Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 126ee5fe2bb6d8c1c2874545cd5a583389d45bca
https://github.com/galaxyproject/galaxy/commit/126ee5fe2bb6d8c1c2874545cd5a…
Author: mvdbeek <m.vandenbeek(a)gmail.com>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M lib/galaxy/datatypes/data.py
Log Message:
-----------
Create composite file archives in new_file_path instead of TMP
Commit: d19effdf3c042538ffa0ba1351a2f3433ad19fd1
https://github.com/galaxyproject/galaxy/commit/d19effdf3c042538ffa0ba1351a2…
Author: Dannon Baker <dannon.baker(a)gmail.com>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M doc/source/releases/18.09.rst
Log Message:
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One last batch of PRs.
Commit: 89fbe9c9344d1e8ad88fe88a0685cf85aa1edcb3
https://github.com/galaxyproject/galaxy/commit/89fbe9c9344d1e8ad88fe88a0685…
Author: Nicola Soranzo <nicola.soranzo(a)gmail.com>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M doc/source/releases/18.09.rst
Log Message:
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Merge pull request #6890 from dannon/18.09_release_notes_updates
[18.09] One last batch of PRs added to RN
Commit: 9735146f2848beca367ac84c066d10a4b5008a25
https://github.com/galaxyproject/galaxy/commit/9735146f2848beca367ac84c066d…
Author: Martin Cech <marten(a)bx.psu.edu>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M doc/source/releases/18.09_announce.rst
Log Message:
-----------
add discovered tool vulnerabilities to RN
Commit: fa212c3c31b78f885b7aff2681430bc9e54fec89
https://github.com/galaxyproject/galaxy/commit/fa212c3c31b78f885b7aff268143…
Author: Martin Cech <marten(a)bx.psu.edu>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M doc/source/releases/18.09_announce.rst
Log Message:
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specify which gemini tools were fixed
Commit: 0aca12ce96f0c2a860453a15022bbd5e693493ed
https://github.com/galaxyproject/galaxy/commit/0aca12ce96f0c2a860453a15022b…
Author: Dannon <dannon.baker(a)gmail.com>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M doc/source/releases/18.09_announce.rst
Log Message:
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Merge pull request #6892 from martenson/security-notes
[18.09] add discovered tool vulnerabilities to RN
Commit: 46e56417dddfa88c9b093c612eb006c9f471579d
https://github.com/galaxyproject/galaxy/commit/46e56417dddfa88c9b093c612eb0…
Author: guerler <aysam.guerler(a)gmail.com>
Date: 2018-10-17 (Wed, 17 Oct 2018)
Changed paths:
M lib/galaxy/web/base/controller.py
Log Message:
-----------
Use hasattr instead of relying on value
Commit: 3411852fedf31c93ec506aa4f8f8a922d4b57ad7
https://github.com/galaxyproject/galaxy/commit/3411852fedf31c93ec506aa4f8f8…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-10-21 (Sun, 21 Oct 2018)
Changed paths:
M lib/galaxy/datatypes/data.py
Log Message:
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Merge pull request #6885 from mvdbeek/create_in_new_file_path
[18.05] Create composite file archives in new_file_path instead of TMP
Commit: 88b840d2c6cc18184c71772d96301a9f9a71cbdc
https://github.com/galaxyproject/galaxy/commit/88b840d2c6cc18184c71772d9630…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-10-22 (Mon, 22 Oct 2018)
Changed paths:
M lib/galaxy/web/base/controller.py
Log Message:
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Merge pull request #6893 from martenson/backport-6884
[18.09] check presence of attribute in addition to value
Commit: 4dd2ecb13f1cac23730debd107dd150e46c47568
https://github.com/galaxyproject/galaxy/commit/4dd2ecb13f1cac23730debd107dd…
Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk>
Date: 2018-10-23 (Tue, 23 Oct 2018)
Changed paths:
M config/galaxy.yml.sample
M doc/source/admin/galaxy_options.rst
M lib/galaxy/webapps/galaxy/config_schema.yml
Log Message:
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Fix ``make config-validate``
Commit: 194358703450ff8fef553d92531fc6e6a0938612
https://github.com/galaxyproject/galaxy/commit/194358703450ff8fef553d92531f…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-10-23 (Tue, 23 Oct 2018)
Changed paths:
M config/galaxy.yml.sample
M doc/source/admin/galaxy_options.rst
M lib/galaxy/webapps/galaxy/config_schema.yml
Log Message:
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Merge pull request #6908 from nsoranzo/release_18.09_config_validate
[18.09] Fix ``make config-validate``
Commit: ecb56d80a103dc3b11091beb3de06a086ed48953
https://github.com/galaxyproject/galaxy/commit/ecb56d80a103dc3b11091beb3de0…
Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk>
Date: 2018-10-23 (Tue, 23 Oct 2018)
Changed paths:
M lib/galaxy/datatypes/data.py
Log Message:
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Merge branch 'release_18.05' into release_18.09
Commit: 02c71e2429bad6caf07ce9a66e788d26af8b21b3
https://github.com/galaxyproject/galaxy/commit/02c71e2429bad6caf07ce9a66e78…
Author: Nicola Soranzo <nicola.soranzo(a)earlham.ac.uk>
Date: 2018-10-23 (Tue, 23 Oct 2018)
Changed paths:
M config/galaxy.yml.sample
M doc/source/admin/galaxy_options.rst
M doc/source/releases/18.09.rst
M doc/source/releases/18.09_announce.rst
M lib/galaxy/datatypes/data.py
M lib/galaxy/webapps/galaxy/config_schema.yml
Log Message:
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Merge branch 'release_18.09' into dev
Compare: https://github.com/galaxyproject/galaxy/compare/3759db3297b2...02c71e2429ba
**NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/
Functionality will be removed from GitHub.com on January 31st, 2019.
Branch: refs/heads/master
Home: https://github.com/galaxyproject/usegalaxy-playbook
Commit: aa23d8cf0d1d857421b02c98bf278ea0d9923ba7
https://github.com/galaxyproject/usegalaxy-playbook/commit/aa23d8cf0d1d8574…
Author: Nate Coraor <nate(a)bx.psu.edu>
Date: 2018-10-22 (Mon, 22 Oct 2018)
Changed paths:
R env/common/templates/galaxy/config/workflow_schedulers_conf.xml.j2
A env/main/files/galaxy/config/workflow_schedulers_conf.xml
M env/main/group_vars/galaxyjobservers.yml
M env/main/group_vars/galaxyservers/vars.yml
A env/test/files/galaxy/config/workflow_schedulers_conf.xml
M env/test/group_vars/galaxyservers/vars.yml
R env/test/templates/galaxy/config/workflow_schedulers_conf.xml.j2
Log Message:
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Configure workflow schedulers on Main
**NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/
Functionality will be removed from GitHub.com on January 31st, 2019.