April 2018 - galaxy-commits - lists.galaxyproject.org

[galaxyproject/usegalaxy-playbook] d0c7c3: add warning about bs4 to test
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: d0c7c3e2bd9100546b7ba29208d6336de6a9e39d https://github.com/galaxyproject/usegalaxy-playbook/commit/d0c7c3e2bd910054… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/test/group_vars/galaxyservers/vars.yml Log Message: ----------- add warning about bs4 to test

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[galaxyproject/usegalaxy-playbook] 1ce855: update Test to run bs4 branch
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 1ce855a89a24b639157a56718eb40145c3635bc4 https://github.com/galaxyproject/usegalaxy-playbook/commit/1ce855a89a24b639… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/test/files/galaxy/galaxy_version.yml M env/test/group_vars/all.yml Log Message: ----------- update Test to run bs4 branch

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[galaxyproject/usegalaxy-playbook] ccd628: Handle column ordering compatible with both bs3, b...
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: ccd62883445dffa84c8a1d7f2c60f92bddd4ec1b https://github.com/galaxyproject/usegalaxy-playbook/commit/ccd62883445dffa8… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/templates/galaxy/static/welcome.html.j2 Log Message: ----------- Handle column ordering compatible with both bs3, bs4

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[galaxyproject/usegalaxy-playbook] 513a35: Update PSU logo, reduce size of OHSU logo.
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 513a352bfe5940cc725d0e112e14252ba43df2fa https://github.com/galaxyproject/usegalaxy-playbook/commit/513a352bfe5940cc… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/files/galaxy/static/welcome_img/ohsu_logo.png M env/common/files/galaxy/static/welcome_img/psu_logo.png Log Message: ----------- Update PSU logo, reduce size of OHSU logo.

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[galaxyproject/usegalaxy-playbook] 169ef8: Swap col-xs-N to col-sm-N for bootstrap4 changes. ...
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 169ef847fb90bf78a2c067358c1981d1db0a2a96 https://github.com/galaxyproject/usegalaxy-playbook/commit/169ef847fb90bf78… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/templates/galaxy/static/welcome.html.j2 Log Message: ----------- Swap col-xs-N to col-sm-N for bootstrap4 changes. Safe to deploy against bs3 as well. Commit: c56cae93d9901f2bfe79c3d86053edf96eed38b6 https://github.com/galaxyproject/usegalaxy-playbook/commit/c56cae93d9901f2b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/templates/galaxy/static/welcome.html.j2 Log Message: ----------- Swap hidden to d-* utilities for bs4 (this one will not work without bs4) Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/7590c6f3a09e...…

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[galaxyproject/usegalaxy-playbook] c56cae: Swap hidden to d-* utilities for bs4 (this one wil...
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/bs4_welcome_tweaks Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: c56cae93d9901f2bfe79c3d86053edf96eed38b6 https://github.com/galaxyproject/usegalaxy-playbook/commit/c56cae93d9901f2b… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/templates/galaxy/static/welcome.html.j2 Log Message: ----------- Swap hidden to d-* utilities for bs4 (this one will not work without bs4)

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[galaxyproject/usegalaxy-playbook] 169ef8: Swap col-xs-N to col-sm-N for bootstrap4 changes. ...
by GitHub 05 Apr '18

05 Apr '18

Branch: refs/heads/bs4_welcome_tweaks Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 169ef847fb90bf78a2c067358c1981d1db0a2a96 https://github.com/galaxyproject/usegalaxy-playbook/commit/169ef847fb90bf78… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-05 (Thu, 05 Apr 2018) Changed paths: M env/common/templates/galaxy/static/welcome.html.j2 Log Message: ----------- Swap col-xs-N to col-sm-N for bootstrap4 changes. Safe to deploy against bs3 as well.

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[galaxyproject/usegalaxy-playbook] 7590c6: Updated mothur suite to version 1.39.5
by GitHub 04 Apr '18

04 Apr '18

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 7590c6f3a09e22dbbc8862e14aaeac1c5852f951 https://github.com/galaxyproject/usegalaxy-playbook/commit/7590c6f3a09e22db… Author: Dave B <dave(a)bx.psu.edu> Date: 2018-04-04 (Wed, 04 Apr 2018) Changed paths: M env/main/files/galaxy/var/integrated_tool_panel.xml M env/main/files/galaxy/var/shed_tool_conf.xml M env/main/files/galaxy/var/shed_tool_data_table_conf.xml Log Message: ----------- Updated mothur suite to version 1.39.5

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[galaxyproject/galaxy] 506de0: Skip new script tests in dev branch, they are brea...
by GitHub 04 Apr '18

