2 new commits in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/1d6063120517/
Changeset: 1d6063120517
User: dannon
Date: 2015-02-17 14:26:53+00:00
Summary: Update requirements.txt for SQLAlchemy 0.9.8 (tip)
Affected #: 1 file
diff -r 1374a75dfeb17af8913e4fffa8b6f11bdf6f668e -r 1d60631205172f867df03cb37eb0cb45cb2811fc requirements.txt
--- a/requirements.txt
+++ b/requirements.txt
@@ -14,14 +14,14 @@
# starting a Galaxy server. Use this in conjunction with the
# `GALAXY_ENABLE_EGGS=False` environment variable.
#
-# Note that except in the case of SQLAlchemy and Whoosh, all dependencies will
-# be installed at their newest versions. Galaxy has not been tested with these
-# and you may (likely?) run into problems! The Galaxy Team does not support
-# using Galaxy with dependency versions other than those in eggs.ini, however,
-# if you do find an incompatibility between Galaxy and the latest version, we
-# would appreciate if you would investigate and provide a code fix for the
-# issue. We are trying to move away from our strict version dependency policy
-# and this would greatly help in our efforts.
+# Note that except in the case of Whoosh, all dependencies will be installed at
+# their newest versions. Galaxy has not been tested with these and you may
+# (likely?) run into problems! The Galaxy Team does not support using Galaxy
+# with dependency versions other than those in eggs.ini, however, if you do
+# find an incompatibility between Galaxy and the latest version, we would
+# appreciate if you would investigate and provide a code fix for the issue. We
+# are trying to move away from our strict version dependency policy and this
+# would greatly help in our efforts.
Paste
PasteDeploy
@@ -32,7 +32,7 @@
repoze.lru
Routes
WebOb
-SQLAlchemy<0.8
+SQLAlchemy
Cheetah
pycrypto
MarkupSafe
https://bitbucket.org/galaxy/galaxy-central/commits/2e3855e25b9b/
Changeset: 2e3855e25b9b
User: dannon
Date: 2015-02-17 14:27:27+00:00
Summary: Merge.
Affected #: 0 files
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/963441341870/
Changeset: 963441341870
User: natefoo
Date: 2015-02-17 14:23:34+00:00
Summary: Allow latest SQLAlchemy in requirements.txt
Affected #: 1 file
diff -r 1374a75dfeb17af8913e4fffa8b6f11bdf6f668e -r 963441341870819e393a8958b8da7633b4eecb28 requirements.txt
--- a/requirements.txt
+++ b/requirements.txt
@@ -14,14 +14,14 @@
# starting a Galaxy server. Use this in conjunction with the
# `GALAXY_ENABLE_EGGS=False` environment variable.
#
-# Note that except in the case of SQLAlchemy and Whoosh, all dependencies will
-# be installed at their newest versions. Galaxy has not been tested with these
-# and you may (likely?) run into problems! The Galaxy Team does not support
-# using Galaxy with dependency versions other than those in eggs.ini, however,
-# if you do find an incompatibility between Galaxy and the latest version, we
-# would appreciate if you would investigate and provide a code fix for the
-# issue. We are trying to move away from our strict version dependency policy
-# and this would greatly help in our efforts.
+# Note that except in the case of Whoosh, all dependencies will be installed at
+# their newest versions. Galaxy has not been tested with these and you may
+# (likely?) run into problems! The Galaxy Team does not support using Galaxy
+# with dependency versions other than those in eggs.ini, however, if you do
+# find an incompatibility between Galaxy and the latest version, we would
+# appreciate if you would investigate and provide a code fix for the issue. We
+# are trying to move away from our strict version dependency policy and this
+# would greatly help in our efforts.
Paste
PasteDeploy
@@ -32,7 +32,7 @@
repoze.lru
Routes
WebOb
-SQLAlchemy<0.8
+SQLAlchemy
Cheetah
pycrypto
MarkupSafe
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/02ddea42faad/
Changeset: 02ddea42faad
Branch: stable
User: natefoo
Date: 2015-02-17 14:00:22+00:00
Summary: Update tag latest_2015.01.13 for changeset d677cb314dcc
Affected #: 1 file
diff -r d677cb314dccedd8743eba26f1d446cdf97ebf16 -r 02ddea42faade21f5a76602d1e4035aa02a0151e .hgtags
--- a/.hgtags
+++ b/.hgtags
@@ -22,4 +22,4 @@
2092948937ac30ef82f71463a235c66d34987088 release_2014.10.06
782fa60fc65488aea0c618d723e9a63d42caf865 latest_2014.10.06
2e8dd2949dd3eee0f56f9a3a5ebf1b2baca24aee release_2015.01.13
-a6e9a1d7267410f697f30102ed78317b08274026 latest_2015.01.13
+d677cb314dccedd8743eba26f1d446cdf97ebf16 latest_2015.01.13
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/1fb4f358624f/
Changeset: 1fb4f358624f
User: guerler
Date: 2015-02-16 22:26:09+00:00
Summary: Parameters: Fix late validation criteria
Affected #: 1 file
diff -r 0155ac3c87edc23a2edefa54aca7a7d694fb9f33 -r 1fb4f358624fbc34472c63991db8a93d690f37af lib/galaxy/tools/parameters/basic.py
--- a/lib/galaxy/tools/parameters/basic.py
+++ b/lib/galaxy/tools/parameters/basic.py
@@ -965,7 +965,7 @@
# Old style dynamic options, no dependency information so there isn't
# a lot we can do: if we're dealing with workflows, have to assume
# late validation no matter what.
- if (self.dynamic_options is not None or self.is_dynamic is not None) and ( trans is None or trans.workflow_building_mode ):
+ if self.dynamic_options is not None and ( trans is None or trans.workflow_building_mode ):
return True
# If we got this far, we can actually look at the dependencies
# to see if their values will not be available until runtime.
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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