- galaxy-commits - lists.galaxyproject.org

[galaxyproject/galaxy] 6b25b4: Remove unused export base mako
by GitHub 20 Sep '17

20 Sep '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 6b25b44394f3626ddc22356d2105eb259e88a303 https://github.com/galaxyproject/galaxy/commit/6b25b44394f3626ddc22356d2105… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-20 (Wed, 20 Sep 2017) Changed paths: R templates/export_base.mako Log Message: ----------- Remove unused export base mako Commit: a25a76ab6a7f2919c277674b89543075aa93eecc https://github.com/galaxyproject/galaxy/commit/a25a76ab6a7f2919c277674b8954… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-20 (Wed, 20 Sep 2017) Changed paths: R templates/export_base.mako Log Message: ----------- Merge pull request #4661 from guerler/remove_export_base Remove unused export base mako Compare: https://github.com/galaxyproject/galaxy/compare/907228928f02...a25a76ab6a7f

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[galaxyproject/usegalaxy-playbook] d004b3: update Test
by GitHub 20 Sep '17

20 Sep '17

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: d004b3540989fc6e3b196bdbfc9ef483e4475a75 https://github.com/galaxyproject/usegalaxy-playbook/commit/d004b3540989fc6e… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-20 (Wed, 20 Sep 2017) Changed paths: M common_roles M env/test/files/galaxy/galaxy_version.yml A stage/files/interactive_environments/plugins/ethercalc/config/allowed_images.yml.sample Log Message: ----------- update Test

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[galaxyproject/galaxy] ee6b8b: pin the last flake8
by GitHub 20 Sep '17

20 Sep '17

Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy Commit: ee6b8b1af8c997d874a9ad7213231582b69cf82c https://github.com/galaxyproject/galaxy/commit/ee6b8b1af8c997d874a9ad721323… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M tox.ini Log Message: ----------- pin the last flake8 thanks @nsoranzo :eagle: :eyes: Commit: 0e89935460a54fa846dff53041fcfe3b8e7e9ecd https://github.com/galaxyproject/galaxy/commit/0e89935460a54fa846dff53041fc… Author: Nicola Soranzo <nsoranzo(a)tiscali.it> Date: 2017-09-20 (Wed, 20 Sep 2017) Changed paths: M tox.ini Log Message: ----------- Merge pull request #4652 from martenson/release_17.09 [17.09] pin the last missing flake8 Compare: https://github.com/galaxyproject/galaxy/compare/f46a5c1797fb...0e89935460a5

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[galaxyproject/galaxy] 7fd681: pin flake8 deps for release
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy Commit: 7fd6813dd7fcf373cc09a3da6fd6f4bf5c8b0863 https://github.com/galaxyproject/galaxy/commit/7fd6813dd7fcf373cc09a3da6fd6… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M tox.ini Log Message: ----------- pin flake8 deps for release Commit: f46a5c1797fb4c1f3fc663addf83ce9a411beac6 https://github.com/galaxyproject/galaxy/commit/f46a5c1797fb4c1f3fc663addf83… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M tox.ini Log Message: ----------- Merge pull request #4650 from martenson/release_17.09 [17.09] pin flake8 deps for release Compare: https://github.com/galaxyproject/galaxy/compare/a25b6e5b0eb5...f46a5c1797fb

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[galaxyproject/galaxy] eee4a1: Update version to 17.09.rc1
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: eee4a17a4cb45b6d79e610c00cbdf37df0988993 https://github.com/galaxyproject/galaxy/commit/eee4a17a4cb45b6d79e610c00cbd… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/version.py Log Message: ----------- Update version to 17.09.rc1 Commit: b7694ef656613400694183eb9e72f16ef2a207fe https://github.com/galaxyproject/galaxy/commit/b7694ef656613400694183eb9e72… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/version.py Log Message: ----------- Update version to 18.01.dev Commit: 6ea93b19e5a6f86b08c7459337288ac9862537ff https://github.com/galaxyproject/galaxy/commit/6ea93b19e5a6f86b08c745933728… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Log Message: ----------- Merge branch 'version-17.09' into version-18.01.dev Commit: 907228928f02d12bead54a883bd8cc50ebbeb386 https://github.com/galaxyproject/galaxy/commit/907228928f02d12bead54a883bd8… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/version.py Log Message: ----------- Merge pull request #4649 from martenson/version-18.01.dev Update version to 18.01.dev Compare: https://github.com/galaxyproject/galaxy/compare/f15405877601...907228928f02