04 Apr '18

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 506de02ec462d217220a531a8e40c0e02dbedcd7 https://github.com/galaxyproject/galaxy/commit/506de02ec462d217220a531a8e40… Author: John Chilton <jmchilton(a)gmail.com> Date: 2018-04-04 (Wed, 04 Apr 2018) Changed paths: M test/integration/test_scripts.py Log Message: ----------- Skip new script tests in dev branch, they are breaking integration suite. Commit: 1da06ba2b34a59ab6ea2dd4f1bd765142b423d63 https://github.com/galaxyproject/galaxy/commit/1da06ba2b34a59ab6ea2dd4f1bd7… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2018-04-04 (Wed, 04 Apr 2018) Changed paths: M test/integration/test_scripts.py Log Message: ----------- Merge pull request #5839 from jmchilton/integration_test_fixes Skip new script tests in dev branch, they are breaking integration suite. Compare: https://github.com/galaxyproject/galaxy/compare/fbd5541e4edd...1da06ba2b34a

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[galaxyproject/galaxy] 0043f2: Remove unused template file.
by GitHub 04 Apr '18

04 Apr '18

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 0043f2f3a0044e359522f2fe6e485469b008f330 https://github.com/galaxyproject/galaxy/commit/0043f2f3a0044e359522f2fe6e48… Author: John Chilton <jmchilton(a)gmail.com> Date: 2018-04-03 (Tue, 03 Apr 2018) Changed paths: R templates/admin/view_data_tables_registry.mako Log Message: ----------- Remove unused template file. Commit: 4e4dbc88233d5309dfd5cc9b0923cc0e0d178ac7 https://github.com/galaxyproject/galaxy/commit/4e4dbc88233d5309dfd5cc9b0923… Author: John Chilton <jmchilton(a)gmail.com> Date: 2018-04-03 (Tue, 03 Apr 2018) Changed paths: M client/galaxy/scripts/apps/panels/admin-panel.js M client/galaxy/scripts/components/admin/DataTablesGrid.vue M client/galaxy/scripts/legacy/grid/grid-view.js M client/galaxy/scripts/mvc/form/form-view.js M client/galaxy/scripts/mvc/form/form-wrapper.js M client/galaxy/scripts/mvc/grid/grid-model.js M client/galaxy/scripts/mvc/grid/grid-template.js M client/galaxy/scripts/mvc/ui/ui-portlet.js M lib/galaxy/web/framework/helpers/grids.py M lib/galaxy/webapps/galaxy/controllers/admin.py M templates/admin/view_datatypes_registry.mako M templates/webapps/galaxy/admin/view_display_applications.mako M templates/webapps/galaxy/data_manager/index.mako M test/galaxy_selenium/navigates_galaxy.py M test/galaxy_selenium/navigation.yml A test/selenium_tests/test_admin_app.py Log Message: ----------- Expand selenium test coverage. Initial admin app tests including screenshots of display applications, data tables, data types, and job management. Commit: fbd5541e4edd57870da924a2de11c2675b1d7bc4 https://github.com/galaxyproject/galaxy/commit/fbd5541e4edd57870da924a2de11… Author: Dannon Baker <dannon.baker(a)gmail.com> Date: 2018-04-04 (Wed, 04 Apr 2018) Changed paths: M client/galaxy/scripts/apps/panels/admin-panel.js M client/galaxy/scripts/components/admin/DataTablesGrid.vue M client/galaxy/scripts/legacy/grid/grid-view.js M client/galaxy/scripts/mvc/form/form-view.js M client/galaxy/scripts/mvc/form/form-wrapper.js M client/galaxy/scripts/mvc/grid/grid-model.js M client/galaxy/scripts/mvc/grid/grid-template.js M client/galaxy/scripts/mvc/ui/ui-portlet.js M lib/galaxy/web/framework/helpers/grids.py M lib/galaxy/webapps/galaxy/controllers/admin.py R templates/admin/view_data_tables_registry.mako M templates/admin/view_datatypes_registry.mako M templates/webapps/galaxy/admin/view_display_applications.mako M templates/webapps/galaxy/data_manager/index.mako M test/galaxy_selenium/navigates_galaxy.py M test/galaxy_selenium/navigation.yml A test/selenium_tests/test_admin_app.py Log Message: ----------- Merge pull request #5836 from jmchilton/selenium_admin_init Initial Selenium Test Coverage for Admin App Compare: https://github.com/galaxyproject/galaxy/compare/c9881fdc5ca7...fbd5541e4edd

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