGAGGCATAGGTGCAGTTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAACCACAGTCACTCAGTTAACACTAAGTGGCTGTAGTGCAC + +>hg18.chr3(+):52206685-52207184 +CAGGACCACTCCATTTGTGGGCGATATAGCCAGCTCCACCTCCTCCGGGAAGCCCTTGTTCACAGTTTCCAAAGCAAGCCGCAGGCGGGATGGATCCTGCTTAACACCCCGGCCCAGAACCCCTTGGATCTCCTTCTTCCTCCATGTCCAAGACACCCAGCTTAACAACCCTGTAGCCCCCAACTTGGCCCTAGCGGCACCTCGCCTCGACCTTGCCATTTTATACTCAATTGGGGCGTAGGGTTCTGAAGCCCAGGGTAGTTGGTGGGGAGGCAGCACGAGGGTGCAGGATGAGGTCGGGAAAAGAGACCTCGTCCGCCCACCGCCTAGCGCTTCCTCCTCCCTGCAGGCGAGCCGGGGAATCCCCGGCAGCACCGATATCCGCAGAGCCCAAGAAGTGGGCCTCTCTGCCCCGCCCCCCCGGCTCGCCGAGGGCTACGCGGCGCGCCTGCGCAGAAGAAGGCAGCGCCCAAGGCGCATGCGCAGCGGTCACTCCCGC +>mm8 +CTGGGCCATTATATTCTTGGGCCATCCATCCA-------TGCAGCAAAGAAG--GTCTGTCATCGAAGCAAAGGCAAGCCCTTCGTTGATCGGAT----CTTAAGACCCTGGCCCGAAA-CCC------------CTTCCTATATGCCCAATAAACCCA-TTT-------TTTTAGCCTGTAG-ATTTCCCCGGGTGGGGTTGGTTTCGACCT--------------CAGCGGGGGCGCAGGAGTCTGACGCATAGGGCTGTTCG-TAGAAGGAGACAAGGGACGAAGGGAAGGGATCCAAA-AAGGGACTTGCCCCGTCCACCGCCCTGCGCTCTTGGCTCC------GGCAGCGTAGG-----CCTGAGACATAGTCAGTTGGAGAGGAACAGAGAGGGACCCTGGCACCTTGCCGGGCCGGCTTC-----GG------CGCGCGCGTGCGC-GCGGCAGGCCGCACCCAAGGCGCATGCGCGGCGGTCACTCCGGC + +>hg18.chr3(+):52206657-52207156 +TGAGTGTCCCGCTTCTTCCGCATCCTGCCAGGACCACTCCATTTGTGGGCGATATAGCCAGCTCCACCTCCTCCGGGAAGCCCTTGTTCACAGTTTCCAAAGCAAGCCGCAGGCGGGATGGATCCTGCTTAACACCCCGGCCCAGAACCCCTTGGATCTCCTTCTTCCTCCATGTCCAAGACACCCAGCTTAACAACCCTGTAGCCCCCAACTTGGCCCTAGCGGCACCTCGCCTCGACCTTGCCATTTTATACTCAATTGGGGCGTAGGGTTCTGAAGCCCAGGGTAGTTGGTGGGGAGGCAGCACGAGGGTGCAGGATGAGGTCGGGAAAAGAGACCTCGTCCGCCCACCGCCTAGCGCTTCCTCCTCCCTGCAGGCGAGCCGGGGAATCCCCGGCAGCACCGATATCCGCAGAGCCCAAGAAGTGGGCCTCTCTGCCCCGCCCCCCCGGCTCGCCGAGGGCTACGCGGCGCGCCTGCGCAGAAGAAGGCAGCGCCC +>mm8 +TGGGCTCCCTTCTTCCGCAGCCTCTCTCCTGGGCCATTATATTCTTGGGCCATCCATCCA-------TGCAGCAAAGAAG--GTCTGTCATCGAAGCAAAGGCAAGCCCTTCGTTGATCGGAT----CTTAAGACCCTGGCCCGAAA-CCC------------CTTCCTATATGCCCAATAAACCCA-TTT-------TTTTAGCCTGTAG-ATTTCCCCGGGTGGGGTTGGTTTCGACCT--------------CAGCGGGGGCGCAGGAGTCTGACGCATAGGGCTGTTCG-TAGAAGGAGACAAGGGACGAAGGGAAGGGATCCAAA-AAGGGACTTGCCCCGTCCACCGCCCTGCGCTCTTGGCTCC------GGCAGCGTAGG-----CCTGAGACATAGTCAGTTGGAGAGGAACAGAGAGGGACCCTGGCACCTTGCCGGGCCGGCTTC-----GG------CGCGCGCGTGCGC-GCGGCAGGCCGCACCC + +>hg18.chr10(+):101532011-101532510 +TATATAACATATAGGCTCACACTGGATAAGCTATTTTATAACCTGACTTCTTCAAAGAAAGTTTACATCATGTTTAAACCATGTTTTAGATTCTATATTTTTAATTAAAAATCTAAGGAAGAAGGATATTTCACATTTCTATAAACTCTAAGATCTTGCAGCAGAAGCGAAACTGCACATTTAGGGGTGCCTGCCCCTCTACTGATGCTGCCCTTTGTGGGTCATATGTCCTTAGGAAAATGAAAGACTGTGCACTCTTGATTTGTTGGCCAGCTCTGTTGACATCTTTCAGTGGTTCCTTTTATGTATGGCCACTCCTACAGAGGCCTCTTGTACTTTGGGAACTGGTGAGTCTCCCTGTCCCTAGGGCTTTTTAGTCACATGTCCATCCACTGTTTCAATGTAACATGCATCTAGGCAAGGTTAACGATTAAATGGTTGGGATGAAAGGTCATCCTTTACGGAGAACATCAGAATGGTAGATAATTCCTGTTCCACT +>mm8 +T-------TCATTGATCCACAATGCTTTCGCTCTTTTATAACTTGACTTTTTCAAACAAAGTTTATATTAC-TTTAAACCGTGTTTTATGTTTTAAGTTCTTAATCAAAA----AACTCAGAGGGGTATTTAACATCTCTGTGAACTCTTAGAGTTC-AAACTGAAGTAAAACCCCACATGCAGGGATGCATAGGTTGTGTACTGGACT-TCCGACCT--------------------------------------------------GCCAACTGCATTAATGTCTCTGATTGGTTCTTTCTAGATTTGGTCACA-CTACAGGGGC----AGGGCTTTGAGAAGTGATAAGCCTCCCAGTATCTGGTGATTCCCAGTCACATGTCTGCTCACTGGGATGACATAGCATTCATC-TAGCAAAGTTAACTATTAAGTTGTCAGGATGAAAGGTCAGCCTTTAATCAG----TGAGGATGGAAAGCAATTGCTCATCTGCT + +>hg18.chr10(+):101531994-101532493 +TGAAAGCCTGTATTATGTATATAACATATAGGCTCACACTGGATAAGCTATTTTATAACCTGACTTCTTCAAAGAAAGTTTACATCATGTTTAAACCATGTTTTAGATTCTATATTTTTAATTAAAAATCTAAGGAAGAAGGATATTTCACATTTCTATAAACTCTAAGATCTTGCAGCAGAAGCGAAACTGCACATTTAGGGGTGCCTGCCCCTCTACTGATGCTGCCCTTTGTGGGTCATATGTCCTTAGGAAAATGAAAGACTGTGCACTCTTGATTTGTTGGCCAGCTCTGTTGACATCTTTCAGTGGTTCCTTTTATGTATGGCCACTCCTACAGAGGCCTCTTGTACTTTGGGAACTGGTGAGTCTCCCTGTCCCTAGGGCTTTTTAGTCACATGTCCATCCACTGTTTCAATGTAACATGCATCTAGGCAAGGTTAACGATTAAATGGTTGGGATGAAAGGTCATCCTTTACGGAGAACATCAGAATGGTAG +>mm8 +--------CAAATTATGT-------TCATTGATCCACAATGCTTTCGCTCTTTTATAACTTGACTTTTTCAAACAAAGTTTATATTAC-TTTAAACCGTGTTTTATGTTTTAAGTTCTTAATCAAAA----AACTCAGAGGGGTATTTAACATCTCTGTGAACTCTTAGAGTTC-AAACTGAAGTAAAACCCCACATGCAGGGATGCATAGGTTGTGTACTGGACT-TCCGACCT--------------------------------------------------GCCAACTGCATTAATGTCTCTGATTGGTTCTTTCTAGATTTGGTCACA-CTACAGGGGC----AGGGCTTTGAGAAGTGATAAGCCTCCCAGTATCTGGTGATTCCCAGTCACATGTCTGCTCACTGGGATGACATAGCATTCATC-TAGCAAAGTTAACTATTAAGTTGTCAGGATGAAAGGTCAGCCTTTAATCAG----TGAGGATGGAAA + +>hg18.chr5(+):71651457-71651956 +CCACCCCAACACATAAATCTGGCGAATCATACGCAAATTCCCTCATGCTATATAACCTTCCACTGCTCTTCGTACCTTTGGACAGGAACATACTGTTATTTTAGGGAAGGAAATGGATCAGATACCTTGTCTCCTTCTTCTGCACTACCAAACACCCCAAATGGCGTCCCTAGCAATCAGATTCCAGAAACGTTTCCTCTCCTCTTGAAAGCCCACCGCTCCCTTCACCCAAAAAACAGAATAATCAGGGGCCTAATGAAGCTGTCCGGCCAACCTGCAGGAGAGAGCTGAGGAAGAACCACTTGCCGCGCCAGGAGCATCCCGCGCCGCACTATGGAGGCAGCCATCTTGGAGCGTACCAAAAGGAACAGCCAACGGGTTACGGACAGAGGAAGGGGCGGGGTTACAGCTCGACCTCTCGGGGCGCCCAGAATTGGACGAATCCCTTTTGTCGCTCTCGACGACAGGACCGACGCTCCGCCTCCTCGCCCCGGTTCCA +>mm8 +CTAATTTAATACATTAAACTTGCAAGACATACGCAGA--ACCTCATGC--TACAGCCTTCCCCTACTTTTCAAAAGTTTGGAATGGCGGGTACTAGCCTT-----AAAGAAGAGGGA---------TTATTTTTCCTTTCTGGGTT-ACCAATACCCTAAACGGCTTCTCTAGCAACCGGATCCCAGACGCACTTATGCGCTTCCTGGAAGCCCATCACCCCCTTCCTTCAATAAACAGCGTGCTGGGAGGCCTAATGGAGCTGCACCACCAACCTGCGAGGCAAAGGCGAGACGCGTCTAGTCGCCGAGCCAGGAGCATCCCACACCGCACCATGGGAGCCGCCATCTTGGAGCGCACCAAGTGGA----------AGGCGGGCGTGGG----GGGACAGGCACAGAGCCCGCCTCCGC--------CGGAAGTGGTCCTAC---------CACCTCAGA-G----------------GTCCCCCCTGCCCGGGTCCC + +>hg18.chr3(+):52796382-52796881 +TCCGTCCCCTGAGCCGCCCTTCTCCACATCACCGCGAACTCCCTGCTGCGCTTTGTGAGCTTTTGTGCAGGCTGAACCCCCAGCAGCCTCCACTGGTCCCCTCTTGGTGTGAGTGTATGTCTGTGAGGAGGCAGGACCCCAGGGGAGGGCTGAGACCCCCAGAGGGACGGCTGGGCCCAGGCCTGTTGTGGACAGAGCTGCATGCCTTTCGTGTGGGGCACCGTGGGTGACACTGTCTTCGATAATATGTCCTTGTCTTCTACAGAGATGCTGGGACCCAGAAGGAGTAAGTGGCAGCCATCCTGGCCATTCACATCTCTACCCCTCCTTGATGATCACCCCGTTGGCTTTCTTCCTCCGTTCTAGCTGTCTTCACTGCTTGTCACTGGGAATCTTTAGAACAGACCTCTGAACAGCCTGGCCTCCCCAGCCTGAGGTCCCTGGGGGAGGAGACAGAGAGGGGGCCAGCTAAACATGCCAGGCCAAGCTTCTGTCCCCG +>mm8 +TCTG-------------------------------AATCTCAGGGCTGTGCATCACGAGCCTTT-----GCCTTCCCTCG----GGTCTCCATCAAGCCCCTCTCCCCG---GTGTCTATCTGAG-GAAGTCGAGGGCATTTGAGAGGGCTGAG-CCTACAGTAGTTCATCT----CTCACCCTGTTGAGGAGTGAGCTACATGCCCTGGAGGTGGGGTATC-AGAGTAACAGTGTTT-----------TCCTTGTCTTTTGCAGAGATGGTGGGACCCAGAAGAAGTAAGTGGTAGCCATCTTGGGGACCCCCTTCTTCACCCCTTCCTCCTACTTACCCTGTTGGCTAGCTAGCTCTGCCCTGGCTATCACTAGCTCTGGTTCCTGGGATTCCTTAGGACAAGCCTCCGTACAGCTTGGCTTTCCCAG-----GGTCCCCATTATAAAAGACATA--GGAGGCCAGGTCATCTCCTAGGACCAAACTTTTGTACCCA + +>hg18.chr3(+):52786149-52786648 +atcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcactgagccaagatcctgccactgcactctagcactcaagaccaaaactccatctcaaaaaaaaaaaagtaaaGCCTAATGAAGTTTAGAAATCCATTTTTAACTGTTGCTTCTTGCCACATGTCACCGTGTCACTGGTGCTGCCTTGTGCCAGCCCGAGGATGAGATGAGCCATCCGGGGATCCTCACAGTTCACATAGGCTAAGCGCAGTTCTACACAGAGGGACATGGTCTGGAGCCCCATCAGTAGTTTAACCACCCAGAGCTGGGAACCCCCCTGAGGCAAAAAGCTTCCACTGCCAAATTTTGATTCCTCTAAATGTGttaggttgatgcaaaagtcattgcggtttttgtcattaaTATTTGCCTGCACCTTGTCTAATGTTTAATCCATGTTTATCCAGCACTGTATTGATTACTGGTCTGACTGAGGTGA +>mm8 +---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTGCCTCCGCTGTGTCTAATGTTTAAACTGTGTTTGTCCAGCACAGTATTAACTAACAGTCTGAGGGAAGTGA + +>hg18.chr6(+):166698400-166698899 +ACAAATATTTAAATCATTTATTGCCATTAAGTTACAGCATCTCAATATATACACTGCATGGAAATACACAGGTAACATTTTTAAACAGTGGGGACAAAATTTTAAGTACGTGGCCAGCTGTTGGTTGTCTTGTGGTCATTAAAGACAATGTTAAGAATCAGGAGTACTTAAGTGCTAGTGGTTACAAATTTTGTTCTCTTCAGTTTTTCATTAAGTAAATTCTAATAGATGATATACATATTACTGCAGATAAAACCATCATCAGAAATTATTAAATTAATTGCATATTTTGAGCTACTCTTTATGGAAAGAAGTAAAATATTTAATACTTGTAAGGCAGCAGAGAGTTGGTTTAGAAACTCTCAGCTATTTCTATAAAAATAGAATGGTTAGTAAAAATAGCATTCAGTGTATTTTCCTTAGGGAGGCTATTTATAATGAAATCTGTGACTCAGCAGCAGCTGGCAATGCTGTCCCTTCAAGACCTTGTTCTTCCTTT +>mm8 +GCAAATATTTAAACCATTTATTGCCATTAAGTTACAG-ATCTGAGT-TACA-----TATGGAAA-ACACCGAT---ACTTGTTATCACTGGAAATTATG-TGTAGACATGTGACCAACTGAGGGTT-TACTATTGTCATTAAAGAAAAAGTCAAGAATTTTGAGTACTTAAGTGCTTGTAGTTATAAATTTTGTTCCCTTAGATTTTTTATTACACAAATCCCAATAGATAATATACATATTACTACAGATAAAACCATCATTCAAAATTATTAAATTAGTTGCATATTTTGAACTACTCTTGATGAAGACAAATAAG--GTTTAGCATTGATAAGGCAGCAGAGAGTGGGTTTAGGGACTCTCGGCTAT-TCAATAATGTTGGCATGGTCATT-AAGATAGCATTCTGTGTTTTCCCTTCAGCACGACTACTCATGCTGAGATCTGTGGCTCAGCAGTGGCTGG-AGCACTGTCTCTTCAAGAGCTGGTCC------T + +>hg18.chr6(+):166698708-166699207 +AAGAAGTAAAATATTTAATACTTGTAAGGCAGCAGAGAGTTGGTTTAGAAACTCTCAGCTATTTCTATAAAAATAGAATGGTTAGTAAAAATAGCATTCAGTGTATTTTCCTTAGGGAGGCTATTTATAATGAAATCTGTGACTCAGCAGCAGCTGGCAATGCTGTCCCTTCAAGACCTTGTTCTTCCTTTTCCATTGTTATGCAGATGCCGTTTTAGTCATCCTGGAAAGAAACAAAAAGAAAAATTCAATGAGAAACAAAATTTCAATGCCAATCGCAAGGGCTTTGGATGGCTTTTAAAAGACACCTTTACATAACATTTATTTCAACTTACAACTTATAAAAACAATAATATaggttgggtatccctcatctgaaatgcttaggcccagacatgtttcagattttttcagatttcggaataactggattataccagttgaacatccctaaactgaaaatccaaaatccaaaatgctccaatgagcacttcctttg +>mm8 +GACAAATAAG--GTTTAGCATTGATAAGGCAGCAGAGAGTGGGTTTAGGGACTCTCGGCTAT-TCAATAATGTTGGCATGGTCATT-AAGATAGCATTCTGTGTTTTCCCTTCAGCACGACTACTCATGCTGAGATCTGTGGCTCAGCAGTGGCTGG-AGCACTGTCTCTTCAAGAGCTGGTCC------TTGTACCGCTATGCAGATGGCCGCTTACTCATCCTGGAAATAATT--GGAGACAATTTCAATGAGACACAAAGTCTA-CCGCCAGTCCCAGAGGCTCTGCATGGCTTTAGAA-GACAAGTTTCTATAACATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr16(+):2029817-2030316 +CATCTGCAAACACACCAAAGCTTTATTCAACAGGCGTGGCTTCCTGAAGCGTAAAGCCACTTCACAGACGGTGGCCACAGCGGCACCTCGGCCAGAGCCATGCGGCCATCAGAGACCCTGGGCGGCCGGGCAGAGGGCTTGGTTGAGGCAGGCGTGGCAGCGAGGGTGCACAGGCAGACAGGTCTGCTGGCCGAAGCCCACCAAGAGTCCATTGATCTCGTGCCACAGCTCCCTGTGGGGGTGGGGGCTGGGTCAGTGCTGACAGAGGGCGGGCGGGGTGAGCTCTTCTCCCTAGGAAGCCCCCCACATACTCATACCTAGGCAGCCACTCCTCCAGGGCGGCGCGGGTCTCCTCTGGGGACTTGGTTGCCTTCTTGGTCCACCTCAGCCTGTTGGCGATTCTGTGCACATGCGTGTCCACTGCTGCTGGGAGGCCAAGCGGGGTGAACAGGGGCACACTCCACCAGCCTAGCCCGTGCCCCTCCCCGCCCAGAGGCGA +>mm8 +CAGGTGCAAACACCCCCAAAGTTTACCACCCCGCC---------------------------------------CCACAAAGGCACCTCAGAGGAAGCCCTATGGCCCTTAGAGATCCTGGGCAGCAGGGCACAGGGCCTTGTTGAGGCAAGCCTGACATCGAGGATGGACAGGAAGACAGATCTGTTGGCCGAAGCCTACCAGTAGTCCGTTGACCTCACTCCACAGCACCCTGTGAGGGTAAGAGAAAGGTCAGT-------GTGGATGACAGCAGGACACCTCCCTCCCCCAAGCTCACCAAGCTACACTGTACCTGGGTAGCCACTCTTCCAAGTTCTTACGTGTCTCTTCTGGGGTCTTGGTCATCTTCTTGGTCCACCTCAGTCGGTTGGCTATTCTGTGCACATGTGTGTCCACTGCTGCTTGGAGACAAGGCAGGCTGACC--AAGGGCACTCTGCCAG-CTGGGCTGTGTCCCCCCCGGTCCTAAGGTGT + +>hg18.chr10(+):126075862-126076361 +ACATTTGAAATATAAGCTTTATTTTAAATTTAAAGAAGTATTGAAAATAAACATTTTTTACAAATTATAATCAAGCACTCAAAACAATTTAGGAATGTTAAACACTAATTCTTAATTCAAAATAATGACATCCATAGAATACAACCCTGGTGTTGGCCAATATGAAGTTTACTTAATATTAGTATTTTATATACACTTAACCATTAATCCTTCCTAAAATTCAATAACAATGATTTCACTTTATAAGATGAAGCCTTTTATGCAATACCCAGAGATAACTTTTTCAAATATGAAACACTTATACCAGTGAGGAAATTATAAAAACATATATCAATTATACTGAAGGACTTGATTTAGAGGCTGTCTGTATATAGATGCATTTCACCTTAGGAAGTACACATGCACATCAAAACACTTCAACTGAATATAGATGCCATTACATTATTTAGTTACGTTACAAAGCAAACGGCAGGTTCATAAACGTTGTTCTATTATGTAT +>mm8 +-AAAAGAAACATTAAGCTTTATT-------CAAAGAAATACTGAAAATAAA--TGTTTTACAAATTGCAATCAAGC----AAAGTGATTTAGTAATG---------AATTCTCAGA-------------ATCTATATAATAC-ATTCTGGTGTTGGCCAATGAAAAGTTTACTTTAAACTAGTATTTTACATATGCTTAACCTTCAATCA-ACTTAACATTCATTGATAATGATTTAAC------------TGTTC----TGTAGTACTCAGAAATAACTTCT--AAATACAAACCATTCACATCAGCAAGGAAACTGTAAAGACGCACGTAAAT--GACTGCAGGCCTCCATCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCA----CACAGTCAAACCTCAACAA---AGAGACGCC-TCTCGCTCTACTTTTCTGTCACGCAGCCACCTGCAGGTTCCTAGGTGTCACTCTATTATGCAT + +>hg18.chr10(+):126075869-126076368 +AAATATAAGCTTTATTTTAAATTTAAAGAAGTATTGAAAATAAACATTTTTTACAAATTATAATCAAGCACTCAAAACAATTTAGGAATGTTAAACACTAATTCTTAATTCAAAATAATGACATCCATAGAATACAACCCTGGTGTTGGCCAATATGAAGTTTACTTAATATTAGTATTTTATATACACTTAACCATTAATCCTTCCTAAAATTCAATAACAATGATTTCACTTTATAAGATGAAGCCTTTTATGCAATACCCAGAGATAACTTTTTCAAATATGAAACACTTATACCAGTGAGGAAATTATAAAAACATATATCAATTATACTGAAGGACTTGATTTAGAGGCTGTCTGTATATAGATGCATTTCACCTTAGGAAGTACACATGCACATCAAAACACTTCAACTGAATATAGATGCCATTACATTATTTAGTTACGTTACAAAGCAAACGGCAGGTTCATAAACGTTGTTCTATTATGTATCAACTGA +>mm8 +AACATTAAGCTTTATT-------CAAAGAAATACTGAAAATAAA--TGTTTTACAAATTGCAATCAAGC----AAAGTGATTTAGTAATG---------AATTCTCAGA-------------ATCTATATAATAC-ATTCTGGTGTTGGCCAATGAAAAGTTTACTTTAAACTAGTATTTTACATATGCTTAACCTTCAATCA-ACTTAACATTCATTGATAATGATTTAAC------------TGTTC----TGTAGTACTCAGAAATAACTTCT--AAATACAAACCATTCACATCAGCAAGGAAACTGTAAAGACGCACGTAAAT--GACTGCAGGCCTCCATCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCA----CACAGTCAAACCTCAACAA---AGAGACGCC-TCTCGCTCTACTTTTCTGTCACGCAGCCACCTGCAGGTTCCTAGGTGTCACTCTATTATGCATCAACTGA + +>hg18.chr10(+):123223889-123224388 +AATTTATAAATCTGTAAGTGTCCTCTGTCCCTTTCAAAGAACCTCATGCTATGGATTTTAACTAGTAAGAGACACCAGCAAGCGTCAGTTAAGTGTCCTCTGTCCCTTTCAAAGCACCTCATGCTATGGATTTTAACTAGTAAGAGACACCAGCAAGCATCAGTTAAGTGTCCTCAAAAGAGAATTAgaggctgggagcagtggaatggcttgaacccaggaggcggaagttgcagtgagcctagatcatgccattgcactccagcctAAAAAAGAATTAGAAGAGGAAAAGAAACCTAAAAGGAGTGCAGCCCAAAAGGAGGCAGTGTTCTGAGCTGCAGAAGGAAAAAATCACCTACCCATATGTGCACGGTAAGCTGAATTCAGTCACTGAACAGCTTCATGTGCTGAGGTATCCCTTTGTAAATTGTATTTCAAAGGTCCGGAGCGGATGGTTCCCCAGTGCCGGACATTGAATGCCCTCCCATCCACTGACTTC +>mm8 +-----------------------------------------------------------------------------------------------------------TTCCAAGTCCATCATGCTATAGAGTTTGACTTACAACTGATACAGGCAAAATTCACTCAAGTACTCCCA--------------------------------------------------------------------------------------------ACAAAGGAACTGCAAGAGGACCAAGAACCTGAATAGA---CAACCCAGGAGGACACAGGGTTCTTTG-TGGAGAAG--CAAAGTCACTTGTCCACATATATATTTTAAACTAAACTTTATCTCTGAACTACTCCGTGGCCTAAGGCTCCACTTAGGTAA---TATT----TGGC-----------ACTGTCTGTATG-------TCCACTG----TCTGTACTGTGCCTCT + +>hg18.chr10(+):123227846-123228345 +AGTTGCGTGACATTTATTTTGTCTTGTTAACATTAATATCTGTAGAAACATTTTTATTGTCAGTATAAAAATTAACAGGTTTTATTAAATACTTTCTCCAATTTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGTCTGATGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCAATCCCTTAAAAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGGCTAATCTGATTAATGTGCAACTCAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTAT +>mm8 +AGCTGCGTGACATTTATTTTGTCTTGTTAACATTAATATCTGTAGAAACATTTTTATTGTCAGTATAAAAATTAACAGGTTTTATTAAATACTTTCTCCAATTCCAAAACACATAAAATCAGTGTAATCTGCATACATGTCGCATGACTGTAGCAAAGTGAGTGGGCGTATCCAAAGCAAA--ACAATACTTGAATACGAAATCAACAAAAGCGTTATCTTGTCGGATGTAGCTATTAGGCCAGATCTTTTGGTGAGGTCTTGTCAGAAGTAGCCAGAAGCAAACCCTTAAGAAGATGGAAGGAGGTCCCAGACTCTCAACCGAATGATGCTGTTTTGCCATCCTTCGAGAGGA----TGGAGATTCCCCAAAGGGCTCTTGGTGCTGAAGAATCT-GAAGCTGTTATTAAAACTCACTGAGA---AGCAAGGCAAACGTGATGAATGTGTAACCC--GGGCAGAAGGCCAGCTGCCGGACG-AGA-GGACCCTGCTAT + +>hg18.chr10(+):123229123-123229622 +GTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATAAATCTTTACACATATGCTGATTACTTTTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTGGATACTGAGGAAGGCATGGTTCGTAAGGCATGGGGTCTGGAGAAAAAACAGAATCATCTCCTGAAGAACAAGAACTTCTTGTGTCAGGGTAACTAGGTGAATACTGTTCGAGAGGTTGGCTGAGGTCCAAGTATTCCTGAAAGAAGGGAAGAGAGACGTTTTATTTCATCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGAA +>mm8 +GTGGCATGGTGGCTTGCGGCTGTCCACTTATCAGGAAACAGTCTTCCTTTCCTGGTTAGG-TAACATGTTTCCAACTGTATAAATCTTTACACACGTGACAAATATGCTTCCCACTATTTACTCCTCTGATCCATATATACAAGTGGAGGCGACAGGCTCT-GGAGGCACAGCCTCTCTGCTCAGTGTAAGTAGGTTCCTGGTGCTGTCCTGTTTGGGGACAGGAAGACACATTCACTCATGTTTTAACACTGCCGTTTATGTGTGGATACTGAGGCAGACAGGGTTCATAAGGCATGGGGTCTGGAGAAAACACAGAATCGTCCCCTGAAGAACAAGAGCTCCTTGTGTCGGGGTAACTAGGAGAATACTGTTCGAGAGGCTGGGTGAGATCCAAGTATTCCTGCAAGAAGGGAAGAGAGACGTTTTATTTCACCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGCA + +>hg18.chr10(+):123229361-123229860 +CATGTTTTAACACTGCCGTTTATGTGTGGATACTGAGGAAGGCATGGTTCGTAAGGCATGGGGTCTGGAGAAAAAACAGAATCATCTCCTGAAGAACAAGAACTTCTTGTGTCAGGGTAACTAGGTGAATACTGTTCGAGAGGTTGGCTGAGGTCCAAGTATTCCTGAAAGAAGGGAAGAGAGACGTTTTATTTCATCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGAAAGAAGGGAAGAGAAGAGTTTTATTTCAAACACAAACTCTTGAGATGTGGGTATTGGACGTGGGACAGGACAGGAGACCCCTAGAAGGTGAACAGAGACCCAGCCCACCTGACTTCCACGAAGACCTCCCTGAGACCACGTCTGATGTACCCCAGGCTGTCCTTAGCTTTTCTCTTGGAATCCATCATAAATCAACTATTGACAGGTAGAGAACAATAAAACCTAGTTGAGCTATAGGT +>mm8 +CATGTTTTAACACTGCCGTTTATGTGTGGATACTGAGGCAGACAGGGTTCATAAGGCATGGGGTCTGGAGAAAACACAGAATCGTCCCCTGAAGAACAAGAGCTCCTTGTGTCGGGGTAACTAGGAGAATACTGTTCGAGAGGCTGGGTGAGATCCAAGTATTCCTGCAAGAAGGGAAGAGAGACGTTTTATTTCACCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGCAAGAAGGGAAGAGAAGAATCTCATTTTAAACAGAAGCTCCTGAAAAATCTCTATCAGATTTGGGAAGGGACGGGGAACCCCCGGAAGCTTTCCAGAGGCCTAGCTCACCCCAGTG-TACAAAGACCTCCCTGATACCCCACTCCATTCACTCCAGGCTACCCTGAACTTTTCTCTTACGACACAGCATCTATAAACCACCAGCAGGCAGCAGACCATAAAACATAG-TGAACTGCTGGT + +>hg18.chr10(+):123229555-123230054 +CATCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGAAAGAAGGGAAGAGAAGAGTTTTATTTCAAACACAAACTCTTGAGATGTGGGTATTGGACGTGGGACAGGACAGGAGACCCCTAGAAGGTGAACAGAGACCCAGCCCACCTGACTTCCACGAAGACCTCCCTGAGACCACGTCTGATGTACCCCAGGCTGTCCTTAGCTTTTCTCTTGGAATCCATCATAAATCAACTATTGACAGGTAGAGAACAATAAAACCTAGTTGAGCTATAGGTGCTGGGCAGGCAACTCGGCTTCACACGGACCTAAATAACCCGCTGAGTCTACACCACCTCCTCACTAGAGCCCTTGCTTCAAATGCGAGCCCCAGCAAAATGAAAACCGGTAACATGTTGTGGGTCCCCAGACCCCCTTTAAGTAGTTGAGACTATGAATATTTATTTTCTGAATTACATTTTACTATTGTAGT +>mm8 +CACCTTGGGTCAGGATAACAAGGTGAATACGGTTCGAGAGGCTGACTGAGGTCCAAGTATTCCTGCAAGAAGGGAAGAGAAGAATCTCATTTTAAACAGAAGCTCCTGAAAAATCTCTATCAGATTTGGGAAGGGACGGGGAACCCCCGGAAGCTTTCCAGAGGCCTAGCTCACCCCAGTG-TACAAAGACCTCCCTGATACCCCACTCCATTCACTCCAGGCTACCCTGAACTTTTCTCTTACGACACAGCATCTATAAACCACCAGCAGGCAGCAGACCATAAAACATAG-TGAACTGCTGGTAGCAGGTTGCCCACTCTGCTACA---GGACCTCGGTGACCCACTATAT--ACAGC-CCTCTTCACTACGGCTCACAATCGGAGTTTAAGACCCAGTGAAGT--AAACCCAG-----------------CAGGA-CCCTTTACAAAGCCAGGAC-ATGAATATGTATTTTCGGAATCACATTCTACAGTTGTCAT + +>hg18.chr10(+):123231339-123231838 +ttttattttttttttttttgagacggagtctcgctctgtcgccaaggctggaatgcaatggcatgatctcggctcactgcaacctccgcctccccggttcaagtgactctcctgcctcagcctcccggagtagctgggattacaggtgcacaccaacacgcccggctaattttttgtatctttagtagagacagggtttcaccatgttggccaggctggtctggaactcctgacctcatgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagccactgcgcctgaccAACTTTTCCCAGTTTCTCAATGAAGCCATAAACTTTCAGATCTGATAGGAAAAAAACAGGGATATCAGTAGATTCCAAGTCTACAGTTAAAGGAACTTATACTAGAAACAACAATTTTGGCAGAAGAAGAAAGTTGGTTTCTTCCCCCCCTTGAACCGTTCCTTTCCTTTCAACTTCTGAAGGTCAGCTGTATTCATT +>mm8 +---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTTTCTAAATGAAGCTGT-AACCTTCAGATCTGACTGGGGGT--GGGGGGCTATCACTGGATTCCAAGCCTAGGGTTAAAGGAACTTAGGCTAGAAACAACAGTTTTGGCAGGAGAAGAAAGTTGGCTTTTTTTCCCCCTTGAACTATTCCTTTCCTTTCAACTTCTGAAGGTCAGCTGTGTTCATT + +>hg18.chr10(+):123231360-123231859 +gacggagtctcgctctgtcgccaaggctggaatgcaatggcatgatctcggctcactgcaacctccgcctccccggttcaagtgactctcctgcctcagcctcccggagtagctgggattacaggtgcacaccaacacgcccggctaattttttgtatctttagtagagacagggtttcaccatgttggccaggctggtctggaactcctgacctcatgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagccactgcgcctgaccAACTTTTCCCAGTTTCTCAATGAAGCCATAAACTTTCAGATCTGATAGGAAAAAAACAGGGATATCAGTAGATTCCAAGTCTACAGTTAAAGGAACTTATACTAGAAACAACAATTTTGGCAGAAGAAGAAAGTTGGTTTCTTCCCCCCCTTGAACCGTTCCTTTCCTTTCAACTTCTGAAGGTCAGCTGTATTCATTTAAGTGCAATCTCTTCCTTTA +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTTTCTAAATGAAGCTGT-AACCTTCAGATCTGACTGGGGGT--GGGGGGCTATCACTGGATTCCAAGCCTAGGGTTAAAGGAACTTAGGCTAGAAACAACAGTTTTGGCAGGAGAAGAAAGTTGGCTTTTTTTCCCCCTTGAACTATTCCTTTCCTTTCAACTTCTGAAGGTCAGCTGTGTTCATTTAAATGCAAGCTCTCCCTTTA + +>hg18.chr10(+):123287470-123287969 +GTCTTCAATGTTTAATTAAAATGGCCTACTTATCTGTGCACTCTGACAAAAATGTATTTATAAGCTCATATACATGGTTCCCTTTGCACAGAGGAAATAGATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCAGCCAGCCACAGGCTCAGTCCTCAGACCTTTTCCTTTACTCTTCAGCTGGCCTTCTACAGTTGCCCTGTTGGGGAAATGATGCTTCTCTTTTAAAACCAAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGATCATGCAAAGCTCATAAACCCTGGCTGCCTGGAAAACAGAATATTGTCAGATGACAGAAGCAGCCTTGTAAAATGATAGTAGA +>mm8 +ACCTTAAATGGGAAATGAAAATGATCCGCTTATGGGTGCACTGTGACAAAAACCTATTTGTGAGCTCAAACATGTGGTTCCTTTGGCTCAGA-GAAATGTCTTCCAGGAATAAGCATTGAGCTAATTTCTGACATTGACTTTTTTC----------------------------------TTCCAGCCAGACAGGGACTCAGTCATTAAAT-----CTGTTTCTTTACTCTTTGTATGATA-AGTTGCCCTTCTTTAACCTTGTTGCCTCTCTTTTAAAAACAA-----------------------------CCCTTGCACGTACCAAGAATTTCAACATAATCTTAACTTCCAAAA--TGAAATGTTTTATACCACATCTACCTGATAAAAATAATGCTTAGGGGCCAAGAAGACTCCCCCAAGCCCATAAAACCTGGCTACCCAGGAAACAGAACACAGTCATACGACAGACGAGACCTTCTCAGATGACATTGGA + +>hg18.chr1(+):92746841-92747340 +TCTTATAAAATGGAAAACTTTAATTGTTTAAAGAAAAGGCACAAGTAAACATTTCAGGTTATCATACAATGTTACAATAAAAAATTCCAATAGCAAAATGAAACACATTATAACTTTGCTTCTTGGTAGTATACTGAATGTATTATTCTATCATCTCCTCTTTGGAGTAAAAAGAAGGGATAGGCAGATCAATGGATGTGATGTAAAAACTTGGATCATAAATAGCATCCACTATACCTTTAACCAGAAATTAAACTTCAGTAGaattaaaattaatttttaaaaCTTAGTTTTGTTAATAATAGAGCAGCAGTAACTTTCAAGCTAAAACTCATTGTTTTGGTAAGTAAATAACTGATTTCATGAAATGTTCGCTGTCAATGTCTGGTATGTTAATATACATTAATCAAGCTGGTCATGAAACAGTTTTACCAAAATATAATTCATATACTTATTTTACTTTAAACCTGAATATTACAGTACATTATATAAAAGATAA +>mm8 +TCTTGTAAAATGAGAAACTTTAATTATTTAAAGCAAAGGCACAAGTAGACATTTTAGGTT---ATACAGTGTTACAATAAGAAAACCCCGCAGGACAATGAAATACGTTGTAACTTTGCATGTCC-----------AATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGG-----TATGTAGACCCACAGATGT------AAAAGTTGGATGTTAAATAGCATCTACCCTATTGCCAATAAGaaatttaatt--aatagaattaataagaaattttaaaaattGTT--TGCTAAT-CTAGAGCAGCAATAACTTTCAAGCTAAAACTCATTACTTTAGTAAGTAAGTTACGGATTCTAC-AAATGTTGGCCATCGATGTCT----TGGTATTGTGCAATATCCATGCTGGCCATGAA--AAGCTTACCAAAACATAATTGATATCCTTAACT---TTTAAAACTGAATATTACAGTGCATTATGCAA------A + +>hg18.chr1(+):92860438-92860937 +tacgcattaaaaaatattattttaagaaggggtccacaggttccagactgccaacagtgttgatagcagacacaaacacaaaaacggtaagaacctttgTACTTAagaaactcttgaagatatacacaaggaaacataagcaagaatgttcagagtagcactgtttgcaagagcaaaaaggagagtggatcaataaattgaggtatagtcactgacagacttttctaaaagtccttaaaatgacagaactggagttacatgtataaacatggacaaatttcTTAATCTAAATACATGGGTGTTTGATACAATAATCTTTAGATTACTACACACCACCACCATTACCCTATACtatttttatttatttatttttCATTTATCAATGTAAAAATTTCATGGATTACCACCAGTCCAAATACTGGCATTTAGGAACCAGTGCCTATTACCATCCTGCTTCCAGCAAAATCCATCCAAAATCACACTTATTAGTCAGCAATGG +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr3(+):151165384-151165883 +GTTGGAATAAATTTATTTCATCTGTCTGTAAACAAGGTGTTTAATAGTTATGGCATTTTTTTAAATGCATATTAAATCAGATGAGTTAGACTGTATCCCAGATGTAACAAAGTGCAGGGAAAGAAATGGACAAATCAGCAACAAGATTTGTTTTTAAATCTGTACATTATCCACAAGGCCCAAACAATAGAAGCAAATACTAGAATGTCCCTAAAGTAGTGCCATTCGAAAGAAACCCTTAATAGGTCAGTTAAAATCCATCTCACAATAGCAACAGTTCATTTTAACAATAGTATGGCACAGAATACATATGAAAAAAATTCATCACAAGACAGCCAAGTCCACAATAATGCAACTTCATATAAAAACTCAAGCTGCAAATAAAAATTGGTCCTATGAAGAACAAACTGGACACACTCCAGATGGTTATGTTGGGATACCTAATGTCCATAATGGCAGCCTTTTACAATTTTACTAAAGAGTAGAGCTGGTGTGCAAA +>mm8 +GTTGGAATAAATTTATTTCATCTGTCTGTAAACAAGGTGTTTAATAGTTATGGCATTTTTTTAAATGCATATTAAGTCAGATGAGTTAGACTGTATCCCAGATGTAACAAAGTGCAGGGAAAGAAATGGACAAATCAGCAACAAGATTTGTTTTTAAATCTGTACATTATCCACAATGCCCAAACAATAGAAGC-AATACTAGAATGTCCCTAAGGTAGTGCCATTCGAAAG--------------------GAAATCCATCTCACAATAGCAACAGTTCATTTTAACAATAGTATGGCACAGGATACATATGAAAAAAATACATCACAAGACAGCCAAGTCCACAATAATGCAACTTCATATAAAAACCTAAGCTGCAAATAAAAATTGGTCCTATGAAAAATAAACTGGACACACTCCAGATGGTTATGTTGGGATACCTAATATCCATAATGGCAGCC-TTTACA--TTTTCTCAAGAGCACAGCTGGTGTGC-AA + +>hg18.chr16(+):56546748-56547247 +CAGAGACCTCCAGCTCCCATCACCCCTGAAACAAAGGAGAAGACAGGGTGGGTGGCTGGGTGGACAGGCGgagggaatgagtgagtgagtgagtgagtggatgagtgaatgaatgGGGAAGGTAAGGGACACATATCCCCCAGCCTCTCAGAGTCTCCCCATGACATGGGACGtgagtggaatggtgtctcccaaaaagataattgcaagtcctaaccccattacttgtgaatgtgaccttatttggaaatagcttctttgcaggtgtgattaagttaaggatctcaaagtgagatcatcccggattgagggtgggccctaaatccagtgactgatgtcctttttaaagaacggagagggaggcttgacacacacagacacagaggtaaaggctgtgtagagacggaggcgggcactggaggacagccagaagccaaggtttgccaaggaccgcaagtggccaccaggagcaaggagagcagcatgggcatgtctcgct +>mm8 +CAGAGGCCTCCAGCTGCTGTCGCCCCTGAAACAAAGGAGGTGACAGAGTAGGAGGATGGATGGATAGACAGATGGAAtggatggatgagtggatgagtggatgagtggatggatgggAGAGGAAGTGAACATGTAT-CCCCAGACCCTC--AGTCACCCCAT-------GTAGCGGATTAAAAAGTGTC-CCTGAAAAGACATGCCTAGGTCCT-ATTCTATCCTATATAAATGTGACTTTATTTGAAAATACAGTCTTTGAGAATATTATTGTCCTCAGAATCTCAAAGCAAAAGACTTCTGAATTTAGGGCAGGCCTTCCCCC-AGTGACAGTCA----------------------------------AG---GACACAGGGAGTAA------------------------ATAGAAGGACAGCTGGAAGCCAAGGAGGCTCAAG------------------GGAATCAGGAGAGCGGCAAGGACATTCCACACC + +>hg18.chr16(+):56475004-56475503 +tttgagatgaggtctcgctatgttgcccagtctgctctccaactcttggcctccagtgatcctcctgcttcggcttcccaaagcactgggattataggcatgagccaccatgcccggcAGTGAAGTATTTTCTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTTTAAAAGTGGAAAATCATTTTGTTCTTAAAAAGAGGAACAGTCAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGGCGGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGGGAAGGTGGGGCGCTGGGGCGC +>mm8 +---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGACCCTACCAAGTCATCAACCCTTGATTTGTCTAGTAGAGTTCTCCTTGTGTTGGAGCCCTCTTCTAGTCTCTCCTCAAATCTTTGAGAAGTACAAGGCGGTTTTCTTCTTGAAAATAGCAACCTCAGGAAGGGAGCAGGGTGCTCAGGGAATGGCAGGAGCTCGAGGGCACTACCACCTGGTGAAATTTG---AGCGTTTCTACAAGCCTGTGAGAAGGCGCCCTTAGGCTGGGACGCT-----------------------------------------------------------------TGGCGAG---------GCGGGGGTTC + +>hg18.chr8(+):145589254-145589753 +CAAGCAAAAAATGTTTTTCCTTGTGTTTTGTACAAAAAGGGGGTGGGAGGTAGTTCCGTGTGCTGGTGGTGACGGCATCCACGGGGCTAGAAGTGGGCGGTGACGCGGTCCGTCTCCAGCAAGTCGTCCAGGATCTGCAGGGGATGGAAgggtgggtgggtgggtgggtgggGATGCACACGGAggggcggggcgcgcggggggcggggcgcgcACTCACTATGTCTGGTGTGGTGCCGATCTTCTTGGCTAGCTCGCTGCGCTCCATGGTGCTCAGGTACAGGTAGCGGTTGAGCAGCTCCCCATCCAGCACGTTGCGCACGGCATTCTGGAGGGTGCGGCGGTCCACGTGCAGCATCCTGGGGCGTACAGGCACAGGTGTCAGGGCAGGCTGGGGTGGAGGGGGTGCTGCACGCGGGCGGGGCCGGGGCTCACCGGAAGGCGCGGGGGTTGAGGCCGGCGTGGTGTGGCAGCATGGTGGTCAGCGCGTTCTGCAGCA +>mm8 +GAA---AGAAATCGTTTTCTTTGTGTTTTATACAAAATGGTAGAGGGAAGT------GTACAACACCAGA-GCAGCATCC-TAGAGTTAGAAGTGAGCCGTGACCCGGTCTGTCTCCAGCAAGTCATCCAGGATCTGTGGGTGATGGA----GAGGTAAAGGTGTAGACAGGAA---GGGTGGTGAGGGCGA--GGCCGAGGGCGAGGGCGT-TACTCACAATGTCAGGCGTGGTACCTATCTTCTTGGCCAGCTCACTGCGCTCCATGGTGCTGAGGTATAGGTAGCGGTTTAGCAGTTCCCCATCAAGGACGTTGCGCACAGCATTCTGCAAGATGCGCCGGTCTACGTGCAACATTCTGGGGTG-GTAGACATAAAGGTCAGGGCAATGTGGAGTACAGGGTGAGAC---CGGGGAAGGGGC--GCACTCACCGGAAGGCGCGGGGGTTGAGGCCAGCGTGGTGGGGTAGCATGGTCGTCAGTGCATTCTGCAGCA + +>hg18.chr1(+):159899157-159899656 +TGGTAGGTGGCCTGGAGTCCCCATGCTCAATTTCAAGAAGCATCCAGATTCCAGGGCCTGGGTCTCCAAATGGAAGTAGAAGTACTAGAAGATTGCTGGTGCACGCTGTCCTGCATCACCCTTTCTCAGGAGGATAGAGACTGAAACAGGAGGTTCTGAGCTGAGTTTTGGTGACCATTTCCCTCTTTCTCCCAGAGGCCCAGGCCAGCTGTGGCCTCAGAGGAAGAAGAAGGGAGTTGTTTCCCTAGTTTCTAAAATTTCTGTGAATTTGAACATGGGCTACACCAGATTTATTCTGGGAAGCTCTGAATCTTCTAGGAGGGAAAGACTGAGAGGAAAGAGGGTGGAAAGGGAGGAGCCTGTGATAAAACAGAACATTTCTTTTTCACTTCCCCTTTCAGACTCCAGAATTTGTTTGCCCTCTAGGGTAGAATCCGCCAAGCTTTGAGAGAAGGCTGTGACTGCTGTGCTCTGGGCGCCAGCTCGCTCCAGGGAGTGA +>mm8 +TGGTAAGTGGTTGTGGGTACCTTTATTCAGTTTCTGGAGGAGTCCAGATCCCACAGACTGGACCTTC---------------------AAGACTCTTG-------CCATCCTCCAT------------------CACAGACTGAGGCAAATGACTCTGAGCTGCGTTGGGGTGAAGTTTTCCCTCTCTGTACCAGACGTCCAGGTCAGCTACGGCTCCAGCAGAACATGAAGGGAGTTGTTTCTC-AGTGTCTAAA--------AAATTGTGATTTGAGCTGAATCCAGTTTATTCTGGTAAGTCCTGAGTCTTCTAATAGAGAACGGATGAAAGGAAAGAGGGTGGAAGGGGAGGAGCCCAGGATTAAACAGACCGTTTC-TTTTCACTTCCCCATTTGGACTTCACAATTTGTCTGTTCTC-TGGGTACTATCTGCCAAGCCGGGAGGGAAGCCTGTGCCTGCAG-----------CTGACTCGCTCCAG-AGCTGA + +>hg18.chr1(+):159899076-159899575 +GCCATCCTGACATACCTCCTTGTCCTTGTTCCACAACTCAGCAGTGAGTCTGGGATTATGACAATAGAGAAAATTAAATGATGGTAGGTGGCCTGGAGTCCCCATGCTCAATTTCAAGAAGCATCCAGATTCCAGGGCCTGGGTCTCCAAATGGAAGTAGAAGTACTAGAAGATTGCTGGTGCACGCTGTCCTGCATCACCCTTTCTCAGGAGGATAGAGACTGAAACAGGAGGTTCTGAGCTGAGTTTTGGTGACCATTTCCCTCTTTCTCCCAGAGGCCCAGGCCAGCTGTGGCCTCAGAGGAAGAAGAAGGGAGTTGTTTCCCTAGTTTCTAAAATTTCTGTGAATTTGAACATGGGCTACACCAGATTTATTCTGGGAAGCTCTGAATCTTCTAGGAGGGAAAGACTGAGAGGAAAGAGGGTGGAAAGGGAGGAGCCTGTGATAAAACAGAACATTTCTTTTTCACTTCCCCTTTCAGACTCCAGAATTTGTTTG +>mm8 +GCTGTTCTCACATATGGCCTAGCTTTTGGTCTACAATCCAACAGTGAGCTGGGGATTGTGATAACAGAGAAACCCAGATGGTGGTAAGTGGTTGTGGGTACCTTTATTCAGTTTCTGGAGGAGTCCAGATCCCACAGACTGGACCTTC---------------------AAGACTCTTG-------CCATCCTCCAT------------------CACAGACTGAGGCAAATGACTCTGAGCTGCGTTGGGGTGAAGTTTTCCCTCTCTGTACCAGACGTCCAGGTCAGCTACGGCTCCAGCAGAACATGAAGGGAGTTGTTTCTC-AGTGTCTAAA--------AAATTGTGATTTGAGCTGAATCCAGTTTATTCTGGTAAGTCCTGAGTCTTCTAATAGAGAACGGATGAAAGGAAAGAGGGTGGAAGGGGAGGAGCCCAGGATTAAACAGACCGTTTC-TTTTCACTTCCCCATTTGGACTTCACAATTTGTCTG + +>hg18.chr4(+):5763326-5763825 +CGTCTCAGTGGGGTCTGGGTGTAAGGATCCCTTTACCCATCCTCCTAGTGGAGACTGAGTGTAACGGTGTCTCCACCCATTGTCTCGACCTTCCCTGGGACAAAATAAGATTAAAACAGGAGTCTTCGCGTGAGCAAGTTCAGAGGCGTGGAGGGCGGTGTGTTCCCGGGAAGGTTGATGGGTAGAGGTTAGGGGCAAGGGCAGGGGGTTGGAATTGCATtgatcccagcgtcttcatcaggaggatgggcggagcacccaccgcagagggttattgagaaagttaatgagatcattaagctaaatgcgtagcatattctaagcctcaaaaaaCTTAAAGGAGCCTTCTAAGCCTCAGTAAAGTTAAAGGGGTGGAAACCGGGCCCCCCTCCGGAAGGGTCCGGGGCTGGGAGGCGCGTCTGTCTCTGGGCATGCTCAGTGCAGGGGCAGGGCTGGGGCGGGGGTGGCTGAAAGTTTTGAGCGGTGATCCAGGCTCCTC +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCCTCGGGCTGAAAGGCGCGCCCCG-GCTGCGCATGCTCAGTGCA-CTGTAGGGATGGCCCGGAAA-GGCTGAAAGTTTGGGGCGGCGGTCCAAGCTCCTC + +>hg18.chr2(+):70753968-70754467 +GAAGAGAACCAGCCAGGAGCTTTGTGTCGTGAGCACAGAGCACATCAACGGGTAAGAGGTGGACCCACAACCACCAACTCCCCTTATTTTATTTTTTGCTGACTCCCCTTAAAAACACCCATGATTTCTTTGCATGTAACTATTGTTTAATTCATCAAATTTACATTTTCTGTCCAAACAATCCCTAGGGATAAAAAGTGCCATGTTCCTCTATTTGCTTTTCAATTGGCACATTAGAGCTCCAAGCAAGCCAGCAAGGGttttttggtttttgctgttgttgtttgagatgaagtctccctctgtcacccaggctggagtgcagtggtgtgacctcagctcactgtaacctccgccttctgggttcaagcaattctcctgccacagcctcctgagtatctgagatttttggcgtgtaccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaactgctgac +>mm8 +---------TGGACAAGAC-CTGGTGCTGCAA--------CACAAGCACAGAT-GGAGGCAGAGTCCCCACC-------------------------GCTGGCTCTCCAGAGGGTCACCTGGGGCTTGTTCTCAGGGGATTACCAGTTAACTCAGCTAGCTTACAACTTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr2(+):70744123-70744622 +TCTTTTTCTTCTTTGAGGGAGACTTGGAAGGTGAGCCCTCTGGGGACATGGGGCCGCTGGTGACCGACTCGGTTTTGTCCTTAGAGGTATCAACATCCGTGTCAGCACTGGTGGTCATCTGGCTCAGGCCTTTGCTGAGGATTTCCTCTGCCGTCTGCTCCTCCTCCCTCCCGTTGACCACCACCCCTTCCGGCTGGGTTGTTTCGGGCTCTGTGGTGGCGGCTTTGCTTGTTTCTGTCTTCTTAGTACCTTCTAGAAAAAGATCAAAAGATATGACCTGTAAGATTTCATTCAGGTGACAGCTTCCACCTGGGGCTAACAGAACCATTTCTAGGGAATTCTATAAAATCAATCCAGAGCGAGGGGAGGGCCAGCCTGATGTTGAGGGATGGCTACCAGAGACAGATGGAAGGACTGGGTTCTGATCTGCACCTTCCATGTGGCCTGTCCTGGGAACACCCCCTTGCAGGCTGGCAGCTCTGGGCTCTTGTCTATGAAT +>mm8 +TCTTTTTCTTTTTGGAGGGTGACTTAGAGGGCGAGCCCTCTGGGGACAAGGGGCCACTGGTAACTGACTCGGTTTTGTCCTTGTAGCTGTCGCCATCAGTGTCAGCGTTGGTGGTCATCTGGCCCAGTCCTTTGCTGAGGGCCTCTTCTACGCTCGGCTCCTCCTCCTTCCCATTCACCACCAGCCCTTCTGGTTTCACTGGCTCAGGCTCTGTGTT---GGCTTCGCTGACTTCTGTCTTCTTGGTA---TCTAGGAAAAGACCAGAAGACCCAACCTGTAAGATTTCATGAAGGCG--AGTGT----------TCAACAGAACCACTTCTAGGGAGGTCTGGAG-------CCAGG--GAAGTGCAGGCTGGCATGGGGTGGGAGAAGGATCCTGGAACAGAGGAGGGGTGGCGT---------TCTCACCTCTCACTA--CCTGCCTGGGGAACACCCATTGCGCAGGTGGTAACTCTGGGTCCTTGTCTACATTT + +>hg18.chr2(+):70744138-70744637 +AGGGAGACTTGGAAGGTGAGCCCTCTGGGGACATGGGGCCGCTGGTGACCGACTCGGTTTTGTCCTTAGAGGTATCAACATCCGTGTCAGCACTGGTGGTCATCTGGCTCAGGCCTTTGCTGAGGATTTCCTCTGCCGTCTGCTCCTCCTCCCTCCCGTTGACCACCACCCCTTCCGGCTGGGTTGTTTCGGGCTCTGTGGTGGCGGCTTTGCTTGTTTCTGTCTTCTTAGTACCTTCTAGAAAAAGATCAAAAGATATGACCTGTAAGATTTCATTCAGGTGACAGCTTCCACCTGGGGCTAACAGAACCATTTCTAGGGAATTCTATAAAATCAATCCAGAGCGAGGGGAGGGCCAGCCTGATGTTGAGGGATGGCTACCAGAGACAGATGGAAGGACTGGGTTCTGATCTGCACCTTCCATGTGGCCTGTCCTGGGAACACCCCCTTGCAGGCTGGCAGCTCTGGGCTCTTGTCTATGAATTTAGATGGATATTAA +>mm8 +AGGGTGACTTAGAGGGCGAGCCCTCTGGGGACAAGGGGCCACTGGTAACTGACTCGGTTTTGTCCTTGTAGCTGTCGCCATCAGTGTCAGCGTTGGTGGTCATCTGGCCCAGTCCTTTGCTGAGGGCCTCTTCTACGCTCGGCTCCTCCTCCTTCCCATTCACCACCAGCCCTTCTGGTTTCACTGGCTCAGGCTCTGTGTT---GGCTTCGCTGACTTCTGTCTTCTTGGTA---TCTAGGAAAAGACCAGAAGACCCAACCTGTAAGATTTCATGAAGGCG--AGTGT----------TCAACAGAACCACTTCTAGGGAGGTCTGGAG-------CCAGG--GAAGTGCAGGCTGGCATGGGGTGGGAGAAGGATCCTGGAACAGAGGAGGGGTGGCGT---------TCTCACCTCTCACTA--CCTGCCTGGGGAACACCCATTGCGCAGGTGGTAACTCTGGGTCCTTGTCTACATTTTGAAATATATGTTGG + +>hg18.chr2(+):70742773-70743272 +AAGAGAATGGATTGTCTAATTTTTAGGAGCCAACAAATGCTCATTAATCAATGCCCCACGGAAGAACATGAGAAGACAGTGTTGGCATTTAAAACAATAACTGTGGCCATTACCAGGCCCCAGGATGGACAGATAGGGACAAGGACAGGGATACCCAGCATTTCTCTGAGAGCTGGTGCAAGAGGATTAATCCTGAAGGGCTCATTTCTGATTCTCCTCTGCTGGACAAAGAATGACTGAGTTGGAACCTCAGAGGGTGCAAGTCAAGGTGCCAAGAGTAAGATGCCAGTTTCGGTCTGTAAGCAAGTGTTTCTGGGGGTGAGGGAAGGTCAGGGGAAACCTGACCACTGGACAGGAGTGAGGCAGGTACAGTGCATTGCTCCAGGTGTCATGCAAAGCTAGAAAGTCAGCATTTCCTCTGTTGTTTTGATCCTCCTTATACAACCCAAAGCCAACAGAGGATTTCAACTTCCCCAAATTTCTGCCCTGAGCATTAAAC +>mm8 +AGGAAGATGGATTGTC-------TTGGAGCCAGA-AGTGTTCACTAACCAATCCTCCTTAGGAGGATATGGGAAACCAGTGTTGGCGTTTAAAATAACAGCTCTGCCTATTGCCAAGCTTCAGGATGCA-AGAGAGTGATGGGCTTGGGAATGCCAGCCGTGTCTTTAAGAGTTGGTGAGAGAGAATTAACCCCAAAGGACTCATTTCTGACCATCCTCTCCTGTACCC--TCTGACTGAGTTGGGACC-CAAAAAGCCAAGGTCAAGATGCCAAGAGCAAGAT----TTTCTGGTCTGTGGGCAAGAGCCCTTGGGGATGTGGGAAGGCCAAGGGACACCTGGCTGCCAGGCAAGAGTGAGGCAGATACA-------GCCCTGCATAGCATGCAAAGCCAAAGGGGTA----------------TCTGA-CCTCCTCACACAACTCAATGCCAGCAACAGATTTGGATGTCCCAGAATTTCTTCCCTGAGCATGAGAC + +>hg18.chr2(+):70744065-70744564 +CAGGACTCCACTTTCTCCTTCTTTTTGCTCTTTTTCAGGAAGGAGGGGGTTCGGAATTTCTTTTTCTTCTTTGAGGGAGACTTGGAAGGTGAGCCCTCTGGGGACATGGGGCCGCTGGTGACCGACTCGGTTTTGTCCTTAGAGGTATCAACATCCGTGTCAGCACTGGTGGTCATCTGGCTCAGGCCTTTGCTGAGGATTTCCTCTGCCGTCTGCTCCTCCTCCCTCCCGTTGACCACCACCCCTTCCGGCTGGGTTGTTTCGGGCTCTGTGGTGGCGGCTTTGCTTGTTTCTGTCTTCTTAGTACCTTCTAGAAAAAGATCAAAAGATATGACCTGTAAGATTTCATTCAGGTGACAGCTTCCACCTGGGGCTAACAGAACCATTTCTAGGGAATTCTATAAAATCAATCCAGAGCGAGGGGAGGGCCAGCCTGATGTTGAGGGATGGCTACCAGAGACAGATGGAAGGACTGGGTTCTGATCTGCACCTTCCATGT +>mm8 +CAGGATTCCACCTTCTCCTTCTTCTTGCTTTTCTTCAGGAACGAGGGGGTTCGGAATTTCTTTTTCTTTTTGGAGGGTGACTTAGAGGGCGAGCCCTCTGGGGACAAGGGGCCACTGGTAACTGACTCGGTTTTGTCCTTGTAGCTGTCGCCATCAGTGTCAGCGTTGGTGGTCATCTGGCCCAGTCCTTTGCTGAGGGCCTCTTCTACGCTCGGCTCCTCCTCCTTCCCATTCACCACCAGCCCTTCTGGTTTCACTGGCTCAGGCTCTGTGTT---GGCTTCGCTGACTTCTGTCTTCTTGGTA---TCTAGGAAAAGACCAGAAGACCCAACCTGTAAGATTTCATGAAGGCG--AGTGT----------TCAACAGAACCACTTCTAGGGAGGTCTGGAG-------CCAGG--GAAGTGCAGGCTGGCATGGGGTGGGAGAAGGATCCTGGAACAGAGGAGGGGTGGCGT---------TCTCACCTCTCACTA + +>hg18.chr3(+):172801314-172801813 +ATTTCATTAGCTCTCTCCTTCACCTTGtttattaattctacaagcatttattgccatctcctatgtgccaagcactggtccaggctctggggatacactatgaacaaaatacagtgaagtccctgccccatggagcttacattctagtagggggagacagacaaacacataaatacaaaatatcagagggtTCAAAACAGCTTAGAGGTATCTTGCCTGAATTCTGTTTACTGCATATCCTCATTCTTGGGCAATGATAAAGTGAAGAGAGAGGCCAACAATGGGCTGCAGCAATGTTGctagtcccagctctaccatctacacattgagtggatttaagtgagttctcatctgatctgagcctcagtttcctcatctataaaatggggagaaattggattaaattacttataagggaaagggtcctttcaggctttTTTCATGAGAGTAGGGTGCTGAAAATCAAGAGCCAGTTTGTTGACTCCTCTAAGGtttaaaa +>mm8 +AGCTCATCAGCTCCCTCTCCTGTATAATATTttcactccacaaacatttacccacatgtcctttgtactaggcactgtttcagagtctgaagacaaac-----taaacaacctatgaagtctctgccgtgtccaggtaccattctagtagtgg-----agacaaagaaacaCAG-------ATTACAGGATTCGAAAGAGC--AGAAGACGCCCT------GTCTGAAACCTCCATGTCCTTCGTCTGGGGTAATAATGAAGTGAGGAGAGA---CTAACACTGGGTGCAGGAGT-CTGTT---------------GTACATCTGATGGGCAGGTCTACATCATTACTCCTCCAATGTAACCCTCT---------GCTGTACCATGGGGAGGG-TTAAAGTAAATGATTTATTATAGGTC----TGTGCCAGACCTTTCTAATGAGAACATTTTGTACAAAATCAAGAACCATTTTTTTTACTGCTTTAAGGtt----- + +>hg18.chr3(+):172812085-172812584 +CAGGGATCTTCGACACCTGGAGTCATTTTAGACCTGAAAACAGAAGTTTCCACATTTAAATTTTACACCAGCAGTCACTGGCATACCCCTTCAATAATTTTTATTATATCCTTGTATTACTGGAATTAATTTGATTTTAAAAACTTAAATGGAAGCTGGAGGGTTTGACCTGGTCTAGTCCTAATTCAGTTAAGGACTAGTATTTAATtggctcacgtctgtaatcccagtgctttgagaggccaaggcaggaggatcacttaaagccaggagtttgagaccagcctgggcagcacagcgagacacggtatctacaaaaaatttttaaaaattagctgggtgtggtgacacgggcctgtagtcccagctactcggaatgctgagccaggaggattgcttgagcctaggaattcaaggatgcaatgagctgtaactgcaccactgcaGTTTTTTCTACTGCACGTGACAGTAATAAAAAGCTATTAAAATAAAAAATAtt +>mm8 +CAGAGA--------------AGTCCTTTTAAACCATGGAAGTGTGATACTCACACTTAAATCTGAGACCAGCAACTACGGGA--GTTCTTTGGGTCATATCCCTGTAAT-------AAAGTGAAATTAC-----TTTTAAAATCTTACACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAT---AGACTATTAAAATACtatgtatg + +>hg18.chr4(+):74565827-74566326 +ttttttatatgttgactgacaggttgttttcatattttggctattgtgaataatgaggtaataaacaccgaagtgcaggtatatcttcTTAATTTTTTAtttttaatttttgtgagtacatagtaggcgtacatatttatatatctttgagatactgatttcacttcctttggatatatatgcataagagagattgcttgattatatCTGTTCTGGCCCTTTGTTCCTTTAACATTTGCAGTATTTTAAGTTTTTTTTTGGTTGTCTATTTGATTAAGTATTGTGCATACTTAGCCTGTGGACTTTTGTTCCAACTCAGTAGATTTTTTCCAGCGAAACACAAAGGTAATTTTTTTTTCTGGTTAATATTTAGCAAGAATTCTGCAGAGTGATCAAAAAAATCAAATACTCAGTATTTCAGAAATAGATTAAATAGGTTACTTTTTTACTGATAATGTGAAAGAATGATATAAAAACTTGATTTTCCTCAACAACATTA +>mm8 +--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTCTTTTC-TTCTTTAACATTTGGAGTATGTTA--------------CAACTTTTGGAAGGAGGATTATTCTTAC----CCTGTGGGCTTTTATTCCAATTCAGCAGATTTTTTTCAGTGAAACACAGCATAAT--TTTTCCCCTAGTTAATAATTACCTAGAATT-TGCACCAGGACCAAAAAA---AAAGCCTATGTATTTCAGAAATAGATTAACTAAGTTACTTTTTAACAAGTTAGGTCAAAGAATACTATAAAAAGTTGTTTTTCCCCAGTCACATTG + +>hg18.chr19(+):10684644-10685143 +CTGCACGCACTGCTGCACAGTGACAACACGGCCGCGCTGCACCACCTCACGGTCCACAACATCGCCTACCAGGTGAGCCAGTGCCCGGGGCAAGGTGGGCGGGGGTGTCCTAGGTGCGTATGCCCCACGCTGACCTCCCCTCCCCGCAGCTGCAGCTCATGAGCGCCGTCCGCACCAGCATCGTGGAGAAGCGCTTCCCGGACTTCGTGCGGGACTTCATGGGCGCCATGTACGGGGATCCCACCCTCTGTCCCACCTGGGCCACTGACGCTCTGGCCTCTGTGGGAATCACACTGGGCTGACCTGGCATTGGGAgagggagggaggaaggaagggagggagggGCTGGAAGATACTGAAGGATTCCTTTTTGAAAGGTTTTTTTTATTGTAACTTACAGAGTGTGTCTGTGTCTTCTTGAGGAAGTGGCCTGTCTGGGTCCCCCTCCCAGTCTGAGCGTCATTGCAGTGGAATATCTCCCCTTCTCACCAATCATAAC +>mm8 +CTGCATGCCCTGCTACACAGTGACAACACTACAGCACTACACCACCTAACCGTGCACAACATTGCCTATCAGGTGACCTGGAGGGCAGGGCGGGTGGGGCGGGGACACTCTTGGTGCTGGTGGCTCACACTGATGCTTCTGCCCTGCAGCTGCAGCTCCTGAGTGCCGTGCGCAGCAGTATCTTGGAACAGCGCTTTCCTGACTTTGTACGAAACTTCATGCGCACTATGTATGGTGACCACAGCCTCTGTCCTGCCTGGGCCGTTGAAGCACTGGCCTCTGTGGGAATCATGCTCACATGACCTGGTTGCT-GGGAAGGACACTGGGGTATGGGGA---------------ATTCTGAAGGATTCTTTTTTAAAAAGATTTTGTTACTATTGTTTTCATCTTGTGTCTGTC--TTCTT-------------------------------------------------------------------------------- + +>hg18.chr19(+):10689340-10689839 +GCAACGAAGTGATATTTATATGAACCAATGGGAAATTCTTAGGGAACGAGGTAGTAGCTCAATCCCCAACACCATTGGTCCACATTGTCTACTGGCACGTCTGCCTGCCAATAAGATGGTGGAACTTCGCCAATGGGCAGAGCCAACGTGCCTTTTTCGGAAACACCCCCTTCCTCTCTTGACAACTTGCTTTCTGCCGCTATTGGCTGTTGCACAACAGTGACGGTTCTTTTGTCCAATAAGTCAGCAAGACGGTCCCCAGGGGGAAGGTTTACTCAACCATAGGCCCGTGCCTAGTTTTTATTGGCTAGTGTATCCGAGTGGCGGTGCAGCAGGCCAGTCGCGTGCGGCGCGAGTGCTTTGGGCGCAGCCCCCGGGGCCGGGGCGGGAGGTCGCTCGGGTCGGGTGTCGCCTGAGAACCGGATGAGGCGGCGACCGTGAGGCCGAGCCGGGAGCGGGCGTCTTGCCGAGGCCCGGGCGGGCGGGGAGCAACGGCTAC +>mm8 +GTAGAGAAGTGATATTTATATCAGCCAATGAGAAATTTTTACGGAATTAACTAGTGTCTGGATCCCTTACACCCTTGG--CAGGTT-------GACGTTTC-TGCGACCAATAAGCCAACCCGAATCACCTAGTGAGCGAGGCCTCAGTGTCTTTTCCAGAGACCCCGCCTTCCCGGTCTGACAACCCG-GTTTGACTTCTATTGGCTTTCACTTAAGAGTGACAGTTTTATTACCCAGTGAATTTGTGAGAT--------------TAGCCCTTC----------CTCGTGCCTT--TTTTATTGGCTCACGTTCTTGAGTGGCAGTGCTTTGAACCAATTGGATATAGCAGTAGGGTTGCGGACTCCGCCCCGGAGGCCGGGAGGGTTGTTCGCTCGGGTCGGGTGTCGCCTGAGAACCGGATGAGGCGGCGACTCTGAGGCCGAGCCGGGAGCGGGCGTCGCGGCGGAGACCGGGCGGGCAGGAAGCAACGGCCAC + +>hg18.chr19(+):10689256-10689755 +GTTTTTCTGATTGACAGATATGGTTCTCAATGATAGTCAAGATTCGGATGTTAAAGCCCGCCCTCTTTTGCCTGGTTGGCTGGAGCAACGAAGTGATATTTATATGAACCAATGGGAAATTCTTAGGGAACGAGGTAGTAGCTCAATCCCCAACACCATTGGTCCACATTGTCTACTGGCACGTCTGCCTGCCAATAAGATGGTGGAACTTCGCCAATGGGCAGAGCCAACGTGCCTTTTTCGGAAACACCCCCTTCCTCTCTTGACAACTTGCTTTCTGCCGCTATTGGCTGTTGCACAACAGTGACGGTTCTTTTGTCCAATAAGTCAGCAAGACGGTCCCCAGGGGGAAGGTTTACTCAACCATAGGCCCGTGCCTAGTTTTTATTGGCTAGTGTATCCGAGTGGCGGTGCAGCAGGCCAGTCGCGTGCGGCGCGAGTGCTTTGGGCGCAGCCCCCGGGGCCGGGGCGGGAGGTCGCTCGGGTCGGGTGTCGCCTG +>mm8 +-----------------------------------------------------------GCTCTCTTTCCTCTTACTGGTTGGAGTAGAGAAGTGATATTTATATCAGCCAATGAGAAATTTTTACGGAATTAACTAGTGTCTGGATCCCTTACACCCTTGG--CAGGTT-------GACGTTTC-TGCGACCAATAAGCCAACCCGAATCACCTAGTGAGCGAGGCCTCAGTGTCTTTTCCAGAGACCCCGCCTTCCCGGTCTGACAACCCG-GTTTGACTTCTATTGGCTTTCACTTAAGAGTGACAGTTTTATTACCCAGTGAATTTGTGAGAT--------------TAGCCCTTC----------CTCGTGCCTT--TTTTATTGGCTCACGTTCTTGAGTGGCAGTGCTTTGAACCAATTGGATATAGCAGTAGGGTTGCGGACTCCGCCCCGGAGGCCGGGAGGGTTGTTCGCTCGGGTCGGGTGTCGCCTG + +>hg18.chr13(+):93889844-93890343 +AATGCTTTCAGAAAAGGAGGAGGCTTAATCAATATTGGGGGGGGGGTTATTATTAGATATCACAAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAAGGCATGAGCA--CTAGGCTTCTTCTGTGTATCTCTTGCTGCTTAAATGTGTCTCCATTAGGGGTGTATATCCTTTTCGAAGTCTTCTATATTGAAGAAAAGCCAACAGCACAAAAAGACCAACCAAAGCCACCAGTGTTCCCATGACTACTAAGAGAGTTGTGGGCCAACCTGGAGTTTCTTCAACTGAAACTAAAGCAGAAG +>mm8 +--TGCTTATAGAATAGAAAGAGGCTTATTCAATAT-----AAGGACTTTTAATCAAAGGTCACATATAACTAGCCACACCTTACTTTGACCGTGGTGAATGACCCAAGCATTTTGTCTGTGT-------ACAA-TAAGCAAAGCAGCAACTAGAGATAATTGTCTGCTAAGGCATATCATCATCACTACTAAAGAGCACACGCTGAAGAGTTCCACCTCAAGAAGCGACGGTG-TAATTAGTTACT-----------------ACCCAGGTCAGGCC------------------AGGTAGGAGCA--CTAGGCTTCCTCCGTGTATCTCTTGCTGCTGAGACCTGTCTCCATTAAGGGCGCATAGCCTTTGCGAAGCCTTCTGTATTGAAGAAAAGCCAGCAACCCCAAGAGCAAGACGAAAGCTCCCAGGATTCCAATGACCACTGAGAGAGTTGTGGACCAAACTGGAGCTTCTTCCTCTGCAATGAGAGCAGACA + +>hg18.chr2(+):151974175-151974674 +tttgtatttttgttttttttaagtagagacggggtttcaccatgtgttggccaggctggtctcgaactcctgacctcagactcggcctcccaaagtgcttggattacaaggtgtgagtcaccgcgcccggccAGCTCTTAGTCTTAAACCCAACAGTACGTTATCTCCTTTTGCTAACTGATTTGTTGCTAAAACTTCAACAAGCACTGGACTTGGAGTTTGAACACTTAGTCTGAGGGCCCACTATGTTCAGTCTAGTGAGTCTGAGCAATTAACTCACATTTTGAATTTCAAGTCTCTCGCCTTAGGCAAAACACCACCACCTGATGCTCACCAGAGGGGCGTGACGCGGCAGCTgggcagggaagggatgggaagggatgggaagggaGGCGATCGATAACTCCGGTGTGCCGCTGACTGTTGGATTGGCTCGAACTTCTCCCGCCAGGCCTAACCTACTCCCGCGCACTCCTGGGCCCGCCCAGCCGCCATCTTG +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------CAAGCCCAACAGCCTGCCATTCACTCTCAATAAATGGTTTTGTG-GGCTCCTTTGGGAAGCACTGGAGT-----TTTGCAAACTTGGTCGGCTGAGCAAGTAGCTGGAGTCAGGTGGAGTGGGGC-ACTAATTTACATCACCCATCTCTAGCCCCGGGCTGGAGGCGATACACACCCCCC--GAGGTGCTCcgggggcgggg--gcgggggcgggggcgggCAGCA---------------------GGCCATCGAGCAGCCCGGCGCGCCACCGCCCGTTGGATTGGCTCGAGCCTCTCCCGCCAGGCCTgcccggctcccgcgcgccgctgggcccgccccgccgccATCTTG + +>hg18.chr2(+):151974202-151974701 +gacggggtttcaccatgtgttggccaggctggtctcgaactcctgacctcagactcggcctcccaaagtgcttggattacaaggtgtgagtcaccgcgcccggccAGCTCTTAGTCTTAAACCCAACAGTACGTTATCTCCTTTTGCTAACTGATTTGTTGCTAAAACTTCAACAAGCACTGGACTTGGAGTTTGAACACTTAGTCTGAGGGCCCACTATGTTCAGTCTAGTGAGTCTGAGCAATTAACTCACATTTTGAATTTCAAGTCTCTCGCCTTAGGCAAAACACCACCACCTGATGCTCACCAGAGGGGCGTGACGCGGCAGCTgggcagggaagggatgggaagggatgggaagggaGGCGATCGATAACTCCGGTGTGCCGCTGACTGTTGGATTGGCTCGAACTTCTCCCGCCAGGCCTAACCTACTCCCGCGCACTCCTGGGCCCGCCCAGCCGCCATCTTGGTCTAGGAGGGAGCGCGCCGCACGCGT +>mm8 +---------------------------------------------------------------------------------------------------------------------CAAGCCCAACAGCCTGCCATTCACTCTCAATAAATGGTTTTGTG-GGCTCCTTTGGGAAGCACTGGAGT-----TTTGCAAACTTGGTCGGCTGAGCAAGTAGCTGGAGTCAGGTGGAGTGGGGC-ACTAATTTACATCACCCATCTCTAGCCCCGGGCTGGAGGCGATACACACCCCCC--GAGGTGCTCcgggggcgggg--gcgggggcgggggcgggCAGCA---------------------GGCCATCGAGCAGCCCGGCGCGCCACCGCCCGTTGGATTGGCTCGAGCCTCTCCCGCCAGGCCTgcccggctcccgcgcgccgctgggcccgccccgccgccATCTTGGTCGTGGAG-GAGCGGGCTGCACGCGT + +>hg18.chr5(+):113796627-113797126 +agtcccatcgaccacccaagggctgagtagtgcgggcgcacagcacgggactggcaggcagctccacctgcagcccctgtgcaggatccactgggtgaagccagctgggctcctgagtctggtggggccttggagaacctttatgtctagcccagggattgtaaatacaccaattggcattctgtatctagctcaaggtttgtaaatacaccaatcagcaccctgtgtctagctcagggtttgtgaatgcaccaatcgacactgtatctagctactctggtggggccttggagaacctttgtgtggacactctgtatctgtctaatctggtggggacgtggagaacctttgtgtctagctcagggattgtaaacacaccaatcagtgccctgtcaaaacagaccactcggctctaccaatcagcaggatgtgggtggggccagataagagaataaaagcaggctactggagccagcagtggcaacccgctcgggtcctc +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr5(+):113725416-113725915 +AGGCGGAATCCCTGCCCTGGAGCGCCCTGGCTCTGGACTGCACCCCCCTAGGGTTTGTCCTGCAGATTCCCCTCCCCATCTTTCTCTGCCACACACGCTTCCCTAAGCCGCGCGCGCCGCAAACTCAGTCTCGGTCCCCGCAGGTGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCGCCGCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCCCGCCCTTCGCGCCCCTCCCGCACCCTCACCACCACCCGCACCTCGCGCACCAGCAGCCGGCCAGC +>mm8 +AGATGGAATTCCTGCCTTGGAGTGCCCTGACCCCGGCCTAAGCCCCCAGGGGTTTCATTCTGCAGGTTCCCCTCCCAACCTCTCTC--ACACACATGCTCCCCTAAGCCGCGCGCGCCGCAAACTCAGTCTTGGTCCCTGCAGGTGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCCTGGTCTCCCTGCAGCTTTAACAGCTCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCACCGCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCGCGCCCTTCGCGCCCCTCCCGCACCCTCACCACCACCCGCACCTCGCGCACCAGCAGCCGGGCAGC + +>hg18.chr5(+):113725066-113725565 +AAACTTTTTCTCCCCAAAGCCAGTGCCCCCGCAGTTACTTGGCGGGCAGCCGGCAGCCCACTCTCGGCGGGATGATCTGGGAGAAGCGGGCGTGGGACGAGGGGGCTGCTGTTTTGCAGCCCTGCGAGGCGTGCAGTCGGAGAAGTGGTCGGGGTTCCACACCGTCCCTGAGCCTGCCCCCGGCCAAGGTGGCCCGACGTGCTGCAGTGGCTGGCGCAGGTGATCCGGGCAGCGCGTCCGGCACTAGTCAAGGGGGCAGCGGCACGGGAGGGAGGGGCGCCTTTCTCTTTTCTCCTCCCCCTGCAGCCCAGCTGCACTGCGTGGGGGCTCTCCATCTCCACGCAATCAGCAGGCGGAATCCCTGCCCTGGAGCGCCCTGGCTCTGGACTGCACCCCCCTAGGGTTTGTCCTGCAGATTCCCCTCCCCATCTTTCTCTGCCACACACGCTTCCCTAAGCCGCGCGCGCCGCAAACTCAGTCTCGGTCCCCGCAGGTGATG +>mm8 +AAACTTCTTCTCCCCAAAGCCGGTGCCCCCGCAGTTACTTGGCTAGCAGCCTGCAGCCCACTCTCGGCAGGACGATGCGGGAGAGAGA---GTGGGGCGAGCAGG-TGCTGCCTTGCAGCCCTACAAGGCTAGAGGGCGGGAGAGTAGCTCGGGTTTCTCCCTGCCTTGGCGCCTGCCCCAGACCAGGGTGGCCAGACATGCTGCAGTGTCCCAGGCAGGTCATTCGGGCAGCATGTTCCGCACCAGTCA-GGGGGCCGCGGCAGTAGAGCAAGAGCAATCGCTCTC---TCTCCCACCTCTGCAGCCCGCCTGCATGGGGTGGGGGCTCAGTCTTCCCACGCGATCCGCAGATGGAATTCCTGCCTTGGAGTGCCCTGACCCCGGCCTAAGCCCCCAGGGGTTTCATTCTGCAGGTTCCCCTCCCAACCTCTCTC--ACACACATGCTCCCCTAAGCCGCGCGCGCCGCAAACTCAGTCTTGGTCCCTGCAGGTGATG + +>hg18.chr2(+):165249579-165250078 +GTTTTAGTGAAAACAAATTTAATATCATCTTGTTTGAACAAAGCTTTCAGAATAAGTGAGCAATTAAATTCTTAAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTAACAGTTTTAGCTTCAATGTAAATATATATTATTACTTAGAATATTAGCATCTGAACTATATAATGACTATTTTATCATTTTACTTGAATTAAAACCAGAATTTCTGGAACTTCCAAATAGTCTTTAAAGTTTTTCAATATAAACATAAACTAACCCCTATTCCTCTCTACATATCAAATGTGAAATAACTGTCACAATATATCAGCATTTTCACAGAAAGATGTTTAAGGCTTCTGGCACATAAAATGTGTAATTTCTGTGTGACAATGTCATAATTATATACAGAAAATATTTAAAATTCTTGTAGAATTTAAGTTCTAAAGATTAAAAAAACAAGAGTTCCATGTTAA +>mm8 +GCTTTA--GGAAA-AAGTTCAGTGTCAGG-TGTCTGAGC--AGTCTTTTGAATAAAAGAGGAATAAAATTAT-TAAGGAAGTCCAGGACACTAACACGTTCTAAACTTCTGGGCCACTGGAAGCCGACAATCAAGTACTGTTTCTCTCAACGATTTTGGCTTTCAGGAAAATATATATTATTATTTAGATGGCTAGCATCTGAGATACATAATGACTAACTTAGCATTTTCTTTAAAAAAAAATCAGGATTTTGCAAATGTCTGA------CTTCAAAGTTTTGAATGTGGACATAAACTAACC-CTATTCCTCCTTATAG--CAAAAGTGAAATAACTGCCACAATGTATCAACATTTTCACAGGGATA-TTTTAAGGCCTCTGGCATAGAAAATATGCAATATCTGTGTAACAACATCATAATTATATACAGAAAATATCTTAAATTCTTGTGCAATTTTACTTCTAAAGGTTAAA---------GTGTTCTATTTA + +>hg18.chr2(+):165249502-165250001 +TTTAAAAAGCACCCCAAATATACAACTTGCTTTTATTAAATTGAAAAAAAAATCCCCAAGAGGCAGATATCCCAGTAGTTTTAGTGAAAACAAATTTAATATCATCTTGTTTGAACAAAGCTTTCAGAATAAGTGAGCAATTAAATTCTTAAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTAACAGTTTTAGCTTCAATGTAAATATATATTATTACTTAGAATATTAGCATCTGAACTATATAATGACTATTTTATCATTTTACTTGAATTAAAACCAGAATTTCTGGAACTTCCAAATAGTCTTTAAAGTTTTTCAATATAAACATAAACTAACCCCTATTCCTCTCTACATATCAAATGTGAAATAACTGTCACAATATATCAGCATTTTCACAGAAAGATGTTTAAGGCTTCTGGCACATAAAATGTGTAATTTCTGTGTGACAATGTCAT +>mm8 +GAAACAACAGACTGTAAATATATAACTTGCTTTTATTAAACGGAAAAAGGTTTGTCAGGATGACAGATACTCCAGTAGCTTTA--GGAAA-AAGTTCAGTGTCAGG-TGTCTGAGC--AGTCTTTTGAATAAAAGAGGAATAAAATTAT-TAAGGAAGTCCAGGACACTAACACGTTCTAAACTTCTGGGCCACTGGAAGCCGACAATCAAGTACTGTTTCTCTCAACGATTTTGGCTTTCAGGAAAATATATATTATTATTTAGATGGCTAGCATCTGAGATACATAATGACTAACTTAGCATTTTCTTTAAAAAAAAATCAGGATTTTGCAAATGTCTGA------CTTCAAAGTTTTGAATGTGGACATAAACTAACC-CTATTCCTCCTTATAG--CAAAAGTGAAATAACTGCCACAATGTATCAACATTTTCACAGGGATA-TTTTAAGGCCTCTGGCATAGAAAATATGCAATATCTGTGTAACAACATCAT + +>hg18.chr4(+):187745932-187746431 +AAGCTCAAGTATTTTATTAATAATTTATTGTCAGTAAGAAAGACTGGCTAATGGTAGTTTTCATTAAAAACCTTTACAAGACCATTGCATCACAAATATACAGACACTATAAAAACTGTGTCATGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCGTTACACTTTCCAATAATGAAAAATGTTTATAATTCTAAATACAGCAACCCATGTAAGACATGTTCATGTATCTGATCTCTCCTTCATCCTATGTACAGCTAGAAATGAATGACTACACTGAAATGTACTAACAAAATGTCACACTTCAGTGGAAAAAGACAGAATGAAACCCTGGTTATAGTAAAAAAAAAAAAATCAGGGTGCTAGATAATGGCACTGACACCACCAAAATTCAGTTGAAACAAATGCACAAAATATCTTGGAAATCTAGTTAAAACTATGAAAAATCAAATCTGTACATAAAATTTACAAAAAAAAGAGACAGGAAAATTAAAA +>mm8 +AAGCTAAAGTATTTTATTAATAATTTATTGTCAGTAAGAAAGGCTGGCTAATGATAGTTTTCAGTAAAAACCTTTACAAGACCATTGCATCACAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAATGTTTATAATCCT-AATACAGCAACCCATTTAAGACATGTCCA-GTAACAGGTC--GTCCACACCCTATGTACAGCTA---------CACTGGACCGAAATGTGTCAATGAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAA-------TCA-GATGCTAGGCAACGACGCTAACACCACACAGATCCAGCAGAAACAAAAACACGAGGCGTCCTGAAAACCTAGGTAAAACTAGGAaaaatcaaaTCTGTACATAAAATTTACACAAAGAAGC-----AAAAATTAAAA + +>hg18.chr2(+):27572711-27573210 +TTTTTCCCGCTGTAATATCCAGTACAGTGTGTGCACACTTGGGGCTCAGAAGCTTCTACTGCCTTCCTTTCTGAGAGGAGAGGATAAAATGGGACCAGTGGGACTGACTGTGTGTGCTGAGCATGTGATCAAGCCATGGGCCAGGTCCTCTGACTTGTGCTGACTTGGTGACCCTGATCTCTGGCCTCGGAGGACACTTGCCCAGGGATTCTCACTGCCGTGGGTGTTGTCCTGCACTCCCAGGCTCCAGGTCCTCTGTAGAAGAGGGCATTGTCCCGGTAGGGCAAGAGTCCCGAGCCTCAGGTCTTCCTCTTCAGGGGCCAAAGCAGAGGCTGGCGAGTCAGGGTGCTTGCAAAGAGGAAGCCCAGGAGTTTCCCTGGGGTTACCAGAGGGCTGGGGGCCTAGTGACCAGGAAAGGGTGGTGCTCTGAGAGCCCAGGGTGCTTGGGTTAATCATCACTGGGGCTCAGATAAGGCCCTGCCAACTGGAAGCAGAGTCA +>mm8 +-CATCTCCTCTGTGATATCCAGTTCAGTGTTCGCACACCTGGGGTCCAGAAGCGTCTATTGCTTTTCTTTCAGAGAGGAGCAGATAAAATGAG-CCAGTGGGGC------TGCATGCTGA-CATGTGATCAAGCCATGACCTGAGTCCTCTGACTTCTACT--------GACCCTGATCTCTGGCCTTTGGAGGCATTTGTTCAGGGATTCTTTCTGACCTGGG---TGTTCTGCAAGGGCAAAA----------GCAAAGAACGT----CTGGTCCTCTTCTCCAAGGGCAG------------------------------------AGGCTGGCAAGCCAGAGTATACGCAAAGAGGACCCTCAGGAGCTCCTGTGGGCTGGCCGGCGACAGGAACGGGTGTTGA--AGAGAGGGGTGGTGTTTTGAGAGGC-AGGGTTCTTAGGTTAATCATCTCCATGGCTCAGATAAGACCCTGCCAACTGGAAGCA-AATTA + +>hg18.chr1(+):111758461-111758960 +GGTTCTTGTGTTTACAGTTTATTTAATGGAAAAGAGATTGGCCTATTCTGGTTTTGATGCCTGCTTTGCCCCGGGATGAGAAGGCTTCCAACATGTCACTTAGAAGAAAAGACAAGGGTTTTCCCTGGTTTCTGACACCAGAGGGGCTTAGGCTTCTTCATCCACAGCAGAGTTTTCTGGGATTTCTTTTTTTAGAGAAAGAGGACTTGTTTGAGGGGTTACTGAGTTGACAGAGGAATGGTTTCCATAGATGGGAACAAAGCGGTTGTCAAAAGCTAGAGGAGTTTGTTCCGGGAGCTGGATGACGGGGCTGGAGGACAGCATCATCCTGTTTTCAGCTTCCATCTGAAGACCCAAGTTACCCATCCTGGGGTGAGTGCCCACCTCAGAAGTCAAATTCTCCCCTCTTAAAGGCATAGTCTGCCCTTCAGGGGTGACTGATATGTTTCTGGAGGGGACAGTCACCTTTTCACGGGCCACAGCCTTCCTTCTAGGGGCC +>mm8 +GATTCTCATGCTTCCAGTTTATTCAATAGAAAGGAGATTAGCCCATGGTGACTTTGGTGCCAGCTTTGCCCCAACATGAGGTAACGTCTGTTGTATCACATAGAAGAAAGGACAAGTGTTTTCCCTCGGATTTGCCACCAATGGAGCTCATGATCTTTGATTCATAACAGAGTTTTCTAGGTTTTCTTTTTTTTAAGAGAAAGA-TTTGTTAGAAGGGCAATTGAATTGACA----AATGGTTCCTATCAGTAAGAGTGAAGCATTTTTCAAAAATGAAAGAAGTATATCATAGGAACAAGACAATAGAGCTGGAAGA----------------------------------CCAATTTCACCCATCTTGGAGTACGTTTCTACCTCAGTAATCAAACTTGCCCATTTTAGAGTTTTACTCTGTCCATTAGGGGTAGCTGACATCTCTCTAGGGGAAACAGTGGCCTTTTCAAGTACCATAGTCTTCTTCCTGGGAGTC + +>hg18.chr11(+):49124766-49125265 +TATAATATTCAACTTTATTTCAAATATACCAATTTTAAAATTTATCAATATACCCATTACGATTCTTTCTGAGTGACATACCACACAAATTCAATACGGATTCTCTAAAGAATCCTCTTAGGCTACTTCACTCAAAGTCTCTGCAGCTGCCTGCACTGTGAAGGCTGCAACATAAATCTGTCTCTTCACTTCTCCCCAGGCCTTGGAAGGGTCCACTTTGCTTTCAATATCAAACAGAGCATCATAAATTCCTGGGAATGACTCCCCTGCATACTTGTTGTGGCTGCTTGGAGCATAGATGACATGCCTGTTGATAAAATCGTTTGCTGTTTATTAGGTGCCCAAATGATATACAAGAGAAACACAAGAGCACTCTGCAATTCCTGGATTGCATATTCCTATAACAATTTGAACAAGCCACTTGTCAACTGAACTTCCAAGTTCAATCATCTCTGAAGACTATTATATGAAATCTATAGtaattaattatatttttatt +>mm8 +---attatCCACTTTTGTTTTGAatgtatgcatgtgtatatatatatatataAGCTCCATAGTTCCATAGGGAT--------------------TTTGTG-ATTCTGTAGAATGTGTTTAAGCTACTTCCCTCAGAGTCTCTGCTGCAGCTTGCACTGTAAAGGTTGCAATAGAAATCTGTCTCTTCACTTCGTTCCAGGCCTTAGAAGCATTGACTTTGCTACTTATATCAAAAAGGGCATCATAAATCCCAGGGAATGATTCTCCTGCATACTTGTTGTGGCTGCTTGGAGCATAGATGATATGCCTGTTGATGAAACATATCTTTGTCCATTAATTGCACAAGCAACATACAAGAGAATAAAGGCA-----CTATA---CACACATGTCATACTCCTGTCCTGGCTTGAATAAGTCACTTGTTACCTGAGTTT-AAAATGCAATAATATCCAGGCAC------------------ATAAATACATATAATTTTTGC + +>hg18.chr11(+):49124879-49125378 +CCTCTTAGGCTACTTCACTCAAAGTCTCTGCAGCTGCCTGCACTGTGAAGGCTGCAACATAAATCTGTCTCTTCACTTCTCCCCAGGCCTTGGAAGGGTCCACTTTGCTTTCAATATCAAACAGAGCATCATAAATTCCTGGGAATGACTCCCCTGCATACTTGTTGTGGCTGCTTGGAGCATAGATGACATGCCTGTTGATAAAATCGTTTGCTGTTTATTAGGTGCCCAAATGATATACAAGAGAAACACAAGAGCACTCTGCAATTCCTGGATTGCATATTCCTATAACAATTTGAACAAGCCACTTGTCAACTGAACTTCCAAGTTCAATCATCTCTGAAGACTATTATATGAAATCTATAGtaattaattatatttttatttcaaacaaataaattaaaGTGGTTCAGTGCTACAAAACTAACAATGATGATAGTAACCACAGCAATCATTCTTGGTATTTAATGtttacttgcaatttttctgatgtttagaa +>mm8 +GTGTTTAAGCTACTTCCCTCAGAGTCTCTGCTGCAGCTTGCACTGTAAAGGTTGCAATAGAAATCTGTCTCTTCACTTCGTTCCAGGCCTTAGAAGCATTGACTTTGCTACTTATATCAAAAAGGGCATCATAAATCCCAGGGAATGATTCTCCTGCATACTTGTTGTGGCTGCTTGGAGCATAGATGATATGCCTGTTGATGAAACATATCTTTGTCCATTAATTGCACAAGCAACATACAAGAGAATAAAGGCA-----CTATA---CACACATGTCATACTCCTGTCCTGGCTTGAATAAGTCACTTGTTACCTGAGTTT-AAAATGCAATAATATCCAGGCAC------------------ATAAATACATATAATTTTTGCTTTAATGAATAACTCAAAGTGGTTCAGATAAATAAAAATAACAGTAAGGACAGT--TGATGTTAATTGTGCTTAATACTTAAAAACAACTTATA-TTTTTATAGTTACTAAAA + +>hg18.chr7(+):26298700-26299199 +GAGAAGGCCCAGGGGAAAATCCATATAATTGACTGATTATCAGATTTGGTGACCAGGAAAGCAACAGCCTGTTTTTCAGTTCCGATGCATCATACTTTTCTCAAATTACACGGATTATTGAGGGGGATCGTCACGGAATGGGGAGCAACATGTCCTGCTGAAAGGAAGGGCTTCTATCTCTACAAGACACGTTAAAaatgatggtatcagaaaattagaacggggaggaggcttgcacatgatctccatcaaacctttcattttacagacagggaggctaaggccgagggacgctgagtgttgggaccaggatcattcagccagatgggagcagaaccaggcctacaacctggcaggcttctgacttccaccccgGAGTTATGTCCACCTCTGGGGCCTGGGAACTGGGTTTGGATTGCATAAGCTCCCCCTCCTCTCCCAGGAGGGGGCTGGGCTGGAGGCTGAGGCCTTCGCCAGGAAGAAGCAGGGACTGCTTGGA +>mm8 +GAAAAGGCCGCGGAGGAAACCCACGCTGTGAGCTGATGATCGGGTTTGCTGAGTTGGGAAGCAACAGCCTGTTTATCGGTTCTGACACATCACACTTTGCTAAAATTACAAGTATTGTTAA-GGGGATGGTCACGGGATG-------------TCTGCT-------------------TCCGCAAAGCACATGGAGAGCGATGG-ATCAGAAATTGAGAACACTGA------TCTTTCGTGATCTCCATCAACCCTTTTAGTTTGCGACAGGGGAAACCAAGGTCTGCAAGGGTGGAGC------------AGCATGCA-CCCGGTGGGAG-------------------------------------------GGGTGTGTGAAAATCCCTCTCGTCCGGGGAGTGGGCTTGT---------------------------GGGAGTGGCCGGAAGTG-GGCTGGGGGTATT------------ATGGAACTCCTTCAA + +>hg18.chr7(+):26297541-26298040 +CAGTTTAAGTGATGATTGTGGTTTCCCATGCAAACAGGTGTGGGGACCCAGCCTCAGGTGCCATTTGGGAAATGCTTTCCTCAGTCAGGTCCCTTGGCAGATCTCATTAGCTTTCCCCCCAAATGTTTTATTGAGACATTTCAAACATAGACAAAAACTGAAATAATTTTATATAAACACCATAGCCCACCACCTAGATGCTATGAACATTCTGCCATTCTTGTTTATCACGTTATTTATCCGTCCTCCTCCCCATCGGCAATCCTCCCCATAACTGTGGGGTCAGGGTTAGGAAGCTTAAGGTGACTCAGGTGGCGAATTCCGAAGGGTGCCGCTGGAGCACCTCCAGCCTCAACGTCCGGACTAATGGGGGCATTTCCTCCCTAACTCAATTTCAGGAAGCAGGAGGCTAGCTCTGCAGGGTGGGGGCGCACCTGGGCTGGGCTGCGCGGAGGCGGCGGAAGCACTAGGCGCGGCGCCCACAGGCGGACGGCTGGCG +>mm8 +-----------------------------GCACACAGGTGGTGAGAGCCAGCTCAGATGATC-TATAGGAA---------CCGGACATAT-CTTTGGCAGATCTCA-TAGCTTTCTCCTCATCTTTTTTAAAGGGAGATATTAAA--------AATATTG--------TTATACAAAAGTAAT-GCCCTCCATCGAGATCCTGCTAACATCTAGTCATGCTTGTTTGTTATTGGCTTCTCTCATCTTGATTCC------------------TCACTGCTGGGT--------------------------AGGGAGAAAGACCCGCTAGCTA-------------------------------------GGTGGCCTTTCCTACGTT-------------------AAGGCTGGCA----------------------------GTggcg-------ggtgggggtggggggc----------------ggcggcgggcg + +>hg18.chr16(+):80625865-80626364 +AATATCTTCCTCTACTTTCATATCCCTCTCCATCCAACCCTTCAGCCTGCCTCAGTTGGGATTTGTAGGAGTCCTGAAGCTATGGACCAGATCAGAGGTGCCTTCCCTTCCAGAATCTATTTTCCAAACTTCATCGATTGCCTATATTTATATGCATGCATGcacacacacgcacacacacacacacacTCTCACTCACTCCCGAGTCAGAAAAAGGACTCAGCACCCAGACATACTGCAGGCTCTTGAAGAAGACAGTATTTTCCTGTGAGCTAGAGGATCTTCCTGTTATTCTCCATGCAGTTCAAATTCTGTCAATTATTATCCAGTTAGTCATCGCTCCAGAGGTGGACTGTCATTAAAAAAAAATAGAAGGTGTGTGTTTGTGGGTGAGTATGTGCATGTGTTGTGTATGCAGGGGGTGGGGAGGGGCGAGAGCGGTCAAATAGGAAGTGCCTTGGTATTTATGTTGAAGTGCACACTGGTTTAAATTACCCAC +>mm8 +AGAGCCTTTTTTTGGCT-------------CATTGAGCCCTTAA-CCTGTCTCAG------TTGGCAGTAGTCCTCCAGATACAGGCCAGATCGGGGATGCTCTCTCTT--AGAATCCACTTTCCAAGCTTCACTGATTACCTGGAT-------------AacacacacacacacacacacacacacactcacacatacagatcacTCGGAAAAAGAACTCAAC------CAACACAGGAGGCATCCAAAGGAGA---------------------------------TTGTCTTCTT-----TTCCAAGTCTGTCAATCATTATCTGAGTAAACATCTGTC---AGGTGGGA------------------gtaggtgtgtgtgtgtatgtgtgtgtgtacgtgtgttgtgtgtgtATGTGTAAGTGTTGAG-------TGCCTTAGGGGAATGAGC-AGGTATTTATATCACAGTGCACA---GTTTAAATTACATCC + +>hg18.chr19(+):54159879-54160378 +AAGGATCCGGAGACTCCTTATCTCGCAGCGCAAACCTCAGGCAACTACAGGTCCTCCCTGCACCTTTGAGGTGCCCCTCCCCCCACTCAAGGTTCCAGAAAAATCCATGCCCTCGGAAACCCCAGAATCTTACTTTCCCGAGGCACCCCAGGACCCCAGGGTCATCAGTTCACAGGGCTGTTAGTGCTCCCATAAAACTCTAGCCTCCCAGAGGGACCCCAGCCCCCACCCTCCCGCCCACGAACCCCTGCATTTCCAGAATCAGCCCCAGGGCCCCAACCCCCCCAAGCCCCCATTTCACAACACGCTGGCGCTACAGGCGCGTGACTTCCCCTTGCTTTGGGGCGGGGGGCTGAGACTCCTATGTGCTCCGGATTGGTCAGGCACGGCCTTCGGCCCCGCCTCCTGCCACCGCAGATTGGCCGCTAGCCCTCCCCGAGCGCCCTGCCTCCGAGGGCCGGCGCACCATAAAAGAAGCCGCCCTAGCCACGTCCCCTCG +>mm8 +ATGACGTGACATATCCCTT------CATTGTGTGCATTGGACATATGGAGGTTCCCTTTGCATTACAGAATTACCCCACACTCAGCCCA--TCCCCAG----ATCCATGTTCTC--AGGCCCCAAAA-TTCTCTTTTGTGAGACACCAAAGGACCTCGAAGTCATCCCCTCCCCAGGGTCTCAGTGACCCGGAG-----------------------CCCAG----AACCCT-------GCGACCCC-------TCCAGGTTGCGCCTCCGGATCCGGACCCCCCCAAGCCTCCATTTCACAA-GGCCTCGCGCTCCAGTCCCGTGACTTCATCTCACTGGGTGGGTGGGGAGCGAGGTTCCCCTCAGCTCCGGATTGGTCAAGTATACTTTTCGTCTCCGCCTCACGCCACCGCCGATTGGTTAGTCTCGGGCCTGGGGCACCCCTCCTCCGGAGGTCAACATGCTATAAAAGGAGCGCTCCTTGCCGGGACTTAGAG + +>hg18.chr16(+):55552764-55553263 +AAAGTCTACATAGAGGACTGTTTCTGGggtacccagatgcagcgtcaaatgccatggaatactacagtgaggacattatcctttcaagctttcaaatcagagcaagggaaaggtcgatgctagagtttctctagcacccatgaagccctctccctttttctactgagttttactttacaggcaacagcaggcttcaagcttggggtcattgtcgggcaacagtatctggcaagaattcaatgtctttttctcatagtcattgtattttggcctctttctatttatggcaactgagagagaaagcttattcctagatatatgtatttaagtaaaaaataaatgaattcatggaaacatattaagcaattatccagataacataagggatggcaaaaatggtgcagatggtGGAGGGGAGACAAGTAGAAGTTGGGGTGCTCTTGTTGAATGTCTGGCTCTGAACTCTAGAGGAGGCCGCAGGGGCTGGGCAGGAAGGAGG +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr3(+):187840344-187840843 +CATTGTTTAAAAATAACTTAAATGATGATAAGTAGAACATTTTCCACCCAGATGGCCAAAGTGCTTAAGGAATCTCAACTGTGCTTCTGGCAGATGACTGTGGGGTTCAACTACCTCCCTGATCTAACAAGGGCTTTGCACACAGAGTGTCAGCCAGGAAGTCTGAATTCACCAAGCACCACTGGGACATAAGATAACTATTAGAGTGGCCAAGGAGACCTCCACAGCAAAGGTGTTAGGGGAGAGGGGGAGAATGGGACAGTCCTCCATATTCCTATTCAGGAGGGGACCTGCAAATCAGAATCTAATCATAAGAGCCTTGAACAAATGTTATGATTTCTCAGGAAACAGTTGGGAAACTTAAATTCATTTGTATGTACAGGTGGATATGAGGTTGCTCAAGGGTCTAAGGTTAGAATCATTGGGAAATGCTATCCAAAGTACTGACTTAGGAAAATCCAAGTTCAGAATTCAAGGTGAACTTGGTTAGCCCTTCCAG +>mm8 +T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGATCAAACATTATAATTCCT-GGGAAAGGGTTAGGAAACTTGGATTTATTTACA--------CGAAA---GGCATGCTC-CGGATCCAAGGTTAGAA-CACTGACAAATCCAATCCAAAATATTGACTCA-AAAACTGCTTGTTTGGACCTCAGGGCAAGTCCTAGTAGGCTATTCTG + +>hg18.chr3(+):187840445-187840944 +GGGGTTCAACTACCTCCCTGATCTAACAAGGGCTTTGCACACAGAGTGTCAGCCAGGAAGTCTGAATTCACCAAGCACCACTGGGACATAAGATAACTATTAGAGTGGCCAAGGAGACCTCCACAGCAAAGGTGTTAGGGGAGAGGGGGAGAATGGGACAGTCCTCCATATTCCTATTCAGGAGGGGACCTGCAAATCAGAATCTAATCATAAGAGCCTTGAACAAATGTTATGATTTCTCAGGAAACAGTTGGGAAACTTAAATTCATTTGTATGTACAGGTGGATATGAGGTTGCTCAAGGGTCTAAGGTTAGAATCATTGGGAAATGCTATCCAAAGTACTGACTTAGGAAAATCCAAGTTCAGAATTCAAGGTGAACTTGGTTAGCCCTTCCAGTTGTAACAAAACCGCTCAAGTCTGCCTTAAAGAGCCTTACAAGCCAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTCTCCACAGAA +>mm8 +-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGATCAAACATTATAATTCCT-GGGAAAGGGTTAGGAAACTTGGATTTATTTACA--------CGAAA---GGCATGCTC-CGGATCCAAGGTTAGAA-CACTGACAAATCCAATCCAAAATATTGACTCA-AAAACTGCTTGTTTGGACCTCAGGGCAAGTCCTAGTAGGCTATTCTGTTGCAGTAAAGCTGCTCAAGTGAACCTTGAG--GCCCCACGGCAGGGCTCGTCCTGGCAGCTCTAT--ACTGACACATCCTGGATCTTGTTCCCCACAGAA + +>hg18.chr4(+):25358148-25358647 +GTAGTCAATTGTATAAAAATAATTTTATTTACTACTGTAAATAAAGTAGTGCAAAGAGTAGTTTGGACCCACAATATTGCATTACTGATTTATTCACTACCTTAGCAGCATGTAGTATACAGACATTCTGCTCTTCCTCTTCCTCTCTAacacacacacacacacacacacacacaTATCCCTGTACAGACTCACGCAGGCATGAGGGGTAGGGATGAAACTATAAGCTAGAGGCTTACTTGCTGCATATTCCGTTGCTGCCAGTCTATTCTAACGTGTAATTCATGGAGAAGACTACAGTTAAGTACTAAGAATCTTCTAAATGTAATTTCATGGATTGCAATTGAAATGTAAAAGATATCCGACAATGCCATTAAATGATTCGGAAGCACTAGGACCCTAGAAAAATTCAAGGAGAAAAATGTAAACCAATTTACAAAGCTATTGCCCTCCCTGCATTTCCAGGCACAAACAATTTATTTCAAGGTGCCTTATAACT +>mm8 +GTAGTCAACTGTAGAAAAATAATTTTATTTACTACTGTAAATAAAGTAGTGCAAAGA-TAGTTTGAACCCACAGTATTGCGTTACTGATTTATTTACTACTGTAGCAGCATACAGTGCACAGACACTCTGTTCTTTTTTTGTCC-TCTTACACAC----ACTCTCTCTCACACACACACACCTATACAGACACAGGCAGGCATAAGGGGTGGTGATGAACCTATGAACTAACAGCTTGTTTTCTGCGTATTCCATTGCTGCCAGTCTATTCTAAT-GGTGACTCATGAAGCAGACTACACTTAAACGGTAAAGATTTCCTAGATGTTATTGCATGTGTTATGATGGAAACATAAACGATACCCAATAATGTCATCAAATGATTTGGAAGCACTATGACCCTAGAAAAATCCAGGGGAAAAAATGTAAACCAATGTACAATGTTATCGCCTTCCCTGTGTGTGGAGT--------GTTTGTCTCAAGGCTCCTTCTAGCT + +>hg18.chr3(+):113535219-113535718 +TTCCAGGCTCGCTTTCTCCGGGAGAGCTCCTGCGTCTCCTCTTTGTTATGCAGCCCCTTTCTCCCTCCTAGCCCTTGCCTGGGGGAAGCCATGAAGGATCAGTTAAAGCTGAAGCTACACTTGAGAGAGCTGAAATGCTCTGTGATCATAATGCTTTGAAGGGTTAACCCCGGGTATCTAGAGAAACAGACATTTTGTTTATTCGGAACCAGCTTACAAGACAAAAAACGGAGAAGGTTTTCATATATCCCATTGGTATATGAAATCCAAATACAATGGTATTGGTATAAGAATCCAAATACAGTGAATGCCTCAAGATAATTTTTTCATGTATGGTTTGTTGGCAAGACCACATAGCCAATGATTTCACTGTCTTTCTTAACAAAGGAGAATGGTGGTCTGTGAGCTACGGTCTACTGCAAGCTAGATGCTGTTAATCTTCTTTGTAACTATCCTTCTAAAAATGAATTATTACCTCGTTTTACACATAAACAGGCGG +>mm8 +TCTCG--CTTGCTC-------------------------TCTTTCTCA----CCCCCTCTCTTGCTGCTGCTCCTTGCCT--AGGAAACCATGAAGCATCTAGCAGTACTGCAGC-------GAGCAAGCC--ACAGCTTAGTGGTCTT-------------GTTATGCCAAGGTATTTAGAGAGGCCGACATTTTGAGTCTTTGGTACT-GTTTACAAGGCAGAAAAAAGGAAGGGTGGTCATACGCCTTATT----------CTTTATACACACGGA-ATTGGTATGCGAATCTAAACGCAATTAAACCC--CAGGTACCCTTTTCATCAG------GCTGACAAGACC----GAC------TTGTGTTACCTTTCTTAACAAAGAGGAATGTGG-----------------ATCTGTCAGCTAGATGCTCTTAATGTTC-AAACA---------------AGGAATTGCTTTC-TGTTTTACAAAGAATCGGAGAG + +>hg18.chr3(+):113534107-113534606 +-----------------------agaagaagaagaaggagaagaaggagaaggagaaggGAAAAAAGAATCCTCATCATTAATGCAAGTGGAAGGAAACTCTTCACCAAAGAATTGATCACATCATGAAAGGTGAAATCATTACGGAATTGCTTAAATATATAATTTGAATCTGGatttaaaaataataaatgtaagttttttctttaaaaaaaaaaaaaaGTCCATTGGTTAAATTCAGCTTGAATCCTTTGCCACTACATCAAGAGCTAACAGGTCAACAACTGATCTCCACAACCTCCCACCTCATTTCCTTTCTCAGTCCAGGTAGCAGGAAAATGGAAAAAAAAAAATGATTTTTTTTTTCCAAACACTTTGTCAGTTTCCCCAGCGGTCACCTTTGAAAAGGGAAAAATGTCTGAAAATAGACAAAGCTGAATATAAACATCATTTAATTCCCCCCACACAGACAGCCTCCGCTCCTGTGAGGGCGTGGGGAA +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr15(+):40483770-40484269 +gcttcatcaatgaggtgatgtatgtgaagtgtctggcacagcatgggcactcaaACAGAGGTGCTTTTTCACACTTTAcaccttacaaggtacttttcacatgtgtcatcgcgatacttgcaaggttgctgagaggtagatggggttataatccctggtgttcaagaaaggaagcagaggctcaatggggttgaatgacttctctgagttcacagagctcagtaagtggcagggttggaactcacattcagactctctgactccagacttaggtttttccgcacctccacgctgAGGCCAGCCCCAGGCAGTGAGAAGCCCAAAGTCCGAAGCACAGAGTGCTGTGTGTTGGGCTCTGTGTGTTGAGGAGTCTTGTGACTGCCTTGGGGCTTTGGGCTGTAGTCAGCTGACAGTCCTTTGTGCTCTGTGGGGATGACGTAGGCCAATGGGAGGACAAATGCCCCTCTGAACTGTCTTCTGGGCAGTGACAGTCATGGTC +>mm8 +gtttaatctataagctcacacatgtgaaatgTCAGGTGTAGCATGTGCAT-CACAAGGG-----------------TA----TTTCTAGATATCCTTCATGACTGTTACATCATTTCTT-CAAACATTTGGAGAAGtggataaggttgtcatcccagcttttcactcgagaaggtggtggctcagtggggttaaatggcttccttgcactcctggag-gcaggaagtggcagGTAGGG-----AAGTTTAGAGTCTC--------------------------------------------------------------------------------------------TCGGTGTAATG----GAGGAGACTCAGGTCTGCCATGGACCTTGTGGCTGTAGTGACTTGACCC-------------------------------------AGGACAAACGCCCCACTGAGTGTCTTTC-AGGTAGTGACTCC-ATGATC + +>hg18.chr15(+):40427094-40427593 +CTGCAGTGAGTGAGGACAAAAGTCATCTGTCCAAACCAAGAAACCACCATCAGTTATACATACACACATACACAGACTTCTGGGCCCACTCACACAGACAGAAAACTTCACTCTTCAGCAGGGTTCTGGAAATAAGCATGTATATACTACACTGATAGGAAAATTTAAAATACAAAATAGGAAAAGCCACTTATAGGATGGGCAGAAAGGAATTCATCACTTAAGAGGAAAAAACAGCAAAGACAGGTATAGATAACAAACCAATGAAGGGTGGGAAGTTTCCCTAATAATTAAAAAGTGGACCATTCTTCAGCGTTAGAGCTCTTTTCCTTTTAATGCCAGGACCCCCATATTTGCCATCTCTGTGCCCCAAAATTTATTTTGCCTACAAATCCGTACTTGTAGACTGTGaattttataaaatgaaatatttttaaattCTACCTTGAAATTTTCTTATATGAATACTGCTTCCCTGAGCGTGCTGCTCTGTTACAGA +>mm8 +--------------GGCAGAAGTCATCTCCACAGACAGACAAACC---CTTTGTTCCACAAGT-CCCAT-----------TGCACCTACTTACATAAACAGAAAAATCCACTCTGTAGCAAGTCTCTAGAGTAACATGCTTGC-TATTTTATTGAC----AAGTTGAAAATAAGTCTTTAGAGGGGCCTCTAACAAGATGAGTAGAATAAAATTCATTGTGTCAGTGAAAAA-GTGGCAAAGACAGGTAGAGATAATAAG----TGGGGGGTAGGTAATTGCCCAAAT-ACCAAGAGATGGACTATTTTTAATTTTTTCAGTTCATTTTCTTTTCATCTCACAGTCCCCATGCTTGCCACTGCTCTTGCCACAGATATTCTTTGCTT--GAGTTTATATCTGTAAAGAGTGGATCTCATATCGTGAAATAC-----------ACTTGAAAAGTTGTCCATAT-AGCATGTCATTCCTGAGAGTGCTGCTGTGTTACAGA + +>hg18.chr15(+):40481381-40481880 +TGGCTTCCTCAATACCCAGTGACCCACAGAGCTCCTGGTATCAGGACCACTTGTGTTTGTAACAAGCAAAAAATACCAGGGGGGGCATTAGAGAGGCAGTGGAGCGGGCCTGGCAGAACAGGTGCCTGGGGGTCAGGCTTCCGCATGCGGGCTGCAGTTGCTGGCATTGCCTTCCGCAGGCTCCTCATCCTCATTCACATCTGAAGCATCTTCCTTTCTGTTTCTTCTCAAGGTTCCCAAAGAGGTATAGCAGCAGCAGCGGCCAGCAGTTGTGTGCAGCACTACCCAGGGGGCCCCGAGTCTGTCTGTGGCTCGTCGAGAAGCTTCCTGGTGGGGTTTGTGGGCAGGACTGTGATAGGAGAGGGCCTTGCCTGTGTTATTTCCACTGCAGAGCAGGTGCCTCAGGGCATTGCATGACCCATGACTACCACCCCCAGGATGTGCACTTTCTCCCTCGCACCAGACACTGCACGTCACACACATGCCTTTGCACACTCAC +>mm8 +TGGTTTTTCGTGTCCCCAGTGACCAACAGGGCTCCTGCTCTCAGGCTCACACATGTCTGTCACCAGT-GTAAATACCA-CAGTTGCA-------GAAGGCAGGACGGAGCTGGCCGGGTGGTAG-CAGGAGTTAGAGCCTACTCATGTGTCT----------GGCATTCCCTTCTGCAGACTCTGTACCCTCATTTACATCAGAGATG-TTCTTTTTCTATTTCGCTTCCAGGTTCCCAAAGAGGTATAGCAGTGGCAGCGGGCAGCCGTGGTGTGCAGCA-TTCCTTGGGGGTCCTAAGTCTGTCTGTGGCCCCCTAAGAAGATTCCTGGTAGGGTTGGTGATCGAGGC--TGATAGGA--------------------------------------------------------------GGGTACCACGCCCAGAATGCACGTTTTCTCCCTCCCACCAGACACCGCACATCAAACACACACCTTCCCACACTTAT + +>hg18.chr15(+):40457707-40458206 +cctgtgggtaattaatctggttgcccccaccccggggggagctatcctgccgtgagtgatcaaaagttagttttaggaccacatgagtaaacaagctctttagataaactcctctacattcctatgtatctgtgccctaagctattaagtggattcggctgccttcagccaaacactttatgcaaacctctaggccttccaagagggtttgtgtttatatcctataaattcatcttaaaatttttgccaccagcctgactgaactcccaaaagtgataacctctccttcatttttaatattagtaatttgtgttttcatttttcttgtttagcatggctaaaggtttatcaattctattgatctttccaaagaaccatttttgttttcattgactttctattgttttcttgttttttatttcattcatttctgctctgattttttattgtttcttttcttctgcttgctttaggcttaagtatctcttctatagtgtac +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr15(+):40438491-40438990 +ATTTTCTCAAATGAGGACTCTGCTGAGTAGCATTTTCCATGCAGACATTTCCAATGAGCGCTGACCCAAGAACATTCTAAAAAAGATACCAAATCTAACATTGAATAATGTTCTGATATCCTAAAATTTTAGGACTAAAAATCATGTTCTCTAAAATTCACAGAATATTTTTGTAGAATTCAGTACCTCCCGTTCACCCTAACTAGCTTTTTTGCAATATTGTTTTCCATTCATTTGATGGCCAGTAGTTGGGTGGTCTGTATAACTGCCTACTCAATAACATGTCAGCAGTTCTCAGCTTCTTTCCAGTGTTCACCTTACTCAGATACTCCCTTTTCATTTTCTGGCAACACCAGCACTTCATGGCAACAGAAATGTCCCTAGCCAGGTTCTCTCTCTACCATGCAGTCTCTCTTGCTCTCATACTCACAGTGTTTCTTCACATCTATTTTTAGTTTTCCTGGCTCAAGCATCTTCAGGCCACTGAAACACAACCCTC +>mm8 +ATTTCCTTGACTGGAAATTCTGCTGAGTGGCATTTTCTACCCA----GTTGGACTGAAAGCCGACTCCAGAACATTCTAGAAAAGATACTGGCTCTAA---------------------------------------------------------------------------------------------------------------------AATACTGTTTTCCATGTATCCAGCGGCTGCTGCTTCAGTAGCCTGCATGACTGCCTAGTCCTTTACACA---------CTTTGCTGATTTCTGGTGTTCAGCTGTCTCAGACA-----CTCTCACTTCTTGACAAGCCGAGTTCTTAATGTCAACAGAAATACCTCCAGCTAGGTCCTTC-GCGACCACTCAGTCTCTGTGGCTTTCATGATCACAACCTCACTTCATGTCTATTTTTAGTTTTCCTGGCTTAAGCTTCTACAGGCCACTGAAACACAACCCTC + +>hg18.chr1(+):120055534-120056033 +tttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccatattttcttaatccagtctatcattgttggacattttctttttgatagtcgaattcccttcaacgtctagcacagtgccttgcacatttacccactcaaaaaaaatttcgtaaggaattaataaatGAATCCTTAGGAGGAAAAGTGAAAATGAAGTTTTTCTCTCAGGATGAGGTGTATTTCTCCGTTCATTTCAGATATGCATCAGCTAGTCAGCGTAAATTGTGCTTTTTATATGCTCACCAGGTGTAGGTAAGAGCTTTGGCTGAGATGGAGAAATTCATCGCGGGAGGATAATAAAGCGGGCAGGGATTTGGCAACCTCAGAGCCGCGAGGAGGAGGCGGAGTCGCGGAGAGTTTGAGTATTTCCGTCCAATCAAAAGGAGACTGTAAGAGG +>mm8 +-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATG-GTCTTTAAGAGGAAAAGTTACTATGAGATTTAATTCCCTCGTGGCAGCGTATTTC--TGTTTATTTCCAATATAAATCAGCCTGCTGGCATAAATCGTGCGTGTTA-AAGCTCACCCGGGGCAGGTAAGGGCTTCA---CTGCTGGA-AGTGTAGTCTGTGTAGGataaaaaaaaaaaaaaaaaTGTGGGAGGCTCTGCCC------GGGGAGGCGGAGT--CAGAGAGTTTAAGCATTTCTGACCAATCAAAAGGAGACTGTTGGCGC + +>hg18.chr1(+):120063274-120063773 +AAATCAGAATACCTCCAGGTGCTCACCTGGTGTTGGCCTCAGCACTGGGGCAGTCAGCACTGAGGTGGCTTCTGTTTGATTCCTCTAAGCCCTGGGTGCCCATGTGACTTGTATACACCCAGGTCATAATCAGTTTAGCATAATGCCAGATACGTACATAGCGGGCATCCGATAAAATGAAGGAAGAAAAGTACAGGGGAGGGGAAGGGAAAGtaggcaggcttaactttgttgggcttcagtttttcctctgtaaaatggagttggaccagatgctggtgaacatttcttcaaatctcccactctgacgttctGCTTCagaacctcagacataaaaggatttggagtgtcttccaggccgcctgcatgtttctctctgctggtaggcacagcccccaagcagtgaggatgtgtgatgcataaacacctccagaggaatcgttctactattgctcttgaacaattcttccagtgtttagaagctcttaaggcttaaata +>mm8 +------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- + +>hg18.chr6(+):159106769-159107268 +CCTTTGCAAAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCCTCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAACAAACAAACACAAGCAAACAGAGTCTCTTCACAGCTGGAGTCTGAAAGCTCATAGTGGCATGTGTGAATCTGACAAAATTAAAAGTGTGCATAGTCCATTACATGCATAAAACACTAATAATAATCCTGTTTACACGTGACTGCAGCAGGCAGGTCCAGCTCCACCACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAATCTGTATTATCACTTGTATATAAATAGTATATAG +>mm8 +GCCTTGGAGAGCTTTTATTGTGTGTATCTGGTGCGGAGT-CACCCGCACAGGACATCACAACCAAGGAGGC-----TAGTCCGCGAAAGGAAGGAAG---------------------ACAAACTG-----------------AAAAC--GGGA----ACAAGTTGCTCACAA-----------TAAAGAGCGTCCCTTCAGGGCTGGAGTCTGGATGCTCTCGGTGTCAAATAAGAAACTGACAGAAATGGAAGTGTGCAT-----TTTACGTGCACAAAAC-CCACTAACATTTTTGTACAGTGGTGATTACTGCAGTCA---TCGGTTTCCCGACTGCCCCTGTG-----TCAGATCAAGTGTCTCGG-TTACATGGTTCTTAATGTTGAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAACCCATATTATCGCTTATATATAAATACTATATAG + +>hg18.chr6(+):159106768-159107267 +GCCTTTGCAAAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCCTCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAACAAACAAACACAAGCAAACAGAGTCTCTTCACAGCTGGAGTCTGAAAGCTCATAGTGGCATGTGTGAATCTGACAAAATTAAAAGTGTGCATAGTCCATTACATGCATAAAACACTAATAATAATCCTGTTTACACGTGACTGCAGCAGGCAGGTCCAGCTCCACCACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAATCTGTATTATCACTTGTATATAAATAGTATATA +>mm8 +GGCCTTGGAGAGCTTTTATTGTGTGTATCTGGTGCGGAGT-CACCCGCACAGGACATCACAACCAAGGAGGC-----TAGTCCGCGAAAGGAAGGAAG---------------------ACAAACTG-----------------AAAAC--GGGA----ACAAGTTGCTCACAA-----------TAAAGAGCGTCCCTTCAGGGCTGGAGTCTGGATGCTCTCGGTGTCAAATAAGAAACTGACAGAAATGGAAGTGTGCAT-----TTTACGTGCACAAAAC-CCACTAACATTTTTGTACAGTGGTGATTACTGCAGTCA---TCGGTTTCCCGACTGCCCCTGTG-----TCAGATCAAGTGTCTCGG-TTACATGGTTCTTAATGTTGAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAACCCATATTATCGCTTATATATAAATACTATATA + +>hg18.chr6(+):159106766-159107265 +GTGCCTTTGCAAAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCCTCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAACAAACAAACACAAGCAAACAGAGTCTCTTCACAGCTGGAGTCTGAAAGCTCATAGTGGCATGTGTGAATCTGACAAAATTAAAAGTGTGCATAGTCCATTACATGCATAAAACACTAATAATAATCCTGTTTACACGTGACTGCAGCAGGCAGGTCCAGCTCCACCACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAATCTGTATTATCACTTGTATATAAATAGTATA +>mm8 +AAGGCCTTGGAGAGCTTTTATTGTGTGTATCTGGTGCGGAGT-CACCCGCACAGGACATCACAACCAAGGAGGC-----TAGTCCGCGAAAGGAAGGAAG---------------------ACAAACTG-----------------AAAAC--GGGA----ACAAGTTGCTCACAA-----------TAAAGAGCGTCCCTTCAGGGCTGGAGTCTGGATGCTCTCGGTGTCAAATAAGAAACTGACAGAAATGGAAGTGTGCAT-----TTTACGTGCACAAAAC-CCACTAACATTTTTGTACAGTGGTGATTACTGCAGTCA---TCGGTTTCCCGACTGCCCCTGTG-----TCAGATCAAGTGTCTCGG-TTACATGGTTCTTAATGTTGAATTCTTTTATTCTGTAAAAGGTAACAAAATATACAGAACAAAACTTTCCCTTTTTAAAACTAATGTTACAAACCCATATTATCGCTTATATATAAATACTATA + +>hg18.chr9(+):111041832-111042331 +ttaagcagagaggtatttattagagggtattatatggcatacacaatttccaggagcccacagataagggtttggatgccttcctgccaggaagagcacaagtagccaggacaaacacgtacctttacaggactattactgaggaaatcccactgccaccactTCTCTCTACTCAGCACCTGTGACAGGCAGGACAACCTTCACCAGAGTTGCCCCAGATGAAGAAAGGCATCAGCTGCTGTGCCTATAAGATCCACTCTTGCCAAGAGCAGCCTCATTCTAGGATGATCTTGCTCCACCCACCTAACTGAATGCTCACCTTCAGACTTCCAAAAGCCAACTGTTCTGTTACCAAGGTCATTCACAAATGAGACTTCTGCATAGCAACAAGAATCAATTTAAAAAAAATGAAGATGGAGTCAAAAAAAAAGCAAGAATAATCTTTATTCCTTGGAAACACATTTGTAAAAATGCTATCAATAAGATGAAAAGATTCAGA +>mm8 +TTAAGCAGAAGG--CTTTGATCGA----------------GGATCATCTTTAAGAAGCCACAGACAGA-----------------GCCAAGAAGAG-GTAAGCAACCACGAGAAGGTGTACCCGTCACAGGACTGTTATCAGGGAACACCCA-------GGTGTCTCTCTGCTCTGCACATGGAACAGGTACTGCAGCCTCTTCCAGAAGCGCATCGG---GAGAATCACCCCAGTCACTGTACCTATA-------------------GGAGCCTCAGTGAAGGATGGTTTTGTCCCAACCACATAACTGAAGGTTCACCTTCGGA-CACCCTGAGTCAACTGTACCATGAGTGAGATCA-----AAGGGAGGCTTCTGTGCAG----AAGAATCAAC------GCAATGAAGATGGAGTCCAAAAAAAAACAAGAATAATCTTTATTACTTGGAGACACA-TTGTAAAAATGTTAGCAGTAAGATGAAGAGACCCAGA + +>hg18.chr9(+):110974075-110974574 +GAAACCATGGAATCCTCTTATTTTACTGGTTAGAGGTGAGCTGCCAAAGGTACTGGGTTTCAAATACAGTAACAGCCAACTTGTTTGTGGTCAGACTTCCAGTGACGTCAACCTTCAGAAACTTCAACATCTGTGAACTCTGGGGGAAGCGGGGAAGAAGCAGGAAGCCCAGAGCCTCCTGGAAACACTGGCCAAAAAGCCCATGCATCCCTTCTTGGAAGCCAAGCAGATCTGACACATAGGAAATACTGGCTTTCCTGGCTTCCCCAAGAAACCTTCAGCTTTGCCCTGGAGGTTTCCATCAGCGAGCAGGAGGTGAAGAGCAGAAGCCTCAGAAAGCAGGTTAGAAGAGGAAGAGGGTGCTGGGTTGGCAAGAAGTGACAGCCCCATATTGTACGGGAACATATTTTGTATCATGTGCACAAGATAAAGAACAGCTAAAGCTGTTTTAAAAGTATAGCCGGGGGACATAGGGGTAAAAGGACCCAAACGCTACAAT +>mm8 +GC---CAC----TCCT---------CTCCTTGGGA-TGAACTGCCTGCGGTTCTGGGTTGCACATACAAGAGCAACCAGCATGTTTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACT------CTTGTGAGCCCAGGGAGAGGTGGGGACAAGGTAGGAGCTTGCAAGCCTCCTGAACGCAGCGGCTAGAACCTCCATGCACACCTACCTAGGAACAAATCAAGTCAGACTCGTGGGATACACAT-GTGGCCCGAAAG-CTCCGGAAACCTTCTGCTGTGTTCTGGAGGCTTCCATCTGAGAGCAAGG-GGGAGGAGTGCACACTGCAGAGAGCAGCTCAGAAGAGGAAGCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTGTGTCACGTGCACATGATAGAGGACAGCCAAAGCCATTTTGCTAGTA-ATCTAGGGGCTTCGTGAGTAAAAAGACCCAAAAACTCCACT + +>hg18.chr10(+):94822723-94823222 +ccttcctcttataccgtctctttatcctgccaGGGCTAAGGACCCCCTTCCCTGCTGTCCAGCTGGGGCGCCAAGCAGCAGGGCCCTCCGAATAGGCGAGCTGTGCTTGGATCTCAGAGACGGGCACCGACTGCCGAGCCCCAGACGAAGTGCCCCAGGGTCGGGGATCAGGCTTGTGCAGGGTAGCACCTGGGGACCTGAGGGACCTGGAGGCCTTCTTGTATCCTGAAGTAGGACCTTCTAAGACTTCATGAGTCCTGGCCCCCTTGCAGGGGTTGGGGAGCTGGGGATCCCAGATCTGCCTATTGCGCCCGATGCCCCGAGGCTCTCTCTTGGACTCTGGCCCTGAGTTCTTCTGCGCGATCCTTCGGAGACGTCTGGAGGCCTGCTTTATGcatctctcttggacctcagtttccccacacgtgggaggaggcagctggacgattcctgaaaggactttccCTTGCTTCCTCATCACGTGGAAGAGAGCCCACCC +>mm8 +CTCCCTGTATTC-----CTCCCCATTCTGCCTGGACTGGGGGCCCTCTTCCCGGCCGCTTGGCTGAGGTTGCAAGCCCCAGGGCTATAGGAATGGGCCGGCTTGGCGGTATTACTACAGTGGAG-GTTGACTTTGGAGCCTCTGGTACCAGGGCTTAGAGAAGGGAGTCAGGCATGTGCAAGGCTGCACCTGGGGGCCC-AGAGACCTGGAGGCTTCTTTGAACTCGAAAGCAGGATTTTCCAAGTCTTCATGCGC-TGGCTCGCCTGTGGGGCCCTGGAAAGCTAGCG-TCCACGATCCGCCAGTCATACTTGACCTCCGAGACCG---GCTAGGACCCTCGCCCTGGGATCTTCTT-GGGATCCTCCAGA----TCAGGAAGCGT---------------TTGGAATCTCATTTACTCAACCGGTGGGTCAAGTCCATTGGATGATTCTTGAACGC----------GCTTTCCAAGCCAATGGAAAAGAGCCCACGA + +>hg18.chr10(+):94823138-94823637 +ttccccacacgtgggaggaggcagctggacgattcctgaaaggactttccCTTGCTTCCTCATCACGTGGAAGAGAGCCCACCCGGCACCTGGAAATGGAAAGCCAGTGAAGGCTGCTTTGGGCCGGGGCAGCGGGTGGGACCGGGCGGGAGGGATTCCAAAGAGACCGCCGGGAAGGCTAGAGCTTGGAATTCCGGCTCCTCGGAGTCCTGGCCCTCCCCCACCGCCGCCTCGGAGCTCAGCACACCTTGGATGGGGGAGGCGGGCAGCTCCTAGCCCCGCACCCCAGGAGGCGCGCTCGGAGGGAAGCCGCCACCGCGCCGCCTCTGCCTCGGCGCGGAACAAACGGTTAAAGATTTTGGGCAGCGCCTCGCGGGGGGAGGAGCCAGGGGCCCAATCCGCAATTAAAGATGAACTTTGGGTGAACTAATTGTCTGACCAAGGTAACGTGGGCAGCAACCTGGGCCGCCTATAAAGCGGCAGCGCCGTGGGGTTTGAA +>mm8 +TACTCAACCGGTGGGTCAAGTCCATTGGATGATTCTTGAACGC----------GCTTTCCAAGCCAATGGAAAAGAGCCCACGAGGCGCCTGTGAATGGTGAGCTGG----GAAGGCTTCGGGCTCGGGCAGCTGGTTCGACCCGGCTCGAGGGACAGCAGAGAGACAGCTAGGAAACCCAGGACTCCAAATTCCCACTTCTTGGAACCCCGACTCCCCCCCCCCGCCGCCTCGGAGCTCTGCACACCTAGGACAAGGAAAGAGGTG--TTCCTAGTCCCGCACCCCAGGAGGCGCGCTCAGAGGGAAGCCGCCAGTGCGCCGCCTCTGCCTCGGCGCGGAACAAACGGTTAAAGATTTTGGGCAGCGCCTCGAGGGGGGAGGAGCCAGGGGCCCGATCCGCAATTAAAGATGAACTTTGGGTGAACTAATTGTCTGACCAAGGTAACGTGGGCAGTAACCTGGGCGGCCTATAAAGAGGGCGCGCGGCGGGGTTCGGA + +>hg18.chr10(+):29005931-29006430 +CCGCCTCCCCCGGGCTCCCACCCGAACCCTCCTCCGCCACCTGCACAGGCCGGGGCATTGTCACTCGCCCCTGGGGGTTCCAGAAAACGCAGTGCGGCCGGGGAGGACGACCACACGGACCCCCTGCGTGTTTCGGGGGGCACCCAAAAGAAGCCCCGCGCTGGGGAACGCTGACCACCCGAGGCTGAGCCGTCAGGGTCTCGGAGGCGGGTTCCCGAGCCGGTCCCGGGGCTGGGCTCCCCCGGCGCCTCGCGAAGGTCACTGACGCGCAGGCCTCCGCAAGGGGGAGCGCGGGAGACGGCAGCGCACCAGCCGGGCGCCCCAGCCGGGCGCCCCAGACGCCGGCGCCGCTCGGAGCCGCCGGGCAGGTCCCCCAGCGCTCGCGTCTGGGCCCGCCCCCCGCTGCGGGGCGGATTGACAGGAGCCCGGCGGCCAATCGGACGCCGTggggcggggcgaggcggggcggtgcaggccggCTCCCGGCGCGGGGCGCTAT +>mm8 +CTGCCCCTTCTTGACTATCACCCTACTCCTCCTCGGCCA--CGCGCGGGCGGGCGTATTGTTACATGGCCCTGGTGGTTTCGGCAACCGAAGTATGGCCGAGGATGATGACTACTGAGATCCCTTGCAGGTTTCAGGTGGGACAAAAGCGAAGCCACGTGCTGGAGGCCGCTGACCA---GAGACTGAGCAGTGAGGGTCTCGTAGCAAA--CTCCGAACCTATCTAGAAGAGGGGCT-CTGCGACGCATAT--GAGGCTGT--TCGCGCAGGCGTTCGCTAGGGGGAGTGCT-----------------------GCGGCCGTGTCCACAGTGCTACTTGCCAGCGCCAGCGGGAGCCCGGCGGCTTGTCTGCCTTAGCCCGCGTCTGGCCCCGCCCCCTGCGGCTGGGCCCTGGGGCTAGAG-GCGTCCGCCAATCGGAGAGTG-GAGGCGGGGCAGGGCGGGGCCGCGCTGGCCCACTCTGGGCGCCGGGCGCTAT + diff -r 973d6cbeea87 -r 77f8bf51b2ae tools/maf/interval_maf_to_merged_fasta.py --- a/tools/maf/interval_maf_to_merged_fasta.py Thu Aug 21 16:49:16 2008 -0400 +++ b/tools/maf/interval_maf_to_merged_fasta.py Fri Aug 22 10:39:58 2008 -0400 @@ -33,17 +33,23 @@ assert sys.version_info[:2] >= ( 2, 4 ) +def stop_err( msg ): + sys.stderr.write( msg ) + sys.exit() + def __main__(): #Parse Command Line options, args = doc_optparse.parse( __doc__ ) mincols = 0 - - if options.dbkey: primary_species = options.dbkey - else: primary_species = None + strand_col = -1 + + if options.dbkey: + primary_species = options.dbkey + else: + primary_species = None if primary_species in [None, "?", "None"]: - print >>sys.stderr, "You must specify a proper build in order to extract alignments. You can specify your genome build by clicking on the pencil icon associated with your interval file." - sys.exit() + stop_err( "You must specify a proper build in order to extract alignments. You can specify your genome build by clicking on the pencil icon associated with your interval file." ) include_primary = True if options.species: @@ -52,43 +58,40 @@ secondary_species = None species = None else: - try: secondary_species.remove( primary_species ) - except: include_primary = False + try: + secondary_species.remove( primary_species ) + except: + include_primary = False species = [primary_species] + secondary_species - if options.interval_file: interval_file = options.interval_file + if options.interval_file: + interval_file = options.interval_file else: - print >>sys.stderr, "Input interval file has not been specified." - sys.exit() + stop_err( "Input interval file has not been specified." ) - if options.output_file: output_file = options.output_file + if options.output_file: + output_file = options.output_file else: - print >>sys.stderr, "Output file has not been specified." - sys.exit() + stop_err( "Output file has not been specified." ) if not options.geneBED: if options.chromCol: chr_col = int( options.chromCol ) - 1 else: - print >>sys.stderr, "Chromosome column not set, click the pencil icon in the history item to set the metadata attributes." - sys.exit() + stop_err( "Chromosome column not set, click the pencil icon in the history item to set the metadata attributes." ) if options.startCol: start_col = int( options.startCol ) - 1 else: - print >>sys.stderr, "Start column not set, click the pencil icon in the history item to set the metadata attributes." - sys.exit() + stop_err( "Start column not set, click the pencil icon in the history item to set the metadata attributes." ) if options.endCol: end_col = int( options.endCol ) - 1 else: - print >>sys.stderr, "End column not set, click the pencil icon in the history item to set the metadata attributes." - sys.exit() - + stop_err( "End column not set, click the pencil icon in the history item to set the metadata attributes." ) + if options.strandCol: strand_col = int( options.strandCol ) - 1 - else: - strandCol = -1 mafIndexFile = "%s/maf_index.loc" % options.mafIndexFileDir #Finish parsing command line @@ -99,21 +102,17 @@ if options.mafSourceType.lower() in ["cached"]: index = maf_utilities.maf_index_by_uid( options.mafSource, mafIndexFile ) if index is None: - print >> sys.stderr, "The MAF source specified (%s) appears to be invalid." % ( options.mafSource ) - sys.exit() + stop_err( "The MAF source specified (%s) appears to be invalid." % ( options.mafSource ) ) elif options.mafSourceType.lower() in ["user"]: #index maf for use here, need to remove index_file when finished index, index_filename = maf_utilities.build_maf_index( options.mafSource, species = [primary_species] ) if index is None: - print >> sys.stderr, "Your MAF file appears to be malformed." - sys.exit() + stop_err( "Your MAF file appears to be malformed." ) else: - print >> sys.stderr, "Invalid MAF source type specified." - sys.exit() + stop_err( "Invalid MAF source type specified." ) #open output file output = open( output_file, "w" ) - if options.geneBED: region_enumerator = maf_utilities.line_enumerator( open( interval_file, "r" ).readlines() ) diff -r 973d6cbeea87 -r 77f8bf51b2ae tools/maf/interval_maf_to_merged_fasta.xml --- a/tools/maf/interval_maf_to_merged_fasta.xml Thu Aug 21 16:49:16 2008 -0400 +++ b/tools/maf/interval_maf_to_merged_fasta.xml Fri Aug 22 10:39:58 2008 -0400 @@ -56,6 +56,13 @@ </outputs> <tests> <test> + <param name="input1" value="13.bed" dbkey="hg18" ftype="bed"/> + <param name="maf_source" value="cached"/> + <param name="maf_identifier" value="17_WAY_MULTIZ_hg18"/> + <param name="species" value="hg18,mm8"/> + <output name="out_file1" file="interval_maf_to_merged_fasta_out3.fasta" /> + </test> + <test> <param name="input1" value="1.bed" dbkey="hg17" ftype="bed"/> <param name="maf_source" value="cached"/> <param name="maf_identifier" value="8_WAY_MULTIZ_hg17"/>

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[hg] galaxy 1475: (no commit message)
by greg＠scofield.bx.psu.edu 22 Aug '08

22 Aug '08

details: http://www.bx.psu.edu/hg/galaxy/rev/973d6cbeea87 changeset: 1475:973d6cbeea87 user: Greg Von Kuster <greg(a)bx.psu.edu> date: Thu Aug 21 16:49:16 2008 -0400 description: (no commit message) 1 file(s) affected in this change: tools/extract/extract_genomic_dna.xml diffs (12 lines): diff -r cea8c4d68ad0 -r 973d6cbeea87 tools/extract/extract_genomic_dna.xml --- a/tools/extract/extract_genomic_dna.xml Thu Aug 21 08:54:51 2008 -0400 +++ b/tools/extract/extract_genomic_dna.xml Thu Aug 21 16:49:16 2008 -0400 @@ -4,7 +4,7 @@ <inputs> <param format="interval" name="input" type="data" label="Fetch sequences corresponding to Query"> <validator type="unspecified_build" /> - <validator type="dataset_metadata_in_file" filename="alignseq.loc" metadata_name="dbkey" metadata_column="1" message="Sequences are not currently available for the specified build." split=" " line_startswith="seq" /> + <validator type="dataset_metadata_in_file" filename="alignseq.loc" metadata_name="dbkey" metadata_column="1" message="Sequences are not currently available for the specified build." split="\t" line_startswith="seq" /> </param> <param name="out_format" type="select" label="Output data type"> <option value="fasta">FASTA</option>

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Main is at rev 1474:cea8c4d68ad0
by Greg Von Kuster 21 Aug '08

21 Aug '08

1 0

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