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[galaxyproject/galaxy] eee4a1: Update version to 17.09.rc1
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy Commit: eee4a17a4cb45b6d79e610c00cbdf37df0988993 https://github.com/galaxyproject/galaxy/commit/eee4a17a4cb45b6d79e610c00cbd… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/version.py Log Message: ----------- Update version to 17.09.rc1 Commit: a25b6e5b0eb5ed97e789e1b4b8643be775a55e05 https://github.com/galaxyproject/galaxy/commit/a25b6e5b0eb5ed97e789e1b4b864… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/version.py Log Message: ----------- Merge pull request #4648 from martenson/version-17.09 [17.09]Update version to 17.09.rc1 Compare: https://github.com/galaxyproject/galaxy/compare/f15405877601...a25b6e5b0eb5

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[galaxyproject/galaxy]
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy

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[galaxyproject/galaxy] 0df4db: Replace spaces with newlines in multi url upload r...
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 0df4db5175bec7653aaa855a5d873b3e6de14fcb https://github.com/galaxyproject/galaxy/commit/0df4db5175bec7653aaa855a5d87… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M lib/galaxy/tools/parameters/grouping.py Log Message: ----------- Replace spaces with newlines in multi url upload requests Commit: 2bcd46c7234aba06a871b6a824e49f5e39057239 https://github.com/galaxyproject/galaxy/commit/2bcd46c7234aba06a871b6a824e4… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M lib/galaxy/tools/parameters/grouping.py Log Message: ----------- Split by space instead of newline Commit: 6af7661fb181a90b31f50e055ac99b9113d1b287 https://github.com/galaxyproject/galaxy/commit/6af7661fb181a90b31f50e055ac9… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M lib/galaxy/tools/parameters/grouping.py Log Message: ----------- Drop manual string replacements, rely on split without parameters Commit: 8b517e7a036f0df3666e6d89f1aa0e885835225c https://github.com/galaxyproject/galaxy/commit/8b517e7a036f0df3666e6d89f1aa… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M lib/galaxy/tools/parameters/grouping.py Log Message: ----------- Restore previous behavior Commit: 403cd3ffca23fc91c6f8976e1734fcf96af26a78 https://github.com/galaxyproject/galaxy/commit/403cd3ffca23fc91c6f8976e1734… Author: guerler <aysam.guerler(a)gmail.com> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M client/galaxy/style/less/upload.less M static/style/blue/base.css Log Message: ----------- Remove line wrap Commit: f1540587760184b0f622c94802d0c8f84b885833 https://github.com/galaxyproject/galaxy/commit/f1540587760184b0f622c94802d0… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M client/galaxy/style/less/upload.less M static/style/blue/base.css Log Message: ----------- Merge pull request #4639 from guerler/replace_spaces_url do not wrap lines in the upload url fetch Compare: https://github.com/galaxyproject/galaxy/compare/7d394f202d84...f15405877601

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[galaxyproject/galaxy] 8a4c63: optimize the process of identifying public librari...
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 8a4c63738897a7324e31683076f4e77253ef3408 https://github.com/galaxyproject/galaxy/commit/8a4c63738897a7324e31683076f4… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-18 (Mon, 18 Sep 2017) Changed paths: M lib/galaxy/managers/libraries.py M lib/galaxy/webapps/galaxy/api/libraries.py Log Message: ----------- optimize the process of identifying public libraries this aims to speed up the library loading considerably Commit: c5d29be0a2c2c2d16be13d0fa528ad01e5022e1d https://github.com/galaxyproject/galaxy/commit/c5d29be0a2c2c2d16be13d0fa528… Author: Martin Cech <marten(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/managers/libraries.py Log Message: ----------- avoid mutable default, improve docs switch to set comprehension Commit: 7d394f202d84200e9b4a3c63ce42bf7baf53ccc8 https://github.com/galaxyproject/galaxy/commit/7d394f202d84200e9b4a3c63ce42… Author: John Chilton <jmchilton(a)gmail.com> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M lib/galaxy/managers/libraries.py M lib/galaxy/webapps/galaxy/api/libraries.py Log Message: ----------- Merge pull request #4640 from martenson/datalibs-optimize-access-checks optimize the process of identifying public libraries Compare: https://github.com/galaxyproject/galaxy/compare/3f51e7dc1ef9...7d394f202d84

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[galaxyproject/usegalaxy-playbook] 0ae5e1: Remove warning banner
by GitHub 19 Sep '17

19 Sep '17

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 0ae5e1d1b5074af07d6be10a86b871e275f6fb01 https://github.com/galaxyproject/usegalaxy-playbook/commit/0ae5e1d1b5074af0… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2017-09-19 (Tue, 19 Sep 2017) Changed paths: M env/main/group_vars/galaxyservers/vars.yml Log Message: ----------- Remove warning banner

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