galaxy-commits

galaxy-commits@lists.galaxyproject.org
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  • 94 discussions
commit/galaxy-central: kanwei: trackster: Fix border and error not lining up at right place
by Bitbucket
11 years, 1 month
commit/galaxy-central: jgoecks: Add support for comment handling to gff_to_interval_index tool.
by Bitbucket
11 years, 1 month
commit/galaxy-central: jgoecks: Relax diff calculation for Cuffdiff test to account for non-deterministic output.
by Bitbucket
11 years, 1 month
commit/galaxy-central: kanwei: Show details: now works even when tool is obsolete. Show inheritance chain where the dataset came from if it was copied from a history or library
by Bitbucket
11 years, 1 month
commit/galaxy-central: kellyv: Updated SRMA to properly set dbkey and changed functional tests so that they can handle a single line difference for the SRMA version number tag
by Bitbucket
11 years, 1 month
commit/galaxy-central: dan: Some minor fixes for 5537:1a379a0f2ecc.
by Bitbucket
11 years, 1 month
commit/galaxy-central: dan: First pass at adding some GATK tools. Included tools are "Realigner Target Creator", "Indel Realigner", "Count Covariates", "Table Recalibration", "Analyze Covariates" and "Unified Genotyper". These tool integrations should be considered beta: changes that will not be backwards-compatible with workflows and re-run functionality should be expected.
by Bitbucket
11 years, 1 month
commit/galaxy-central: dan: Add a "contains" compare type to functional tests. Enables simple checking for substrings in a test output file, on a line-by-line basis. TODO: Enhance to enforce order.
by Bitbucket
11 years, 1 month
commit/galaxy-central: dan: Fix for expand grouping to allow toolbox tests to use the default parameter value.
by Bitbucket
11 years, 1 month
commit/galaxy-central: dan: Have MACS peak caller wrapper use return code to set error state.
by Bitbucket
11 years, 1 month
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