Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: bf5568d86ae2e111ab90b9658192ee70faf11fc7
https://github.com/galaxyproject/galaxy/commit/bf5568d86ae2e111ab90b9658192…
Author: Nicola Soranzo <nicola.soranzo(a)tgac.ac.uk>
Date: 2016-04-25 (Mon, 25 Apr 2016)
Changed paths:
M tools/filters/trimmer.xml
Log Message:
-----------
Quote some parameters in Trim tool command
Make the tool more robust, see issue #2245.
Also:
- use format_source instead of deprecated format='input';
- explicitly call python in command instead of using the depredated interpreter attribute;
- use CDATA in command.
Commit: e2287e2c9dd6cf394dbb30b1e77123a25a29d8f5
https://github.com/galaxyproject/galaxy/commit/e2287e2c9dd6cf394dbb30b1e771…
Author: Dannon Baker <dannon.baker(a)gmail.com>
Date: 2016-04-27 (Wed, 27 Apr 2016)
Changed paths:
M tools/filters/trimmer.xml
Log Message:
-----------
Merge pull request #2248 from nsoranzo/fix_trimmer_tool
Quote some parameters in Trim tool command
Compare: https://github.com/galaxyproject/galaxy/compare/d7031d982219...e2287e2c9dd6
Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 7718ac511b87078c48a2c6d1f396990e6dbb7f1a
https://github.com/galaxyproject/galaxy/commit/7718ac511b87078c48a2c6d1f396…
Author: guerler <aysam.guerler(a)gmail.com>
Date: 2016-04-25 (Mon, 25 Apr 2016)
Changed paths:
M client/galaxy/scripts/mvc/form/form-parameters.js
M client/galaxy/scripts/mvc/tool/tool-form-composite.js
M client/galaxy/scripts/mvc/ui/ui-list.js
M client/galaxy/scripts/mvc/ui/ui-options.js
M client/galaxy/scripts/mvc/ui/ui-select-default.js
M client/galaxy/scripts/utils/utils.js
M static/maps/mvc/form/form-parameters.js.map
M static/maps/mvc/tool/tool-form-composite.js.map
M static/maps/mvc/ui/ui-list.js.map
M static/maps/mvc/ui/ui-options.js.map
M static/maps/mvc/ui/ui-select-default.js.map
M static/maps/utils/utils.js.map
M static/scripts/bundled/analysis.bundled.js
M static/scripts/bundled/analysis.bundled.js.map
M static/scripts/bundled/libs.bundled.js
M static/scripts/bundled/libs.bundled.js.map
M static/scripts/mvc/form/form-parameters.js
M static/scripts/mvc/tool/tool-form-composite.js
M static/scripts/mvc/ui/ui-list.js
M static/scripts/mvc/ui/ui-options.js
M static/scripts/mvc/ui/ui-select-default.js
M static/scripts/utils/utils.js
Log Message:
-----------
Rename Utils.validate() to Utils.isEmpty()
Commit: faa2e69ec72e51b10e8a8d96a3a92b2868192c6e
https://github.com/galaxyproject/galaxy/commit/faa2e69ec72e51b10e8a8d96a3a9…
Author: guerler <aysam.guerler(a)gmail.com>
Date: 2016-04-25 (Mon, 25 Apr 2016)
Changed paths:
A test/qunit/tests/utils_test.html
A test/qunit/tests/utils_test.js
Log Message:
-----------
Add test cases
Commit: d7031d982219c1530a83d645cf897dc609fb6431
https://github.com/galaxyproject/galaxy/commit/d7031d982219c1530a83d645cf89…
Author: Dannon Baker <dannon.baker(a)gmail.com>
Date: 2016-04-27 (Wed, 27 Apr 2016)
Changed paths:
M client/galaxy/scripts/mvc/form/form-parameters.js
M client/galaxy/scripts/mvc/tool/tool-form-composite.js
M client/galaxy/scripts/mvc/ui/ui-list.js
M client/galaxy/scripts/mvc/ui/ui-options.js
M client/galaxy/scripts/mvc/ui/ui-select-default.js
M client/galaxy/scripts/utils/utils.js
M static/maps/mvc/form/form-parameters.js.map
M static/maps/mvc/tool/tool-form-composite.js.map
M static/maps/mvc/ui/ui-list.js.map
M static/maps/mvc/ui/ui-options.js.map
M static/maps/mvc/ui/ui-select-default.js.map
M static/maps/utils/utils.js.map
M static/scripts/bundled/analysis.bundled.js
M static/scripts/bundled/analysis.bundled.js.map
M static/scripts/bundled/libs.bundled.js
M static/scripts/bundled/libs.bundled.js.map
M static/scripts/mvc/form/form-parameters.js
M static/scripts/mvc/tool/tool-form-composite.js
M static/scripts/mvc/ui/ui-list.js
M static/scripts/mvc/ui/ui-options.js
M static/scripts/mvc/ui/ui-select-default.js
M static/scripts/utils/utils.js
A test/qunit/tests/utils_test.html
A test/qunit/tests/utils_test.js
Log Message:
-----------
Merge pull request #2239 from guerler/rename_jsvalidate_000
Rename/refactor Utils.validate() to Utils.isEmpty()
Compare: https://github.com/galaxyproject/galaxy/compare/01472fdc0188...d7031d982219
Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: c2b091d207197759e9693b6d5bf3581a678043ee
https://github.com/galaxyproject/galaxy/commit/c2b091d207197759e9693b6d5bf3…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2016-04-22 (Fri, 22 Apr 2016)
Changed paths:
M test/api/test_tools.py
A test/functional/tools/multi_data_repeat.xml
M test/functional/tools/samples_tool_conf.xml
Log Message:
-----------
Tests demonstrating multi-data params in repeats are broken.
A test cases and a tool that can be tested directory.
Commit: 18a6393010d17d0477ecafeb98c29595f0b9ec34
https://github.com/galaxyproject/galaxy/commit/18a6393010d17d0477ecafeb98c2…
Author: Aysam Guerler <aysam.guerler(a)gmail.com>
Date: 2016-04-23 (Sat, 23 Apr 2016)
Changed paths:
M test/api/test_tools.py
A test/functional/tools/multi_data_repeat.xml
M test/functional/tools/samples_tool_conf.xml
Log Message:
-----------
Merge pull request #2233 from jmchilton/repeat_multidata
[16.04] Multi-data collection reductions in repeat blocks are broken.
Compare: https://github.com/galaxyproject/galaxy/compare/581e5ccdcb21...18a6393010d1