- galaxy-commits - lists.galaxyproject.org

[galaxyproject/usegalaxy-playbook] 6e13fe: Additional Blacklight resource selector stuff
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 6e13fe811edcaffbf1ea6f0c0983584d96653993 https://github.com/galaxyproject/usegalaxy-playbook/commit/6e13fe811edcaffb… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/job_resource_params_conf.xml M files/galaxy/test.galaxyproject.org/config/tool_conf.xml M files/galaxy/test.galaxyproject.org/dynamic_rules/blacklight_select.py M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Additional Blacklight resource selector stuff Commit: c397b1a024b0582972e7d34d2a33242941fa1210 https://github.com/galaxyproject/usegalaxy-playbook/commit/c397b1a024b05829… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M roles/galaxyprojectdotorg.pulsar/defaults/main.yml M roles/galaxyprojectdotorg.pulsar/templates/server.ini.j2 Log Message: ----------- Allow setup of dependency_resolvers_conf in pulsar role Commit: af5f1e0f674d779707cdcb370fd324d433dbf028 https://github.com/galaxyproject/usegalaxy-playbook/commit/af5f1e0f674d7797… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M stage/host_vars/login5.stampede.tacc.utexas.edu.yml M stage/host_vars/tg-login2.blacklight.psc.xsede.org.yml Log Message: ----------- More sensible retry options for pulsar Commit: 596ba8fe8d0001da6f5181071c18f57bc68d5f30 https://github.com/galaxyproject/usegalaxy-playbook/commit/596ba8fe8d0001da… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_conf.xml Log Message: ----------- Mutable configs on Test (new assembly tools) Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/21a079f166e5...…

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[galaxyproject/usegalaxy-playbook] 21a079: Dropped Beer-lab (sadly!) and GalaxyIsHiring slide...
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 21a079f166e521dc17ec606bd92a193bb98719aa https://github.com/galaxyproject/usegalaxy-playbook/commit/21a079f166e521dc… Author: Dave Clements <clements(a)Clements-Galaxy.local> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: A files/galaxy/common/static/welcome_img/GCC2015AbstractsOpen.png A files/galaxy/common/static/welcome_img/WST2015.png M templates/galaxy/common/static/welcome.html.j2 Log Message: ----------- Dropped Beer-lab (sadly!) and GalaxyIsHiring slides, and added Tokyo worshop and GCC2015 Abstract submission.k

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[galaxyproject/usegalaxy-playbook] 8e190f: Forgot to have it actually install the dynamic rul...
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 8e190faade7fce536aa0caba45628a9bb3aa1db7 https://github.com/galaxyproject/usegalaxy-playbook/commit/8e190faade7fce53… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M stage/group_vars/galaxyservers.yml Log Message: ----------- Forgot to have it actually install the dynamic rule

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[galaxyproject/usegalaxy-playbook] 67ceb4: Resource selector for Blacklight
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 67ceb45f5af8791e416dc002ab98ab0c074c85df https://github.com/galaxyproject/usegalaxy-playbook/commit/67ceb45f5af8791e… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/job_resource_params_conf.xml A files/galaxy/test.galaxyproject.org/dynamic_rules/blacklight_select.py M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Resource selector for Blacklight

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[galaxyproject/usegalaxy-playbook] 372865: Purge the module env prior to running Blacklight j...
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 372865d98b9cdf125f6eb2425768f7e33ee7e6c3 https://github.com/galaxyproject/usegalaxy-playbook/commit/372865d98b9cdf12… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Purge the module env prior to running Blacklight jobs or else stuff will be output to stderr.

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[galaxyproject/usegalaxy-playbook] fe344a: Enable a trinity-on-blacklight tool on Test (hidde...
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: fe344acad021a66316d37b318f221e709a34e631 https://github.com/galaxyproject/usegalaxy-playbook/commit/fe344acad021a663… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/tool_conf.xml M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Enable a trinity-on-blacklight tool on Test (hidden until I get it actually working).

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[galaxyproject/usegalaxy-playbook] 5ed5ca: Update test to ff13b6fbe8c581df242c96de021272488f3...
by GitHub 19 Mar '15

19 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 5ed5ca21c9507a41a97db880f6bfe422abd57075 https://github.com/galaxyproject/usegalaxy-playbook/commit/5ed5ca21c9507a41… Author: Daniel Blankenberg <dan.blankenberg(a)gmail.com> Date: 2015-03-19 (Thu, 19 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_conf.xml M stage/group_vars/all.yml Log Message: ----------- Update test to ff13b6fbe8c581df242c96de021272488f373f9c.

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[galaxyproject/usegalaxy-playbook] 28f6b1: Update Test tool conf from upstream
by GitHub 18 Mar '15

18 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: 28f6b11c4fb03ea48be5ac9a80b5559d2b6bcafa https://github.com/galaxyproject/usegalaxy-playbook/commit/28f6b11c4fb03ea4… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-18 (Wed, 18 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/tool_conf.xml Log Message: ----------- Update Test tool conf from upstream Commit: 26037b17f99610f0d0b31ca2a19b8f6e060d54cc https://github.com/galaxyproject/usegalaxy-playbook/commit/26037b17f99610f0… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-18 (Wed, 18 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/var/integrated_tool_panel.xml M files/galaxy/test.galaxyproject.org/var/shed_tool_conf.xml Log Message: ----------- Test mutable configs Commit: 05d2c7fbf1952917bc9c1705830ede4258058a29 https://github.com/galaxyproject/usegalaxy-playbook/commit/05d2c7fbf1952917… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-18 (Wed, 18 Mar 2015) Changed paths: M files/galaxy/test.galaxyproject.org/config/nagios_tool_conf.xml M stage/group_vars/galaxyservers.yml M templates/galaxy/test.galaxyproject.org/config/job_conf.xml.j2 Log Message: ----------- Echo tool on Blacklight Compare: https://github.com/galaxyproject/usegalaxy-playbook/compare/f94527c1542c...…

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[galaxyproject/usegalaxy-playbook] f94527: Minor changes for deploying Pulsar on Blacklight.
by GitHub 18 Mar '15

18 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: f94527c1542cde6de47e866372f00054679fb142 https://github.com/galaxyproject/usegalaxy-playbook/commit/f94527c1542cde6d… Author: Galaxy Community User <xcgalaxy(a)tg-login2.blacklight.psc.teragrid.org> Date: 2015-03-18 (Wed, 18 Mar 2015) Changed paths: M stage/group_vars/pulsarservers.yml M stage/host_vars/login5.stampede.tacc.utexas.edu.yml R stage/host_vars/tg-login2.blacklight.psc.xsede.org A stage/host_vars/tg-login2.blacklight.psc.xsede.org.yml Log Message: ----------- Minor changes for deploying Pulsar on Blacklight.

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[galaxyproject/usegalaxy-playbook] ca1ea4: Update pulsar role to 0.3.1
by GitHub 18 Mar '15

18 Mar '15

Branch: refs/heads/master Home: https://github.com/galaxyproject/usegalaxy-playbook Commit: ca1ea41c07fe506aa14736b390826b67ed8b5207 https://github.com/galaxyproject/usegalaxy-playbook/commit/ca1ea41c07fe506a… Author: Nate Coraor <nate(a)bx.psu.edu> Date: 2015-03-18 (Wed, 18 Mar 2015) Changed paths: M roles/galaxyprojectdotorg.pulsar/README.md M roles/galaxyprojectdotorg.pulsar/meta/.galaxy_install_info M roles/galaxyprojectdotorg.pulsar/tasks/main.yml Log Message: ----------- Update pulsar role to 0.3.1

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